RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 POTECB2RU33 542 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 CCND1P24385 295 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 CAP2P40123 477 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 SESN3P58005 492 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 PABPC4Q13310 644 aaKnown RBP eCLIP16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 TDRD12Q587J7 1177 aaKnown RBP16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 CDKAL1Q5VV42 579 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 POTEBQ6S5H4 581 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 BCAS3Q9H6U6 928 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 TMBIM4Q9HC24 238 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 SLC5A4Q9NY91 659 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 MAGEA1P43355 309 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 KRT79Q5XKE5 535 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 CASKIN2Q8WXE0 1202 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 ANKS1AQ92625 1134 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 WNK4Q96J92 1243 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 LBHD1Q9BQE6 289 aaPredicted RBP16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 GORASP1Q9BQQ3 440 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 ECT2Q9H8V3 914 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 BRCA2P51587 3418 aa16.61■□□□□ 0.25
PPFIA3-206ENST00000602655 RNF8O76064 485 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 PLEKP08567 350 aaPredicted RBP16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 MTIF2P46199 727 aaKnown RBP16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 DPYDQ12882 1025 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 ARMC9Q7Z3E5 817 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 LRRC15Q8TF66 581 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 CNOT8Q9UFF9 292 aaKnown RBP16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 POTEFA5A3E0 1075 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 POTEIP0CG38 1075 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 POTEGQ6S5H5 508 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 POTEEQ6S8J3 1075 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 KCNK18Q7Z418 384 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 GLIS3Q8NEA6 775 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 UHMK1Q8TAS1 419 aaKnown RBP16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 P3H4Q92791 437 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.6■□□□□ 0.256e-6■■■■■ 48.1
PPFIA3-206ENST00000602655 DISC1Q9NRI5 854 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 NYAP2Q9P242 653 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 ITIH6Q6UXX5 1313 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 COL24A1Q17RW2 1714 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 DNAH12Q6ZR08 3092 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 DCDC2CA8MYV0 355 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 FTCDO95954 541 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 NQO1P15559 274 aaKnown RBP16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 KLK7P49862 253 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 TRPM8Q7Z2W7 1104 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 TPH2Q8IWU9 490 aa16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 PACSIN2Q9UNF0 486 aaPredicted RBP16.6■□□□□ 0.25
PPFIA3-206ENST00000602655 ROBO3Q96MS0 1386 aa16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 NFIBO00712 420 aa16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 CREB3O43889 395 aa16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 CNGA1P29973 690 aa16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 ABL2P42684 1182 aa16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 CTTNQ14247 550 aaKnown RBP16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 MB21D1Q8N884 522 aa16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 MGARPQ8TDB4 240 aa16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 LRRC45Q96CN5 670 aa16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 CCDC88AQ3V6T2 1871 aa16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 PPP1R3GB7ZBB8 358 aa16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 UBOX5O94941 541 aa16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 MMEP08473 750 aa16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 HSD17B3P37058 310 aa16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 ARHGAP4P98171 946 aa16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 CCDC38Q502W7 563 aa16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 LACTB2Q53H82 288 aaPredicted RBP16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 AGBL3Q8NEM8 1001 aa16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 WHAMMQ8TF30 809 aa16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 MMRN2Q9H8L6 949 aa16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 USH1CQ9Y6N9 552 aa16.59■□□□□ 0.25
PPFIA3-206ENST00000602655 CFAP73A6NFT4 308 aa16.58■□□□□ 0.25
PPFIA3-206ENST00000602655 RPN1P04843 607 aaKnown RBP16.58■□□□□ 0.25
PPFIA3-206ENST00000602655 ASNSP08243 561 aa16.58■□□□□ 0.25
PPFIA3-206ENST00000602655 PTGER2P43116 358 aa16.58■□□□□ 0.25
PPFIA3-206ENST00000602655 RNF220Q5VTB9 566 aa16.58■□□□□ 0.25
PPFIA3-206ENST00000602655 TATDN1Q6P1N9 297 aa16.58■□□□□ 0.25
PPFIA3-206ENST00000602655 WDR59Q6PJI9 974 aa16.58■□□□□ 0.25
PPFIA3-206ENST00000602655 RBM41Q96IZ5 413 aaKnown RBP16.58■□□□□ 0.25
PPFIA3-206ENST00000602655 ABCF3Q9NUQ8 709 aa16.58■□□□□ 0.25
PPFIA3-206ENST00000602655 ABCB11O95342 1321 aa16.58■□□□□ 0.25
PPFIA3-206ENST00000602655 COL4A5P29400 1685 aa16.58■□□□□ 0.24
PPFIA3-206ENST00000602655 IGKV6D-41A0A0C4DH26 115 aa16.58■□□□□ 0.24
PPFIA3-206ENST00000602655 RAD23BP54727 409 aa16.58■□□□□ 0.24
PPFIA3-206ENST00000602655 RASIP1Q5U651 963 aa16.58■□□□□ 0.24
PPFIA3-206ENST00000602655 LDHDQ86WU2 507 aa16.58■□□□□ 0.24
PPFIA3-206ENST00000602655 TAF4BQ92750 862 aa16.58■□□□□ 0.24
PPFIA3-206ENST00000602655 DDX23Q9BUQ8 820 aaKnown RBP16.58■□□□□ 0.24
PPFIA3-206ENST00000602655 TCEAL9Q9UHQ7 104 aa16.58■□□□□ 0.24
PPFIA3-206ENST00000602655 MYO3BQ8WXR4 1341 aa16.58■□□□□ 0.24
PPFIA3-206ENST00000602655 ABCD1P33897 745 aa16.58■□□□□ 0.24
PPFIA3-206ENST00000602655 RFC5P40937 340 aa16.58■□□□□ 0.24
PPFIA3-206ENST00000602655 SYT17Q9BSW7 474 aa16.58■□□□□ 0.24
PPFIA3-206ENST00000602655 PNMA2Q9UL42 364 aa16.58■□□□□ 0.24
PPFIA3-206ENST00000602655 CNTNAP1P78357 1384 aa16.58■□□□□ 0.24
PPFIA3-206ENST00000602655 TESPA1A2RU30 521 aaPredicted RBP16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 BMP15O95972 392 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 GHRP10912 638 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 GCLCP48506 637 aaPredicted RBP16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 EHHADHQ08426 723 aa16.57■□□□□ 0.24
PPFIA3-206ENST00000602655 C9orf131Q5VYM1 1079 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms