RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 PTGDRQ13258 359 aa19.16■□□□□ 0.66
HERC3-214ENST00000601319 MCTP1Q6DN14 999 aa19.16■□□□□ 0.66
HERC3-214ENST00000601319 PRPF31Q8WWY3 499 aaKnown RBP19.16■□□□□ 0.66
HERC3-214ENST00000601319 TMEM143Q96AN5 459 aa19.16■□□□□ 0.66
HERC3-214ENST00000601319 NLRP4Q96MN2 994 aa19.16■□□□□ 0.66
HERC3-214ENST00000601319 CCDC43Q96MW1 224 aaKnown RBP19.16■□□□□ 0.66
HERC3-214ENST00000601319 ATP6V0A4Q9HBG4 840 aa19.16■□□□□ 0.66
HERC3-214ENST00000601319 IFT122Q9HBG6 1241 aa19.16■□□□□ 0.66
HERC3-214ENST00000601319 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.16■□□□□ 0.66
HERC3-214ENST00000601319 DACT1Q9NYF0 836 aa19.16■□□□□ 0.66
HERC3-214ENST00000601319 DBR1Q9UK59 544 aaKnown RBP19.16■□□□□ 0.66
HERC3-214ENST00000601319 HOXA2O43364 376 aa19.15■□□□□ 0.66
HERC3-214ENST00000601319 MED24O75448 989 aa19.15■□□□□ 0.66
HERC3-214ENST00000601319 BMPR1AP36894 532 aa19.15■□□□□ 0.66
HERC3-214ENST00000601319 LAMTOR4Q0VGL1 99 aa19.15■□□□□ 0.66
HERC3-214ENST00000601319 PDIA5Q14554 519 aa19.15■□□□□ 0.66
HERC3-214ENST00000601319 MXD4Q14582 209 aaPredicted RBP19.15■□□□□ 0.66
HERC3-214ENST00000601319 SRGAP1Q7Z6B7 1085 aa19.15■□□□□ 0.66
HERC3-214ENST00000601319 FERMT3Q86UX7 667 aa19.15■□□□□ 0.66
HERC3-214ENST00000601319 KSR1Q8IVT5 923 aa19.15■□□□□ 0.66
HERC3-214ENST00000601319 IGSF22Q8N9C0 903 aa19.15■□□□□ 0.66
HERC3-214ENST00000601319 NACC1Q96RE7 527 aa19.15■□□□□ 0.66
HERC3-214ENST00000601319 C11orf84Q9BUA3 381 aaPredicted RBP19.15■□□□□ 0.66
HERC3-214ENST00000601319 PLVAPQ9BX97 442 aa19.15■□□□□ 0.66
HERC3-214ENST00000601319 RAB34Q9BZG1 259 aa19.15■□□□□ 0.66
HERC3-214ENST00000601319 STK24Q9Y6E0 443 aa19.15■□□□□ 0.66
HERC3-214ENST00000601319 MRPL42Q9Y6G3 142 aaKnown RBP19.15■□□□□ 0.66
HERC3-214ENST00000601319 VCANP13611 3396 aa19.15■□□□□ 0.66
HERC3-214ENST00000601319 BRWD1Q9NSI6 2320 aa19.14■□□□□ 0.66
HERC3-214ENST00000601319 A0A0U1RQF3 1178 aa19.14■□□□□ 0.65
HERC3-214ENST00000601319 POU5F1BQ06416 359 aa19.14■□□□□ 0.65
HERC3-214ENST00000601319 GPM6BQ13491 265 aa19.14■□□□□ 0.65
HERC3-214ENST00000601319 PCBP1Q15365 356 aaKnown RBP eCLIP19.14■□□□□ 0.65
HERC3-214ENST00000601319 CCDC85BQ15834 202 aaPredicted RBP19.14■□□□□ 0.65
HERC3-214ENST00000601319 LARP1BQ659C4 914 aaKnown RBP19.14■□□□□ 0.65
HERC3-214ENST00000601319 ECHDC2Q86YB7 292 aa19.14■□□□□ 0.65
HERC3-214ENST00000601319 MICALL1Q8N3F8 863 aa19.14■□□□□ 0.65
HERC3-214ENST00000601319 PIGOQ8TEQ8 1089 aa19.14■□□□□ 0.65
HERC3-214ENST00000601319 PPM1EQ8WY54 764 aa19.14■□□□□ 0.65
HERC3-214ENST00000601319 RSPH1Q8WYR4 309 aa19.14■□□□□ 0.65
HERC3-214ENST00000601319 P2RX5Q93086 422 aa19.14■□□□□ 0.65
HERC3-214ENST00000601319 MRPL38Q96DV4 380 aaKnown RBP19.14■□□□□ 0.65
HERC3-214ENST00000601319 BMP2KQ9NSY1 1161 aaPredicted RBP19.14■□□□□ 0.65
HERC3-214ENST00000601319 AGPAT5Q9NUQ2 364 aa19.14■□□□□ 0.65
HERC3-214ENST00000601319 THEGQ9P2T0 379 aa19.14■□□□□ 0.65
HERC3-214ENST00000601319 PDCP20941 246 aa19.13■□□□□ 0.65
HERC3-214ENST00000601319 FGFR4P22455 802 aa19.13■□□□□ 0.65
HERC3-214ENST00000601319 ATP2C1P98194 919 aaPredicted RBP19.13■□□□□ 0.65
HERC3-214ENST00000601319 PTPROQ16827 1216 aa19.13■□□□□ 0.65
HERC3-214ENST00000601319 NAALADL2Q58DX5 795 aa19.13■□□□□ 0.65
HERC3-214ENST00000601319 POTEGQ6S5H5 508 aa19.13■□□□□ 0.65
HERC3-214ENST00000601319 IFNLR1Q8IU57 520 aaPredicted RBP19.13■□□□□ 0.65
HERC3-214ENST00000601319 MCPH1Q8NEM0 835 aa19.13■□□□□ 0.65
HERC3-214ENST00000601319 INTS4Q96HW7 963 aaKnown RBP19.13■□□□□ 0.65
HERC3-214ENST00000601319 LMAN2LQ9H0V9 348 aa19.13■□□□□ 0.65
HERC3-214ENST00000601319 LRWD1Q9UFC0 647 aa19.13■□□□□ 0.65
HERC3-214ENST00000601319 CSDE1O75534 798 aaKnown RBP19.12■□□□□ 0.65
HERC3-214ENST00000601319 EOMESO95936 686 aa19.12■□□□□ 0.65
HERC3-214ENST00000601319 ARL2P36404 184 aa19.12■□□□□ 0.65
HERC3-214ENST00000601319 PHKA2P46019 1235 aa19.12■□□□□ 0.65
HERC3-214ENST00000601319 GATMP50440 423 aa19.12■□□□□ 0.65
HERC3-214ENST00000601319 TFDP1Q14186 410 aa19.12■□□□□ 0.65
HERC3-214ENST00000601319 PAN2Q504Q3 1202 aaKnown RBP19.12■□□□□ 0.65
HERC3-214ENST00000601319 TIGD5Q53EQ6 642 aa19.12■□□□□ 0.65
HERC3-214ENST00000601319 CATSPER4Q7RTX7 472 aa19.12■□□□□ 0.65
HERC3-214ENST00000601319 BRAPQ7Z569 592 aa19.12■□□□□ 0.65
HERC3-214ENST00000601319 ZNF598Q86UK7 904 aaKnown RBP19.12■□□□□ 0.65
HERC3-214ENST00000601319 RNF149Q8NC42 400 aa19.12■□□□□ 0.65
HERC3-214ENST00000601319 ATXN2LQ8WWM7 1075 aaKnown RBP19.12■□□□□ 0.65
HERC3-214ENST00000601319 NFKBIZQ9BYH8 718 aa19.12■□□□□ 0.65
HERC3-214ENST00000601319 TMEM117Q9H0C3 514 aa19.12■□□□□ 0.65
HERC3-214ENST00000601319 RNF19AQ9NV58 838 aa19.12■□□□□ 0.65
HERC3-214ENST00000601319 PIN4Q9Y237 131 aaKnown RBP19.12■□□□□ 0.65
HERC3-214ENST00000601319 MYH11P35749 1972 aa19.12■□□□□ 0.65
HERC3-214ENST00000601319 USO1O60763 962 aaKnown RBP19.11■□□□□ 0.65
HERC3-214ENST00000601319 SRGAP2CP0DJJ0 459 aa19.11■□□□□ 0.65
HERC3-214ENST00000601319 FGFR1P11362 822 aa19.11■□□□□ 0.65
HERC3-214ENST00000601319 SKIP12755 728 aa19.11■□□□□ 0.65
HERC3-214ENST00000601319 ATF7P17544 494 aaPredicted RBP19.11■□□□□ 0.65
HERC3-214ENST00000601319 CCT6AP40227 531 aaKnown RBP19.11■□□□□ 0.65
HERC3-214ENST00000601319 RAB27AP51159 221 aa19.11■□□□□ 0.65
HERC3-214ENST00000601319 PTENP60484 403 aa19.11■□□□□ 0.65
HERC3-214ENST00000601319 FAM102BQ5T8I3 360 aa19.11■□□□□ 0.65
HERC3-214ENST00000601319 DTHD1Q6ZMT9 781 aa19.11■□□□□ 0.65
HERC3-214ENST00000601319 PRDM6Q9NQX0 595 aa19.11■□□□□ 0.65
HERC3-214ENST00000601319 SPTBN5Q9NRC6 3674 aaKnown RBP19.1■□□□□ 0.65
HERC3-214ENST00000601319 TBKBP1A7MCY6 615 aa19.1■□□□□ 0.65
HERC3-214ENST00000601319 K7ELQ4 463 aaPredicted RBP19.1■□□□□ 0.65
HERC3-214ENST00000601319 CAPSQ13938 189 aa19.1■□□□□ 0.65
HERC3-214ENST00000601319 IL17AQ16552 155 aa19.1■□□□□ 0.65
HERC3-214ENST00000601319 ARL6IP4Q66PJ3 421 aaKnown RBP19.1■□□□□ 0.65
HERC3-214ENST00000601319 TWF2Q6IBS0 349 aaKnown RBP19.1■□□□□ 0.65
HERC3-214ENST00000601319 LRRC43Q8N309 656 aa19.1■□□□□ 0.65
HERC3-214ENST00000601319 MINDY3Q9H8M7 445 aa19.1■□□□□ 0.65
HERC3-214ENST00000601319 COG5Q9UP83 839 aa19.1■□□□□ 0.65
HERC3-214ENST00000601319 TDRD15B5MCY1 1934 aaKnown RBP19.1■□□□□ 0.65
HERC3-214ENST00000601319 ARHGEF35A5YM69 484 aa19.09■□□□□ 0.65
HERC3-214ENST00000601319 ZNF623O75123 536 aa19.09■□□□□ 0.65
HERC3-214ENST00000601319 IBSPP21815 317 aaPredicted RBP19.09■□□□□ 0.65
HERC3-214ENST00000601319 GLRA2P23416 452 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms