RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 HGSNATQ68CP4 663 aa3.32□□□□□ -1.88
VCAM1-205ENST00000603679 FAM169BQ8N8A8 192 aa3.32□□□□□ -1.88
VCAM1-205ENST00000603679 DNERQ8NFT8 737 aa3.32□□□□□ -1.88
VCAM1-205ENST00000603679 ZBTB9Q96C00 473 aa3.32□□□□□ -1.88
VCAM1-205ENST00000603679 TBC1D31Q96DN5 1066 aa3.32□□□□□ -1.88
VCAM1-205ENST00000603679 MOV10L1Q9BXT6 1211 aaKnown RBP3.32□□□□□ -1.88
VCAM1-205ENST00000603679 MRPL4Q9BYD3 311 aaKnown RBP3.32□□□□□ -1.88
VCAM1-205ENST00000603679 ABHD16BQ9H3Z7 469 aa3.32□□□□□ -1.88
VCAM1-205ENST00000603679 SH2D4AQ9H788 454 aa3.32□□□□□ -1.88
VCAM1-205ENST00000603679 SLC38A10Q9HBR0 1119 aa3.32□□□□□ -1.88
VCAM1-205ENST00000603679 TRPV5Q9NQA5 729 aa3.32□□□□□ -1.88
VCAM1-205ENST00000603679 UBP1Q9NZI7 540 aa3.32□□□□□ -1.88
VCAM1-205ENST00000603679 KLF15Q9UIH9 416 aa3.32□□□□□ -1.88
VCAM1-205ENST00000603679 PPP1R9AQ9ULJ8 1098 aa3.32□□□□□ -1.88
VCAM1-205ENST00000603679 ZNF232Q9UNY5 417 aa3.32□□□□□ -1.88
VCAM1-205ENST00000603679 RRP7AQ9Y3A4 280 aaKnown RBP3.32□□□□□ -1.88
VCAM1-205ENST00000603679 MRPS23Q9Y3D9 190 aaKnown RBP3.32□□□□□ -1.88
VCAM1-205ENST00000603679 PTPRBP23467 1997 aa3.32□□□□□ -1.88
VCAM1-205ENST00000603679 ZNF536O15090 1300 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 IPO8O15397 1037 aaKnown RBP3.31□□□□□ -1.88
VCAM1-205ENST00000603679 TLR3O15455 904 aaKnown RBP3.31□□□□□ -1.88
VCAM1-205ENST00000603679 BRINP1O60477 761 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 ELNP15502 786 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 RAB27AP51159 221 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 CCDC92Q53HC0 331 aaPredicted RBP3.31□□□□□ -1.88
VCAM1-205ENST00000603679 TMEM179Q6ZVK1 233 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 CCDC105Q8IYK2 499 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 ZNF295-AS1Q8N0V1 137 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 PPM1KQ8N3J5 372 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 TMEM57Q8N5G2 664 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 ANKK1Q8NFD2 765 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 MAP7D2Q96T17 732 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 MPHOSPH8Q99549 860 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 HERPUD2Q9BSE4 406 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 RANBP17Q9H2T7 1088 aaKnown RBP3.31□□□□□ -1.88
VCAM1-205ENST00000603679 EHMT1Q9H9B1 1298 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 MSRAQ9UJ68 235 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 SH3BP1Q9Y3L3 701 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 SOWAHBA6NEL2 793 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 TIMM44O43615 452 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 MYL3P08590 195 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 SUPT20HL2P0C7V6 817 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 POU3F2P20265 443 aaPredicted RBP3.31□□□□□ -1.88
VCAM1-205ENST00000603679 DDIT3P35638 169 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 SH3BP2P78314 561 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 AIMP1Q12904 312 aaKnown RBP3.31□□□□□ -1.88
VCAM1-205ENST00000603679 GPS2Q13227 327 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 COG2Q14746 738 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 CCDC62Q6P9F0 684 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 LCA5Q86VQ0 697 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 SNX32Q86XE0 403 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 RNF168Q8IYW5 571 aaPredicted RBP3.31□□□□□ -1.88
VCAM1-205ENST00000603679 SMRP1Q8NCR6 262 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 NXPE3Q969Y0 559 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 CCDC47Q96A33 483 aaKnown RBP3.31□□□□□ -1.88
VCAM1-205ENST00000603679 MEIS3Q99687 375 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 LBHD1Q9BQE6 289 aaPredicted RBP3.31□□□□□ -1.88
VCAM1-205ENST00000603679 NIFKQ9BYG3 293 aaKnown RBP3.31□□□□□ -1.88
VCAM1-205ENST00000603679 CSRNP2Q9H175 543 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 PORCNQ9H237 461 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 EPHX3Q9H6B9 360 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 DBNLQ9UJU6 430 aaKnown RBP3.31□□□□□ -1.88
VCAM1-205ENST00000603679 FAM184BQ9ULE4 1060 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 TRIP12Q14669 1992 aaPredicted RBP3.31□□□□□ -1.88
VCAM1-205ENST00000603679 TCF20Q9UGU0 1960 aaKnown RBP3.31□□□□□ -1.88
VCAM1-205ENST00000603679 C10orf142B7Z368 130 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 LILRA1O75019 489 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 BCAR3O75815 825 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 F2P00734 622 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 IL2RAP01589 272 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 IFIT2P09913 472 aaKnown RBP3.31□□□□□ -1.88
VCAM1-205ENST00000603679 TDO2P48775 406 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 MYBPC2Q14324 1141 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 LINC01559Q495D7 138 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 SEZ6Q53EL9 994 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 DMRTA1Q5VZB9 504 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 HERC6Q8IVU3 1022 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 TRIM42Q8IWZ5 723 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 CCDC155Q8N6L0 562 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 MYRIPQ8NFW9 859 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 GATAD2BQ8WXI9 593 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 DDX1Q92499 740 aaKnown RBP3.31□□□□□ -1.88
VCAM1-205ENST00000603679 TRERF1Q96PN7 1200 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 MAP3K14Q99558 947 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 UBE2ZQ9H832 354 aaPredicted RBP3.31□□□□□ -1.88
VCAM1-205ENST00000603679 VCPKMTQ9H867 229 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 TCF7L1Q9HCS4 588 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 PRDM9Q9NQV7 894 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 ZDHHC3Q9NYG2 299 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 ZIM2Q9NZV7 527 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 RABL2AQ9UBK7 228 aaPredicted RBP3.31□□□□□ -1.88
VCAM1-205ENST00000603679 SAMM50Q9Y512 469 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 NRCAMQ92823 1304 aa3.31□□□□□ -1.88
VCAM1-205ENST00000603679 EPOPA6NHQ4 379 aa3.3□□□□□ -1.88
VCAM1-205ENST00000603679 TM4SF5O14894 197 aa3.3□□□□□ -1.88
VCAM1-205ENST00000603679 STAM2O75886 525 aa3.3□□□□□ -1.88
VCAM1-205ENST00000603679 ATE1O95260 518 aa3.3□□□□□ -1.88
VCAM1-205ENST00000603679 CYP2E1P05181 493 aaPredicted RBP3.3□□□□□ -1.88
VCAM1-205ENST00000603679 EDN3P14138 238 aa3.3□□□□□ -1.88
VCAM1-205ENST00000603679 GRB10Q13322 594 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms