RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 LINC00271P0C7V0 271 aa24.38■■□□□ 1.49
PPFIA3-208ENST00000602726 RARRES1P49788 294 aa24.38■■□□□ 1.49
PPFIA3-208ENST00000602726 FXR2P51116 673 aaKnown RBP eCLIP24.38■■□□□ 1.49
PPFIA3-208ENST00000602726 RILPL1Q5EBL4 403 aa24.38■■□□□ 1.49
PPFIA3-208ENST00000602726 NACC1Q96RE7 527 aa24.38■■□□□ 1.49
PPFIA3-208ENST00000602726 C11orf84Q9BUA3 381 aaPredicted RBP24.38■■□□□ 1.49
PPFIA3-208ENST00000602726 CHST12Q9NRB3 414 aa24.38■■□□□ 1.49
PPFIA3-208ENST00000602726 DACT1Q9NYF0 836 aa24.38■■□□□ 1.49
PPFIA3-208ENST00000602726 THEGQ9P2T0 379 aa24.38■■□□□ 1.49
PPFIA3-208ENST00000602726 RALGAPA2Q2PPJ7 1873 aa24.38■■□□□ 1.49
PPFIA3-208ENST00000602726 ARID2Q68CP9 1835 aa24.38■■□□□ 1.49
PPFIA3-208ENST00000602726 TBKBP1A7MCY6 615 aa24.37■■□□□ 1.49
PPFIA3-208ENST00000602726 C5orf67F2Z3F1 127 aa24.37■■□□□ 1.49
PPFIA3-208ENST00000602726 RPA1P27694 616 aa24.37■■□□□ 1.49
PPFIA3-208ENST00000602726 CUL4AQ13619 759 aa24.37■■□□□ 1.49
PPFIA3-208ENST00000602726 FAM102BQ5T8I3 360 aa24.37■■□□□ 1.49
PPFIA3-208ENST00000602726 HAUS3Q68CZ6 603 aa24.37■■□□□ 1.49
PPFIA3-208ENST00000602726 CATSPER4Q7RTX7 472 aa24.37■■□□□ 1.49
PPFIA3-208ENST00000602726 FERMT3Q86UX7 667 aa24.37■■□□□ 1.49
PPFIA3-208ENST00000602726 MRPL38Q96DV4 380 aaKnown RBP24.37■■□□□ 1.49
PPFIA3-208ENST00000602726 RAB34Q9BZG1 259 aa24.37■■□□□ 1.49
PPFIA3-208ENST00000602726 IFT122Q9HBG6 1241 aa24.37■■□□□ 1.49
PPFIA3-208ENST00000602726 XPNPEP1Q9NQW7 623 aa24.37■■□□□ 1.49
PPFIA3-208ENST00000602726 LRWD1Q9UFC0 647 aa24.37■■□□□ 1.49
PPFIA3-208ENST00000602726 LAD1O00515 517 aa24.36■■□□□ 1.49
PPFIA3-208ENST00000602726 FGFR1P11362 822 aa24.36■■□□□ 1.49
PPFIA3-208ENST00000602726 PDIA5Q14554 519 aa24.36■■□□□ 1.49
PPFIA3-208ENST00000602726 MXD4Q14582 209 aaPredicted RBP24.36■■□□□ 1.49
PPFIA3-208ENST00000602726 SRGAP1Q7Z6B7 1085 aa24.36■■□□□ 1.49
PPFIA3-208ENST00000602726 ECHDC2Q86YB7 292 aa24.36■■□□□ 1.49
PPFIA3-208ENST00000602726 RNF149Q8NC42 400 aa24.36■■□□□ 1.49
PPFIA3-208ENST00000602726 RNF169Q8NCN4 708 aa24.36■■□□□ 1.49
PPFIA3-208ENST00000602726 PLVAPQ9BX97 442 aa24.36■■□□□ 1.49
PPFIA3-208ENST00000602726 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.36■■□□□ 1.49
PPFIA3-208ENST00000602726 PIN4Q9Y237 131 aaKnown RBP24.36■■□□□ 1.49
PPFIA3-208ENST00000602726 REV3LO60673 3130 aa24.35■■□□□ 1.49
PPFIA3-208ENST00000602726 A0A0U1RQF3 1178 aa24.35■■□□□ 1.49
PPFIA3-208ENST00000602726 HOXA2O43364 376 aa24.35■■□□□ 1.49
PPFIA3-208ENST00000602726 SPOUT1Q5T280 376 aaKnown RBP24.35■■□□□ 1.49
PPFIA3-208ENST00000602726 POTEGQ6S5H5 508 aa24.35■■□□□ 1.49
PPFIA3-208ENST00000602726 ATXN2LQ8WWM7 1075 aaKnown RBP24.35■■□□□ 1.49
PPFIA3-208ENST00000602726 DBR1Q9UK59 544 aaKnown RBP24.35■■□□□ 1.49
PPFIA3-208ENST00000602726 STK24Q9Y6E0 443 aa24.35■■□□□ 1.49
PPFIA3-208ENST00000602726 CUL9Q8IWT3 2517 aa24.35■■□□□ 1.49
PPFIA3-208ENST00000602726 USO1O60763 962 aaKnown RBP24.34■■□□□ 1.49
PPFIA3-208ENST00000602726 CCT6AP40227 531 aaKnown RBP24.34■■□□□ 1.49
PPFIA3-208ENST00000602726 PHKA2P46019 1235 aa24.34■■□□□ 1.49
PPFIA3-208ENST00000602726 TFDP1Q14186 410 aa24.34■■□□□ 1.49
PPFIA3-208ENST00000602726 TWF2Q6IBS0 349 aaKnown RBP24.34■■□□□ 1.49
PPFIA3-208ENST00000602726 DTHD1Q6ZMT9 781 aa24.34■■□□□ 1.49
PPFIA3-208ENST00000602726 ABI1Q8IZP0 508 aa24.34■■□□□ 1.49
PPFIA3-208ENST00000602726 EOMESO95936 686 aa24.33■■□□□ 1.49
PPFIA3-208ENST00000602726 MUTP22033 750 aa24.33■■□□□ 1.49
PPFIA3-208ENST00000602726 PRPHP41219 470 aa24.33■■□□□ 1.49
PPFIA3-208ENST00000602726 TMEM117Q9H0C3 514 aa24.33■■□□□ 1.49
PPFIA3-208ENST00000602726 FNDC1Q4ZHG4 1894 aaPredicted RBP24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 ARHGEF35A5YM69 484 aa24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 DLL1O00548 723 aa24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 SKIP12755 728 aa24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 PDCP20941 246 aa24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 ARL2P36404 184 aa24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 MRPS5P82675 430 aaKnown RBP24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 TIGD5Q53EQ6 642 aa24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 NAALADL2Q58DX5 795 aa24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 IGSF22Q8N9C0 903 aa24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 MCPH1Q8NEM0 835 aa24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 ASAP3Q8TDY4 903 aa24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 SNX29Q8TEQ0 813 aa24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 P2RX5Q93086 422 aa24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 TRAIPQ9BWF2 469 aa24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 LMAN2LQ9H0V9 348 aa24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 POLR3FQ9H1D9 316 aaPredicted RBP24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 MINDY3Q9H8M7 445 aa24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 AAASQ9NRG9 546 aa24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 AGPAT5Q9NUQ2 364 aa24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 COG5Q9UP83 839 aa24.32■■□□□ 1.48
PPFIA3-208ENST00000602726 GRM6O15303 877 aa24.31■■□□□ 1.48
PPFIA3-208ENST00000602726 MAEAQ7L5Y9 396 aa24.31■■□□□ 1.48
PPFIA3-208ENST00000602726 ZNF598Q86UK7 904 aaKnown RBP24.31■■□□□ 1.48
PPFIA3-208ENST00000602726 ALG13Q9NP73 1137 aaKnown RBP24.31■■□□□ 1.48
PPFIA3-208ENST00000602726 RNF19AQ9NV58 838 aa24.31■■□□□ 1.48
PPFIA3-208ENST00000602726 TYW1Q9NV66 732 aaKnown RBP24.31■■□□□ 1.48
PPFIA3-208ENST00000602726 PLAGL2Q9UPG8 496 aa24.31■■□□□ 1.48
PPFIA3-208ENST00000602726 PCDHB12Q9Y5F1 795 aa24.31■■□□□ 1.48
PPFIA3-208ENST00000602726 MYO7AQ13402 2215 aa24.31■■□□□ 1.48
PPFIA3-208ENST00000602726 ERLIN2O94905 339 aa24.3■■□□□ 1.48
PPFIA3-208ENST00000602726 GLRA2P23416 452 aa24.3■■□□□ 1.48
PPFIA3-208ENST00000602726 PTENP60484 403 aa24.3■■□□□ 1.48
PPFIA3-208ENST00000602726 ATP2C1P98194 919 aaPredicted RBP24.3■■□□□ 1.48
PPFIA3-208ENST00000602726 POU5F1BQ06416 359 aa24.3■■□□□ 1.48
PPFIA3-208ENST00000602726 CAPSQ13938 189 aa24.3■■□□□ 1.48
PPFIA3-208ENST00000602726 IL17AQ16552 155 aa24.3■■□□□ 1.48
PPFIA3-208ENST00000602726 ECM1Q16610 540 aa24.3■■□□□ 1.48
PPFIA3-208ENST00000602726 TJAP1Q5JTD0 557 aa24.3■■□□□ 1.48
PPFIA3-208ENST00000602726 KRT79Q5XKE5 535 aa24.3■■□□□ 1.48
PPFIA3-208ENST00000602726 PADI6Q6TGC4 694 aa24.3■■□□□ 1.48
PPFIA3-208ENST00000602726 KLHL23Q8NBE8 558 aa24.3■■□□□ 1.48
PPFIA3-208ENST00000602726 HLA-CQ95604 372 aa24.3■■□□□ 1.48
PPFIA3-208ENST00000602726 CASD1Q96PB1 797 aa24.3■■□□□ 1.48
PPFIA3-208ENST00000602726 ASB2Q96Q27 587 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms