RNA–Protein interactions for RNA: ENST00000602222.5

SMG9-213, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-213ENST00000602222 XBP1P17861 261 aa17.01■□□□□ 0.31
SMG9-213ENST00000602222 PPM1AP35813 382 aa17.01■□□□□ 0.31
SMG9-213ENST00000602222 KCNC3Q14003 757 aa17.01■□□□□ 0.31
SMG9-213ENST00000602222 LETM2Q2VYF4 491 aa17.01■□□□□ 0.31
SMG9-213ENST00000602222 CLLU1OSQ5K130 101 aa17.01■□□□□ 0.31
SMG9-213ENST00000602222 NEK8Q86SG6 692 aa17.01■□□□□ 0.31
SMG9-213ENST00000602222 ABI1Q8IZP0 508 aa17.01■□□□□ 0.31
SMG9-213ENST00000602222 ZNF558Q96NG5 402 aa17.01■□□□□ 0.31
SMG9-213ENST00000602222 SCLT1Q96NL6 688 aa17.01■□□□□ 0.31
SMG9-213ENST00000602222 INO80BQ9C086 356 aaPredicted RBP17.01■□□□□ 0.31
SMG9-213ENST00000602222 NGRNQ9NPE2 291 aaKnown RBP17.01■□□□□ 0.31
SMG9-213ENST00000602222 SUCLA2Q9P2R7 463 aaPredicted RBP17.01■□□□□ 0.31
SMG9-213ENST00000602222 TPCN1Q9ULQ1 816 aa17.01■□□□□ 0.31
SMG9-213ENST00000602222 PPME1Q9Y570 386 aa17.01■□□□□ 0.31
SMG9-213ENST00000602222 MUC6Q6W4X9 2439 aa17.01■□□□□ 0.31
SMG9-213ENST00000602222 PIEZO1Q92508 2521 aa17■□□□□ 0.31
SMG9-213ENST00000602222 A0A087WZ62 844 aa17■□□□□ 0.31
SMG9-213ENST00000602222 PER2O15055 1255 aa17■□□□□ 0.31
SMG9-213ENST00000602222 DKC1O60832 514 aaKnown RBP eCLIP17■□□□□ 0.31
SMG9-213ENST00000602222 FGFR4P22455 802 aa17■□□□□ 0.31
SMG9-213ENST00000602222 QARSP47897 775 aaKnown RBP17■□□□□ 0.31
SMG9-213ENST00000602222 HERC4Q5GLZ8 1057 aaPredicted RBP17■□□□□ 0.31
SMG9-213ENST00000602222 VN1R2Q8NFZ6 395 aa17■□□□□ 0.31
SMG9-213ENST00000602222 NAP1L4Q99733 375 aaKnown RBP17■□□□□ 0.31
SMG9-213ENST00000602222 FDXACB1Q9BRP7 624 aaPredicted RBP17■□□□□ 0.31
SMG9-213ENST00000602222 PLXNA4Q9HCM2 1894 aa17■□□□□ 0.31
SMG9-213ENST00000602222 SPG21Q9NZD8 308 aa17■□□□□ 0.31
SMG9-213ENST00000602222 BARX2Q9UMQ3 279 aaPredicted RBP17■□□□□ 0.31
SMG9-213ENST00000602222 LOC730098B7Z3J9 87 aa16.99■□□□□ 0.31
SMG9-213ENST00000602222 CSDE1O75534 798 aaKnown RBP16.99■□□□□ 0.31
SMG9-213ENST00000602222 CTDNEP1O95476 244 aa16.99■□□□□ 0.31
SMG9-213ENST00000602222 P4HBP07237 508 aaKnown RBP16.99■□□□□ 0.31
SMG9-213ENST00000602222 SKIP12755 728 aa16.99■□□□□ 0.31
SMG9-213ENST00000602222 SFPQP23246 707 aaKnown RBP eCLIP16.99■□□□□ 0.31
SMG9-213ENST00000602222 PHKA2P46019 1235 aa16.99■□□□□ 0.31
SMG9-213ENST00000602222 KRT17Q04695 432 aa16.99■□□□□ 0.31
SMG9-213ENST00000602222 CBX2Q14781 532 aaPredicted RBP16.99■□□□□ 0.31
SMG9-213ENST00000602222 ANKRD1Q15327 319 aa16.99■□□□□ 0.31
SMG9-213ENST00000602222 EXOC8Q8IYI6 725 aa16.99■□□□□ 0.31
SMG9-213ENST00000602222 SUSD6Q92537 303 aa16.99■□□□□ 0.31
SMG9-213ENST00000602222 HAS1Q92839 578 aa16.99■□□□□ 0.31
SMG9-213ENST00000602222 SH2D3AQ9BRG2 576 aa16.99■□□□□ 0.31
SMG9-213ENST00000602222 MRPL9Q9BYD2 267 aaKnown RBP16.99■□□□□ 0.31
SMG9-213ENST00000602222 CYP26B1Q9NR63 512 aa16.99■□□□□ 0.31
SMG9-213ENST00000602222 USP15Q9Y4E8 981 aaPredicted RBP16.99■□□□□ 0.31
SMG9-213ENST00000602222 C5orf42Q9H799 3197 aa16.98■□□□□ 0.31
SMG9-213ENST00000602222 CARNS1A5YM72 827 aa16.98■□□□□ 0.31
SMG9-213ENST00000602222 ZNF623O75123 536 aa16.98■□□□□ 0.31
SMG9-213ENST00000602222 EPHA7Q15375 998 aa16.98■□□□□ 0.31
SMG9-213ENST00000602222 RHPN2Q8IUC4 686 aa16.98■□□□□ 0.31
SMG9-213ENST00000602222 RNF135Q8IUD6 432 aa16.98■□□□□ 0.31
SMG9-213ENST00000602222 C4orf19Q8IY42 314 aa16.98■□□□□ 0.31
SMG9-213ENST00000602222 SLC39A11Q8N1S5 342 aa16.98■□□□□ 0.31
SMG9-213ENST00000602222 RNF169Q8NCN4 708 aa16.98■□□□□ 0.31
SMG9-213ENST00000602222 HELQQ8TDG4 1101 aa16.98■□□□□ 0.31
SMG9-213ENST00000602222 OXER1Q8TDS5 423 aa16.98■□□□□ 0.31
SMG9-213ENST00000602222 WASF1Q92558 559 aa16.98■□□□□ 0.31
SMG9-213ENST00000602222 TCF25Q9BQ70 676 aa16.98■□□□□ 0.31
SMG9-213ENST00000602222 DHX33Q9H6R0 707 aaKnown RBP16.98■□□□□ 0.31
SMG9-213ENST00000602222 GJB4Q9NTQ9 266 aa16.98■□□□□ 0.31
SMG9-213ENST00000602222 ORC3Q9UBD5 711 aaPredicted RBP16.98■□□□□ 0.31
SMG9-213ENST00000602222 CCNT1O60563 726 aaKnown RBP16.97■□□□□ 0.31
SMG9-213ENST00000602222 NEFLP07196 543 aa16.97■□□□□ 0.31
SMG9-213ENST00000602222 NPEPPSP55786 919 aa16.97■□□□□ 0.31
SMG9-213ENST00000602222 PLPP4Q5VZY2 271 aa16.97■□□□□ 0.31
SMG9-213ENST00000602222 PLA2G4FQ68DD2 849 aa16.97■□□□□ 0.31
SMG9-213ENST00000602222 PIK3AP1Q6ZUJ8 805 aa16.97■□□□□ 0.31
SMG9-213ENST00000602222 PHF7Q9BWX1 381 aaPredicted RBP16.97■□□□□ 0.31
SMG9-213ENST00000602222 S1PR5Q9H228 398 aa16.97■□□□□ 0.31
SMG9-213ENST00000602222 IFT122Q9HBG6 1241 aa16.97■□□□□ 0.31
SMG9-213ENST00000602222 ENTPD7Q9NQZ7 604 aa16.97■□□□□ 0.31
SMG9-213ENST00000602222 WRAP73Q9P2S5 460 aaPredicted RBP16.97■□□□□ 0.31
SMG9-213ENST00000602222 MUTYHQ9UIF7 546 aa16.97■□□□□ 0.31
SMG9-213ENST00000602222 HIDE1A8MVS5 230 aa16.96■□□□□ 0.31
SMG9-213ENST00000602222 SRGAP2BP0DMP2 458 aa16.96■□□□□ 0.31
SMG9-213ENST00000602222 FDPSP14324 419 aaKnown RBP16.96■□□□□ 0.31
SMG9-213ENST00000602222 PBX3P40426 434 aa16.96■□□□□ 0.31
SMG9-213ENST00000602222 RFC5P40937 340 aa16.96■□□□□ 0.31
SMG9-213ENST00000602222 RAB27AP51159 221 aa16.96■□□□□ 0.31
SMG9-213ENST00000602222 AK2P54819 239 aa16.96■□□□□ 0.31
SMG9-213ENST00000602222 RBM10P98175 930 aaKnown RBP16.96■□□□□ 0.31
SMG9-213ENST00000602222 SPIRE1Q08AE8 756 aa16.96■□□□□ 0.31
SMG9-213ENST00000602222 EARS2Q5JPH6 523 aaKnown RBP16.96■□□□□ 0.31
SMG9-213ENST00000602222 TWF2Q6IBS0 349 aaKnown RBP16.96■□□□□ 0.31
SMG9-213ENST00000602222 TMC7Q7Z402 723 aa16.96■□□□□ 0.31
SMG9-213ENST00000602222 KSR1Q8IVT5 923 aa16.96■□□□□ 0.31
SMG9-213ENST00000602222 MRPL43Q8N983 215 aaKnown RBP16.96■□□□□ 0.31
SMG9-213ENST00000602222 ZNF579Q8NAF0 562 aaKnown RBP16.96■□□□□ 0.31
SMG9-213ENST00000602222 SLC7A3Q8WY07 619 aa16.96■□□□□ 0.31
SMG9-213ENST00000602222 TNFRSF25Q93038 417 aa16.96■□□□□ 0.31
SMG9-213ENST00000602222 CEP170P1Q96L14 293 aa16.96■□□□□ 0.31
SMG9-213ENST00000602222 FAM105AQ9NUU6 356 aa16.96■□□□□ 0.31
SMG9-213ENST00000602222 COL4A3BPQ9Y5P4 624 aa16.96■□□□□ 0.31
SMG9-213ENST00000602222 GAS2O43903 313 aaKnown RBP16.95■□□□□ 0.3
SMG9-213ENST00000602222 HOXB8P17481 243 aaPredicted RBP16.95■□□□□ 0.3
SMG9-213ENST00000602222 HOXD11P31277 338 aaPredicted RBP16.95■□□□□ 0.3
SMG9-213ENST00000602222 ALDH7A1P49419 539 aaKnown RBP16.95■□□□□ 0.3
SMG9-213ENST00000602222 BCAR1P56945 870 aa16.95■□□□□ 0.3
SMG9-213ENST00000602222 ERICH6BQ5W0A0 696 aa16.95■□□□□ 0.3
SMG9-213ENST00000602222 ANKRD54Q6NXT1 300 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms