RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 PRUNE2Q8WUY3 3088 aa18.61■□□□□ 0.57
SSBP4-213ENST00000602088 EPOPA6NHQ4 379 aa18.6■□□□□ 0.57
SSBP4-213ENST00000602088 RFXAPO00287 272 aa18.6■□□□□ 0.57
SSBP4-213ENST00000602088 HSP90AA1P07900 732 aaKnown RBP18.6■□□□□ 0.57
SSBP4-213ENST00000602088 SFPQP23246 707 aaKnown RBP eCLIP18.6■□□□□ 0.57
SSBP4-213ENST00000602088 POU5F1BQ06416 359 aa18.6■□□□□ 0.57
SSBP4-213ENST00000602088 SF3A1Q15459 793 aaKnown RBP18.6■□□□□ 0.57
SSBP4-213ENST00000602088 SRGAP1Q7Z6B7 1085 aa18.6■□□□□ 0.57
SSBP4-213ENST00000602088 RNF149Q8NC42 400 aa18.6■□□□□ 0.57
SSBP4-213ENST00000602088 CHST12Q9NRB3 414 aa18.6■□□□□ 0.57
SSBP4-213ENST00000602088 RNF216Q9NWF9 866 aaPredicted RBP18.6■□□□□ 0.57
SSBP4-213ENST00000602088 LRFN2Q9ULH4 789 aa18.6■□□□□ 0.57
SSBP4-213ENST00000602088 PCDHB7Q9Y5E2 793 aa18.6■□□□□ 0.57
SSBP4-213ENST00000602088 ADGRA3Q8IWK6 1321 aa18.59■□□□□ 0.57
SSBP4-213ENST00000602088 ARHGEF35A5YM69 484 aa18.59■□□□□ 0.57
SSBP4-213ENST00000602088 FAM173BQ6P4H8 233 aa18.59■□□□□ 0.57
SSBP4-213ENST00000602088 PADI6Q6TGC4 694 aa18.59■□□□□ 0.57
SSBP4-213ENST00000602088 CATSPER4Q7RTX7 472 aa18.59■□□□□ 0.57
SSBP4-213ENST00000602088 FIBCD1Q8N539 461 aa18.59■□□□□ 0.57
SSBP4-213ENST00000602088 MCPH1Q8NEM0 835 aa18.59■□□□□ 0.57
SSBP4-213ENST00000602088 ASAP3Q8TDY4 903 aa18.59■□□□□ 0.57
SSBP4-213ENST00000602088 C17orf80Q9BSJ5 609 aa18.59■□□□□ 0.57
SSBP4-213ENST00000602088 BHMT2Q9H2M3 363 aa18.59■□□□□ 0.57
SSBP4-213ENST00000602088 ZSCAN16Q9H4T2 348 aaPredicted RBP18.59■□□□□ 0.57
SSBP4-213ENST00000602088 ELAC1Q9H777 363 aaKnown RBP18.59■□□□□ 0.57
SSBP4-213ENST00000602088 MINDY3Q9H8M7 445 aa18.59■□□□□ 0.57
SSBP4-213ENST00000602088 TMEM161AQ9NX61 479 aa18.59■□□□□ 0.57
SSBP4-213ENST00000602088 MTUS1Q9ULD2 1270 aa18.59■□□□□ 0.57
SSBP4-213ENST00000602088 CLIC4Q9Y696 253 aa18.59■□□□□ 0.57
SSBP4-213ENST00000602088 REV3LO60673 3130 aa18.58■□□□□ 0.57
SSBP4-213ENST00000602088 E9PMD0 336 aa18.58■□□□□ 0.56
SSBP4-213ENST00000602088 CYP11B2P19099 503 aa18.58■□□□□ 0.56
SSBP4-213ENST00000602088 GLRA2P23416 452 aa18.58■□□□□ 0.56
SSBP4-213ENST00000602088 PHKA2P46019 1235 aa18.58■□□□□ 0.56
SSBP4-213ENST00000602088 PTENP60484 403 aa18.58■□□□□ 0.56
SSBP4-213ENST00000602088 CAPSQ13938 189 aa18.58■□□□□ 0.56
SSBP4-213ENST00000602088 TFDP1Q14186 410 aa18.58■□□□□ 0.56
SSBP4-213ENST00000602088 BTG3Q14201 252 aaPredicted RBP18.58■□□□□ 0.56
SSBP4-213ENST00000602088 HYIQ5T013 277 aa18.58■□□□□ 0.56
SSBP4-213ENST00000602088 MAEAQ7L5Y9 396 aa18.58■□□□□ 0.56
SSBP4-213ENST00000602088 IFNLR1Q8IU57 520 aaPredicted RBP18.58■□□□□ 0.56
SSBP4-213ENST00000602088 MAFAQ8NHW3 353 aaPredicted RBP18.58■□□□□ 0.56
SSBP4-213ENST00000602088 AK8Q96MA6 479 aa18.58■□□□□ 0.56
SSBP4-213ENST00000602088 SAMD11Q96NU1 681 aa18.58■□□□□ 0.56
SSBP4-213ENST00000602088 POLR3FQ9H1D9 316 aaPredicted RBP18.58■□□□□ 0.56
SSBP4-213ENST00000602088 GPRC5CQ9NQ84 441 aa18.58■□□□□ 0.56
SSBP4-213ENST00000602088 DNM3Q9UQ16 869 aa18.58■□□□□ 0.56
SSBP4-213ENST00000602088 A0A0U1RQF3 1178 aa18.57■□□□□ 0.56
SSBP4-213ENST00000602088 EYA4O95677 639 aa18.57■□□□□ 0.56
SSBP4-213ENST00000602088 LINC00271P0C7V0 271 aa18.57■□□□□ 0.56
SSBP4-213ENST00000602088 PDIA4P13667 645 aaKnown RBP18.57■□□□□ 0.56
SSBP4-213ENST00000602088 POU3F3P20264 500 aaPredicted RBP18.57■□□□□ 0.56
SSBP4-213ENST00000602088 IBSPP21815 317 aaPredicted RBP18.57■□□□□ 0.56
SSBP4-213ENST00000602088 IGFBP4P22692 258 aa18.57■□□□□ 0.56
SSBP4-213ENST00000602088 PTPAQ15257 358 aa18.57■□□□□ 0.56
SSBP4-213ENST00000602088 ECHDC2Q86YB7 292 aa18.57■□□□□ 0.56
SSBP4-213ENST00000602088 CMTR2Q8IYT2 770 aaKnown RBP18.57■□□□□ 0.56
SSBP4-213ENST00000602088 KCTD17Q8N5Z5 321 aa18.57■□□□□ 0.56
SSBP4-213ENST00000602088 TRAIPQ9BWF2 469 aa18.57■□□□□ 0.56
SSBP4-213ENST00000602088 DACT1Q9NYF0 836 aa18.57■□□□□ 0.56
SSBP4-213ENST00000602088 LPXNO60711 386 aa18.56■□□□□ 0.56
SSBP4-213ENST00000602088 GATMP50440 423 aa18.56■□□□□ 0.56
SSBP4-213ENST00000602088 GRB10Q13322 594 aa18.56■□□□□ 0.56
SSBP4-213ENST00000602088 EPC2Q52LR7 807 aa18.56■□□□□ 0.56
SSBP4-213ENST00000602088 FAM102BQ5T8I3 360 aa18.56■□□□□ 0.56
SSBP4-213ENST00000602088 KCNK18Q7Z418 384 aa18.56■□□□□ 0.56
SSBP4-213ENST00000602088 TMEM192Q8IY95 271 aa18.56■□□□□ 0.56
SSBP4-213ENST00000602088 CLP1Q92989 425 aaKnown RBP18.56■□□□□ 0.56
SSBP4-213ENST00000602088 PNMA5Q96PV4 448 aa18.56■□□□□ 0.56
SSBP4-213ENST00000602088 NFKBIZQ9BYH8 718 aa18.56■□□□□ 0.56
SSBP4-213ENST00000602088 AGPAT5Q9NUQ2 364 aa18.56■□□□□ 0.56
SSBP4-213ENST00000602088 PIN4Q9Y237 131 aaKnown RBP18.56■□□□□ 0.56
SSBP4-213ENST00000602088 EOMESO95936 686 aa18.55■□□□□ 0.56
SSBP4-213ENST00000602088 HOXA11P31270 313 aaPredicted RBP18.55■□□□□ 0.56
SSBP4-213ENST00000602088 LONP1P36776 959 aaKnown RBP18.55■□□□□ 0.56
SSBP4-213ENST00000602088 GRIN1Q05586 938 aa18.55■□□□□ 0.56
SSBP4-213ENST00000602088 PCBP1Q15365 356 aaKnown RBP eCLIP18.55■□□□□ 0.565e-7■■■□□ 17.8
SSBP4-213ENST00000602088 ZRSR1Q15695 479 aaKnown RBP18.55■□□□□ 0.56
SSBP4-213ENST00000602088 ZNF598Q86UK7 904 aaKnown RBP18.55■□□□□ 0.56
SSBP4-213ENST00000602088 SPRYD3Q8NCJ5 442 aa18.55■□□□□ 0.56
SSBP4-213ENST00000602088 FBXO22Q8NEZ5 403 aa18.55■□□□□ 0.56
SSBP4-213ENST00000602088 GDPD5Q8WTR4 605 aa18.55■□□□□ 0.56
SSBP4-213ENST00000602088 NT5C3AQ9H0P0 336 aa18.55■□□□□ 0.56
SSBP4-213ENST00000602088 MTCH2Q9Y6C9 303 aa18.55■□□□□ 0.56
SSBP4-213ENST00000602088 FNDC1Q4ZHG4 1894 aaPredicted RBP18.54■□□□□ 0.56
SSBP4-213ENST00000602088 NLRC5Q86WI3 1866 aa18.54■□□□□ 0.56
SSBP4-213ENST00000602088 A0A0C4DFX4 3053 aa18.54■□□□□ 0.56
SSBP4-213ENST00000602088 INO80B-WBP1J3KQ70 363 aa18.54■□□□□ 0.56
SSBP4-213ENST00000602088 SLC26A4O43511 780 aa18.54■□□□□ 0.56
SSBP4-213ENST00000602088 FGFR1P11362 822 aa18.54■□□□□ 0.56
SSBP4-213ENST00000602088 BMPR1AP36894 532 aa18.54■□□□□ 0.56
SSBP4-213ENST00000602088 UBA7P41226 1012 aa18.54■□□□□ 0.56
SSBP4-213ENST00000602088 CEBPZQ03701 1054 aaKnown RBP18.54■□□□□ 0.56
SSBP4-213ENST00000602088 MBTD1Q05BQ5 628 aa18.54■□□□□ 0.56
SSBP4-213ENST00000602088 PAN2Q504Q3 1202 aaKnown RBP18.54■□□□□ 0.56
SSBP4-213ENST00000602088 TWF2Q6IBS0 349 aaKnown RBP18.54■□□□□ 0.56
SSBP4-213ENST00000602088 CABP7Q86V35 215 aa18.54■□□□□ 0.56
SSBP4-213ENST00000602088 CDK5RAP3Q96JB5 506 aa18.54■□□□□ 0.56
SSBP4-213ENST00000602088 USP28Q96RU2 1077 aa18.54■□□□□ 0.56
SSBP4-213ENST00000602088 RNF19AQ9NV58 838 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms