RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 CKMT1AP12532 417 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 GBP2P32456 591 aaPredicted RBP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 MAGEA10P43363 369 aaPredicted RBP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 BNIP1Q12981 228 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 PSMD6Q15008 389 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 OASLQ15646 514 aaKnown RBP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 CLPPQ16740 277 aaPredicted RBP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 PLEKHO1Q53GL0 409 aaPredicted RBP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 GPR158Q5T848 1215 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 PCNX4Q63HM2 1172 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 CXorf57Q6NSI4 855 aaKnown RBP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 CNSTQ6PJW8 725 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 CCDC116Q8IYX3 515 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 Q8NFD4 153 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 RTF1Q92541 710 aaKnown RBP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 CCDC114Q96M63 670 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 COG8Q96MW5 612 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 ASB2Q96Q27 587 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 TTPALQ9BTX7 342 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 TSPAN10Q9H1Z9 355 aaPredicted RBP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 ETNK1Q9HBU6 452 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 QPCTLQ9NXS2 382 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 PPARGC1AQ9UBK2 798 aaKnown RBP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 ADAM21Q9UKJ8 722 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 ZNF215Q9UL58 517 aaPredicted RBP5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 AGTPBP1Q9UPW5 1226 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 POLHQ9Y253 713 aa5.48□□□□□ -1.53
SPTBN1-206ENST00000602898 GOLGA6L10A6NI86 522 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 SPDYE3A6NKU9 549 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 TMEM229AB2RXF0 380 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 GOSR1O95249 250 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 SLU7O95391 586 aaKnown RBP5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 TMEM11P17152 192 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 MX2P20592 715 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 LIFRP42702 1097 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 ATP5OP48047 213 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 GCLCP48506 637 aaPredicted RBP5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 CPT1AP50416 773 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 ATP1A2P50993 1020 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 USP4Q13107 963 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 LRRC23Q53EV4 343 aaPredicted RBP5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 CWF19L1Q69YN2 538 aaKnown RBP5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 ARHGAP11AQ6P4F7 1023 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 NXPE4Q6UWF7 544 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 LPCAT2Q7L5N7 544 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 TMTC1Q8IUR5 882 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 SPC24Q8NBT2 197 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 FAM156AQ8NDB6 213 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 ST13P5Q8NFI4 369 aaPredicted RBP5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 PPP1R35Q8TAP8 253 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 RUFY2Q8WXA3 655 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 RRP36Q96EU6 259 aaKnown RBP5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 CEP295NLQ96MC4 621 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 OSBPL9Q96SU4 736 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 PPP1R16BQ96T49 567 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 WDR12Q9GZL7 423 aaKnown RBP5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 LMAN2LQ9H0V9 348 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 CCDC68Q9H2F9 335 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 RRP7BPQ9NSQ0 103 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 AASSQ9UDR5 926 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 PYCARDQ9ULZ3 195 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 GPSM3Q9Y4H4 160 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 EVC2Q86UK5 1308 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 TTC24A2A3L6 582 aaPredicted RBP5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 ADH1CP00326 375 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 KRT1P04264 644 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 PCP11498 1178 aaKnown RBP5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 LPOP22079 712 aaPredicted RBP5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 EVCP57679 992 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 KCNB1Q14721 858 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 SLC10A6Q3KNW5 377 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 ZNF362Q5T0B9 420 aaPredicted RBP5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 PRPF40BQ6NWY9 871 aaKnown RBP5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 RUFY4Q6ZNE9 571 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 NOSTRINQ8IVI9 506 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 AFAP1Q8N556 730 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 SMYD1Q8NB12 490 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 FAM76AQ8TAV0 307 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 SHC3Q92529 594 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 ARHGAP45Q92619 1136 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 SLF1Q9BQI6 1058 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 CARD11Q9BXL7 1154 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 TRIM4Q9C037 500 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 KCNF1Q9H3M0 494 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 TRMT13Q9NUP7 481 aaKnown RBP5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 NKIRAS2Q9NYR9 191 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 AATKQ6ZMQ8 1374 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 E9PCH4 1651 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 GCC2Q8IWJ2 1684 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 E2F8A0AVK6 867 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 SYCE3A1L190 88 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 SOBPA7XYQ1 873 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 RIPK2O43353 540 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 THAP12O43422 761 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 DKC1O60832 514 aaKnown RBP eCLIP5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 PTCD1O75127 700 aaKnown RBP5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 ZNF189O75820 626 aaPredicted RBP5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 RHCEP18577 417 aa5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 WDR4P57081 412 aaKnown RBP5.47□□□□□ -1.53
SPTBN1-206ENST00000602898 ROR2Q01974 943 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms