RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 HOOK1Q9UJC3 728 aaKnown RBP8.5□□□□□ -1.05
MSH6-211ENST00000606499 GINS2Q9Y248 185 aa8.5□□□□□ -1.05
MSH6-211ENST00000606499 A0A087WZ62 844 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 LRRIQ4A6NIV6 560 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 BIN1O00499 593 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 SLC16A4O15374 487 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 TRAK2O60296 914 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 GPR32O75388 356 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 CSDE1O75534 798 aaKnown RBP8.49□□□□□ -1.05
MSH6-211ENST00000606499 MYL1P05976 194 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 CLTBP09497 229 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 SRGAP2CP0DJJ0 459 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 CKBP12277 381 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 PLS3P13797 630 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 GAP43P17677 238 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 NMT1P30419 496 aaKnown RBP8.49□□□□□ -1.05
MSH6-211ENST00000606499 NAMPTP43490 491 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 NPTX2P47972 431 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 CASP5P51878 434 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 EHHADHQ08426 723 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 MGAT3Q09327 533 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 MXD4Q14582 209 aaPredicted RBP8.49□□□□□ -1.05
MSH6-211ENST00000606499 KMT5BQ4FZB7 885 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 HERC4Q5GLZ8 1057 aaPredicted RBP8.49□□□□□ -1.05
MSH6-211ENST00000606499 CCDC183Q5T5S1 534 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 ZNF618Q5T7W0 954 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 TRAF7Q6Q0C0 670 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 UNC13DQ70J99 1090 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 RSPH3Q86UC2 560 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 CCDC65Q8IXS2 484 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 C7orf61Q8IZ16 206 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 MYCT1Q8N699 235 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 CCDC155Q8N6L0 562 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 RNF149Q8NC42 400 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 SPATA20Q8TB22 786 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 NLRP7Q8WX94 980 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 SMARCE1Q969G3 411 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 IFT74Q96LB3 600 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 SCLT1Q96NL6 688 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 FIZ1Q96SL8 496 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 OSMRQ99650 979 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 FDXACB1Q9BRP7 624 aaPredicted RBP8.49□□□□□ -1.05
MSH6-211ENST00000606499 NOC4LQ9BVI4 516 aaKnown RBP8.49□□□□□ -1.05
MSH6-211ENST00000606499 OSBPL7Q9BZF2 842 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 PPP1R12CQ9BZL4 782 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 ADAMTS10Q9H324 1103 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 HIPK3Q9H422 1215 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 PRDM5Q9NQX1 630 aaPredicted RBP8.49□□□□□ -1.05
MSH6-211ENST00000606499 EXOC1Q9NV70 894 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 TBC1D7Q9P0N9 293 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 LARSQ9P2J5 1176 aaKnown RBP8.49□□□□□ -1.05
MSH6-211ENST00000606499 TBX21Q9UL17 535 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 PCDHA5Q9Y5H7 936 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 CDY2AQ9Y6F7 541 aa8.49□□□□□ -1.05
MSH6-211ENST00000606499 RANBP2P49792 3224 aaKnown RBP8.48□□□□□ -1.05
MSH6-211ENST00000606499 PVALEFA0A1B0GWK0 134 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 TRIM43BA6NCK2 446 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 CCDC169A6NNP5 214 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 K7ENM7 598 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 PITPNM1O00562 1244 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 SMC2O95347 1197 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 CHRNA1P02708 482 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 EDN1P05305 212 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 MYBP10242 640 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 FGFR4P22455 802 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 CYP2C18P33260 490 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 PHKA2P46019 1235 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 NCKAP1LP55160 1127 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 RBL2Q08999 1139 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 DMP1Q13316 513 aaPredicted RBP8.48□□□□□ -1.05
MSH6-211ENST00000606499 TFDP1Q14186 410 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 MBTPS1Q14703 1052 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 PPP2R5AQ15172 486 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 SKOR2Q2VWA4 1001 aaPredicted RBP8.48□□□□□ -1.05
MSH6-211ENST00000606499 ZC2HC1CQ53FD0 456 aaPredicted RBP8.48□□□□□ -1.05
MSH6-211ENST00000606499 FAM26FQ5R3K3 315 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 CDCA2Q69YH5 1023 aaPredicted RBP8.48□□□□□ -1.05
MSH6-211ENST00000606499 ISM2Q6H9L7 571 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 LRRC8DQ7L1W4 858 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 RPAINQ86UA6 219 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 FAM178BQ8IXR5 827 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 ELOA2Q8IYF1 753 aaPredicted RBP8.48□□□□□ -1.05
MSH6-211ENST00000606499 SMYD4Q8IYR2 804 aaPredicted RBP8.48□□□□□ -1.05
MSH6-211ENST00000606499 NME8Q8N427 588 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 DEPTORQ8TB45 409 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 CAGE1Q8TC20 777 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 TMEM40Q8WWA1 233 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 TRIM43Q96BQ3 446 aaPredicted RBP8.48□□□□□ -1.05
MSH6-211ENST00000606499 CELF4Q9BZC1 486 aaKnown RBP8.48□□□□□ -1.05
MSH6-211ENST00000606499 WNT8AQ9H1J5 351 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 MINDY3Q9H8M7 445 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 MRPL44Q9H9J2 332 aaKnown RBP8.48□□□□□ -1.05
MSH6-211ENST00000606499 IFT122Q9HBG6 1241 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 SLC39A2Q9NP94 309 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 KMT5AQ9NQR1 393 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 OLFML3Q9NRN5 406 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 TMEM39AQ9NV64 488 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 KIAA1468Q9P260 1216 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 SEL1LQ9UBV2 794 aa8.48□□□□□ -1.05
MSH6-211ENST00000606499 GDAQ9Y2T3 454 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms