RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 SAFBQ15424 915 aaKnown RBP eCLIP11.92□□□□□ -0.5
TUBE1-210ENST00000604967 AMHR2Q16671 573 aa11.92□□□□□ -0.5
TUBE1-210ENST00000604967 LONRF3Q496Y0 759 aa11.92□□□□□ -0.5
TUBE1-210ENST00000604967 TCEAL5Q5H9L2 206 aa11.92□□□□□ -0.5
TUBE1-210ENST00000604967 FERMT3Q86UX7 667 aa11.92□□□□□ -0.5
TUBE1-210ENST00000604967 KLHL23Q8NBE8 558 aa11.92□□□□□ -0.5
TUBE1-210ENST00000604967 SPPL3Q8TCT6 385 aa11.92□□□□□ -0.5
TUBE1-210ENST00000604967 BSNDQ8WZ55 320 aa11.92□□□□□ -0.5
TUBE1-210ENST00000604967 LPPQ93052 612 aa11.92□□□□□ -0.5
TUBE1-210ENST00000604967 MRPL38Q96DV4 380 aaKnown RBP11.92□□□□□ -0.5
TUBE1-210ENST00000604967 MMTAG2Q9BU76 263 aaKnown RBP11.92□□□□□ -0.5
TUBE1-210ENST00000604967 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.92□□□□□ -0.5
TUBE1-210ENST00000604967 ANKEF1Q9NU02 776 aa11.92□□□□□ -0.5
TUBE1-210ENST00000604967 TYW1Q9NV66 732 aaKnown RBP11.92□□□□□ -0.5
TUBE1-210ENST00000604967 TMEM161AQ9NX61 479 aa11.92□□□□□ -0.5
TUBE1-210ENST00000604967 LMCD1Q9NZU5 365 aa11.92□□□□□ -0.5
TUBE1-210ENST00000604967 PCDHB7Q9Y5E2 793 aa11.92□□□□□ -0.5
TUBE1-210ENST00000604967 BDP1A6H8Y1 2624 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 PLXNA4Q9HCM2 1894 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 C5orf42Q9H799 3197 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.91□□□□□ -0.5
TUBE1-210ENST00000604967 TTLL13PA6NNM8 815 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 GTPBP6O43824 516 aaPredicted RBP11.91□□□□□ -0.5
TUBE1-210ENST00000604967 ST18O60284 1047 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 MARCH6O60337 910 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 EDN1P05305 212 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 GLRA2P23416 452 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 CDC25AP30304 524 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 LTBRP36941 435 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 POLGP54098 1239 aaPredicted RBP11.91□□□□□ -0.5
TUBE1-210ENST00000604967 PTGDRQ13258 359 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 CAPSQ13938 189 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 KCNK18Q7Z418 384 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 ADGRD2Q7Z7M1 963 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 ZNF410Q86VK4 478 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 IGSF22Q8N9C0 903 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 FAM184AQ8NB25 1140 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 LRRC15Q8TF66 581 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 SAMD11Q96NU1 681 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 POLR3CQ9BUI4 534 aaPredicted RBP11.91□□□□□ -0.5
TUBE1-210ENST00000604967 GCOM2Q9BZD3 368 aaPredicted RBP11.91□□□□□ -0.5
TUBE1-210ENST00000604967 ELAC1Q9H777 363 aaKnown RBP11.91□□□□□ -0.5
TUBE1-210ENST00000604967 C1orf112Q9NSG2 853 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 USP20Q9Y2K6 914 aa11.91□□□□□ -0.5
TUBE1-210ENST00000604967 A0A0U1RQF3 1178 aa11.9□□□□□ -0.5
TUBE1-210ENST00000604967 LINC01565O15544 149 aa11.9□□□□□ -0.5
TUBE1-210ENST00000604967 STAG3L1P0CL83 205 aa11.9□□□□□ -0.5
TUBE1-210ENST00000604967 RFC5P40937 340 aa11.9□□□□□ -0.5
TUBE1-210ENST00000604967 PHKA2P46019 1235 aa11.9□□□□□ -0.5
TUBE1-210ENST00000604967 TRAPPC10P48553 1259 aa11.9□□□□□ -0.5
TUBE1-210ENST00000604967 FXR2P51116 673 aaKnown RBP eCLIP11.9□□□□□ -0.5
TUBE1-210ENST00000604967 DLX2Q07687 328 aaPredicted RBP11.9□□□□□ -0.5
TUBE1-210ENST00000604967 HYAL1Q12794 435 aa11.9□□□□□ -0.5
TUBE1-210ENST00000604967 TJAP1Q5JTD0 557 aa11.9□□□□□ -0.5
TUBE1-210ENST00000604967 TMEM173Q86WV6 379 aaPredicted RBP11.9□□□□□ -0.5
TUBE1-210ENST00000604967 RNF169Q8NCN4 708 aa11.9□□□□□ -0.5
TUBE1-210ENST00000604967 HELQQ8TDG4 1101 aa11.9□□□□□ -0.5
TUBE1-210ENST00000604967 ATXN2LQ8WWM7 1075 aaKnown RBP11.9□□□□□ -0.5
TUBE1-210ENST00000604967 SLC7A3Q8WY07 619 aa11.9□□□□□ -0.5
TUBE1-210ENST00000604967 SCLT1Q96NL6 688 aa11.9□□□□□ -0.5
TUBE1-210ENST00000604967 AGPAT5Q9NUQ2 364 aa11.9□□□□□ -0.5
TUBE1-210ENST00000604967 GTF3C3Q9Y5Q9 886 aa11.9□□□□□ -0.5
TUBE1-210ENST00000604967 TCF20Q9UGU0 1960 aaKnown RBP11.9□□□□□ -0.5
TUBE1-210ENST00000604967 B4GALT5O43286 388 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 TSPAN1O60635 241 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 USO1O60763 962 aaKnown RBP11.89□□□□□ -0.51
TUBE1-210ENST00000604967 RB1P06400 928 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 RPA1P27694 616 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 DNM2P50570 870 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 PTENP60484 403 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 ERVFC1P60507 584 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 MRPS5P82675 430 aaKnown RBP11.89□□□□□ -0.51
TUBE1-210ENST00000604967 RBM10P98175 930 aaKnown RBP11.89□□□□□ -0.51
TUBE1-210ENST00000604967 GRIN1Q05586 938 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 MBTD1Q05BQ5 628 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 ORC2Q13416 577 aaPredicted RBP11.89□□□□□ -0.51
TUBE1-210ENST00000604967 SKIV2LQ15477 1246 aaKnown RBP11.89□□□□□ -0.51
TUBE1-210ENST00000604967 AGMOQ6ZNB7 445 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 MAEAQ7L5Y9 396 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 COLGALT1Q8NBJ5 622 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 RNF149Q8NC42 400 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 SMG8Q8ND04 991 aaKnown RBP11.89□□□□□ -0.51
TUBE1-210ENST00000604967 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.89□□□□□ -0.51
TUBE1-210ENST00000604967 BCL7CQ8WUZ0 217 aaPredicted RBP11.89□□□□□ -0.51
TUBE1-210ENST00000604967 PSPC1Q8WXF1 523 aaKnown RBP11.89□□□□□ -0.51
TUBE1-210ENST00000604967 MTRQ99707 1265 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 TRAIPQ9BWF2 469 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 EIF2AQ9BY44 585 aaKnown RBP11.89□□□□□ -0.51
TUBE1-210ENST00000604967 TMEM117Q9H0C3 514 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 POLR3FQ9H1D9 316 aaPredicted RBP11.89□□□□□ -0.51
TUBE1-210ENST00000604967 RNF39Q9H2S5 420 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 UBE2ZQ9H832 354 aaPredicted RBP11.89□□□□□ -0.51
TUBE1-210ENST00000604967 ATP6V0A4Q9HBG4 840 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 TUFT1Q9NNX1 390 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 CD320Q9NPF0 282 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 LRFN2Q9ULH4 789 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 PIN4Q9Y237 131 aaKnown RBP11.89□□□□□ -0.51
TUBE1-210ENST00000604967 PPME1Q9Y570 386 aa11.89□□□□□ -0.51
TUBE1-210ENST00000604967 DKC1O60832 514 aaKnown RBP eCLIP11.88□□□□□ -0.51
TUBE1-210ENST00000604967 ATP2C1P98194 919 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms