RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 ZNF558Q96NG5 402 aa19.08■□□□□ 0.64
SCAF1-204ENST00000601038 SH2D3AQ9BRG2 576 aa19.08■□□□□ 0.64
SCAF1-204ENST00000601038 INO80BQ9C086 356 aaPredicted RBP19.08■□□□□ 0.64
SCAF1-204ENST00000601038 KCNMB3Q9NPA1 279 aa19.08■□□□□ 0.64
SCAF1-204ENST00000601038 TPCN1Q9ULQ1 816 aa19.08■□□□□ 0.64
SCAF1-204ENST00000601038 A0A087WZ62 844 aa19.07■□□□□ 0.64
SCAF1-204ENST00000601038 EML1O00423 815 aa19.07■□□□□ 0.64
SCAF1-204ENST00000601038 GCFC2P16383 781 aaKnown RBP19.07■□□□□ 0.64
SCAF1-204ENST00000601038 TMEM184AQ6ZMB5 413 aa19.07■□□□□ 0.64
SCAF1-204ENST00000601038 NEK8Q86SG6 692 aa19.07■□□□□ 0.64
SCAF1-204ENST00000601038 ZNF410Q86VK4 478 aa19.07■□□□□ 0.64
SCAF1-204ENST00000601038 RNF135Q8IUD6 432 aa19.07■□□□□ 0.64
SCAF1-204ENST00000601038 JPH2Q9BR39 696 aaPredicted RBP19.07■□□□□ 0.64
SCAF1-204ENST00000601038 FDXACB1Q9BRP7 624 aaPredicted RBP19.07■□□□□ 0.64
SCAF1-204ENST00000601038 TRAIPQ9BWF2 469 aa19.07■□□□□ 0.64
SCAF1-204ENST00000601038 NGRNQ9NPE2 291 aaKnown RBP19.07■□□□□ 0.64
SCAF1-204ENST00000601038 SPG21Q9NZD8 308 aa19.07■□□□□ 0.64
SCAF1-204ENST00000601038 SUCLA2Q9P2R7 463 aaPredicted RBP19.07■□□□□ 0.64
SCAF1-204ENST00000601038 DKC1O60832 514 aaKnown RBP eCLIP19.06■□□□□ 0.64
SCAF1-204ENST00000601038 ATF7P17544 494 aaPredicted RBP19.06■□□□□ 0.64
SCAF1-204ENST00000601038 SFPQP23246 707 aaKnown RBP eCLIP19.06■□□□□ 0.64
SCAF1-204ENST00000601038 QARSP47897 775 aaKnown RBP19.06■□□□□ 0.64
SCAF1-204ENST00000601038 KCNC3Q14003 757 aa19.06■□□□□ 0.64
SCAF1-204ENST00000601038 HERC4Q5GLZ8 1057 aaPredicted RBP19.06■□□□□ 0.64
SCAF1-204ENST00000601038 RHPN2Q8IUC4 686 aa19.06■□□□□ 0.64
SCAF1-204ENST00000601038 VN1R2Q8NFZ6 395 aa19.06■□□□□ 0.64
SCAF1-204ENST00000601038 NAP1L4Q99733 375 aaKnown RBP19.06■□□□□ 0.64
SCAF1-204ENST00000601038 TCF25Q9BQ70 676 aa19.06■□□□□ 0.64
SCAF1-204ENST00000601038 CYP26B1Q9NR63 512 aa19.06■□□□□ 0.64
SCAF1-204ENST00000601038 VAV3Q9UKW4 847 aa19.06■□□□□ 0.64
SCAF1-204ENST00000601038 USP15Q9Y4E8 981 aaPredicted RBP19.06■□□□□ 0.64
SCAF1-204ENST00000601038 TBX3O15119 743 aa19.05■□□□□ 0.64
SCAF1-204ENST00000601038 NEFLP07196 543 aa19.05■□□□□ 0.64
SCAF1-204ENST00000601038 P4HBP07237 508 aaKnown RBP19.05■□□□□ 0.64
SCAF1-204ENST00000601038 SRGAP2BP0DMP2 458 aa19.05■□□□□ 0.64
SCAF1-204ENST00000601038 PBX3P40426 434 aa19.05■□□□□ 0.64
SCAF1-204ENST00000601038 ANAPC15P60006 121 aa19.05■□□□□ 0.64
SCAF1-204ENST00000601038 RBM10P98175 930 aaKnown RBP19.05■□□□□ 0.64
SCAF1-204ENST00000601038 ANKRD1Q15327 319 aa19.05■□□□□ 0.64
SCAF1-204ENST00000601038 PLPP4Q5VZY2 271 aa19.05■□□□□ 0.64
SCAF1-204ENST00000601038 PIK3AP1Q6ZUJ8 805 aa19.05■□□□□ 0.64
SCAF1-204ENST00000601038 HELQQ8TDG4 1101 aa19.05■□□□□ 0.64
SCAF1-204ENST00000601038 RSPH1Q8WYR4 309 aa19.05■□□□□ 0.64
SCAF1-204ENST00000601038 MRPL9Q9BYD2 267 aaKnown RBP19.05■□□□□ 0.64
SCAF1-204ENST00000601038 ENTPD7Q9NQZ7 604 aa19.05■□□□□ 0.64
SCAF1-204ENST00000601038 MUTYHQ9UIF7 546 aa19.05■□□□□ 0.64
SCAF1-204ENST00000601038 LOC730098B7Z3J9 87 aa19.04■□□□□ 0.64
SCAF1-204ENST00000601038 CCNT1O60563 726 aaKnown RBP19.04■□□□□ 0.64
SCAF1-204ENST00000601038 CTDNEP1O95476 244 aa19.04■□□□□ 0.64
SCAF1-204ENST00000601038 SKIP12755 728 aa19.04■□□□□ 0.64
SCAF1-204ENST00000601038 PHKA2P46019 1235 aa19.04■□□□□ 0.64
SCAF1-204ENST00000601038 ALDH7A1P49419 539 aaKnown RBP19.04■□□□□ 0.64
SCAF1-204ENST00000601038 PLA2G4FQ68DD2 849 aa19.04■□□□□ 0.64
SCAF1-204ENST00000601038 TWF2Q6IBS0 349 aaKnown RBP19.04■□□□□ 0.64
SCAF1-204ENST00000601038 EXOC8Q8IYI6 725 aa19.04■□□□□ 0.64
SCAF1-204ENST00000601038 SLC39A11Q8N1S5 342 aa19.04■□□□□ 0.64
SCAF1-204ENST00000601038 OXER1Q8TDS5 423 aa19.04■□□□□ 0.64
SCAF1-204ENST00000601038 SUSD6Q92537 303 aa19.04■□□□□ 0.64
SCAF1-204ENST00000601038 WASF1Q92558 559 aa19.04■□□□□ 0.64
SCAF1-204ENST00000601038 HAS1Q92839 578 aa19.04■□□□□ 0.64
SCAF1-204ENST00000601038 PHF7Q9BWX1 381 aaPredicted RBP19.04■□□□□ 0.64
SCAF1-204ENST00000601038 GJB4Q9NTQ9 266 aa19.04■□□□□ 0.64
SCAF1-204ENST00000601038 ORC3Q9UBD5 711 aaPredicted RBP19.04■□□□□ 0.64
SCAF1-204ENST00000601038 PPME1Q9Y570 386 aa19.04■□□□□ 0.64
SCAF1-204ENST00000601038 HIDE1A8MVS5 230 aa19.03■□□□□ 0.64
SCAF1-204ENST00000601038 NPEPPSP55786 919 aa19.03■□□□□ 0.64
SCAF1-204ENST00000601038 CBX2Q14781 532 aaPredicted RBP19.03■□□□□ 0.64
SCAF1-204ENST00000601038 EPHA7Q15375 998 aa19.03■□□□□ 0.64
SCAF1-204ENST00000601038 TMC7Q7Z402 723 aa19.03■□□□□ 0.64
SCAF1-204ENST00000601038 KSR1Q8IVT5 923 aa19.03■□□□□ 0.64
SCAF1-204ENST00000601038 C4orf19Q8IY42 314 aa19.03■□□□□ 0.64
SCAF1-204ENST00000601038 SLC7A3Q8WY07 619 aa19.03■□□□□ 0.64
SCAF1-204ENST00000601038 CEP170P1Q96L14 293 aa19.03■□□□□ 0.64
SCAF1-204ENST00000601038 NLRP4Q96MN2 994 aa19.03■□□□□ 0.64
SCAF1-204ENST00000601038 DHX33Q9H6R0 707 aaKnown RBP19.03■□□□□ 0.64
SCAF1-204ENST00000601038 IFT122Q9HBG6 1241 aa19.03■□□□□ 0.64
SCAF1-204ENST00000601038 PIN4Q9Y237 131 aaKnown RBP19.03■□□□□ 0.64
SCAF1-204ENST00000601038 MARCH6O60337 910 aa19.02■□□□□ 0.64
SCAF1-204ENST00000601038 ZNF623O75123 536 aa19.02■□□□□ 0.64
SCAF1-204ENST00000601038 RAB27AP51159 221 aa19.02■□□□□ 0.64
SCAF1-204ENST00000601038 AK2P54819 239 aa19.02■□□□□ 0.64
SCAF1-204ENST00000601038 BCAR1P56945 870 aa19.02■□□□□ 0.64
SCAF1-204ENST00000601038 ANKRD54Q6NXT1 300 aa19.02■□□□□ 0.64
SCAF1-204ENST00000601038 CATSPER4Q7RTX7 472 aa19.02■□□□□ 0.64
SCAF1-204ENST00000601038 MRPL43Q8N983 215 aaKnown RBP19.02■□□□□ 0.64
SCAF1-204ENST00000601038 ZNF579Q8NAF0 562 aaKnown RBP19.02■□□□□ 0.64
SCAF1-204ENST00000601038 EDAQ92838 391 aa19.02■□□□□ 0.64
SCAF1-204ENST00000601038 S1PR5Q9H228 398 aa19.02■□□□□ 0.64
SCAF1-204ENST00000601038 FAM105AQ9NUU6 356 aa19.02■□□□□ 0.64
SCAF1-204ENST00000601038 WRAP73Q9P2S5 460 aaPredicted RBP19.02■□□□□ 0.64
SCAF1-204ENST00000601038 COL4A3BPQ9Y5P4 624 aa19.02■□□□□ 0.64
SCAF1-204ENST00000601038 CARNS1A5YM72 827 aa19.01■□□□□ 0.63
SCAF1-204ENST00000601038 DTNBO60941 627 aa19.01■□□□□ 0.63
SCAF1-204ENST00000601038 BAG4O95429 457 aaKnown RBP19.01■□□□□ 0.63
SCAF1-204ENST00000601038 FDPSP14324 419 aaKnown RBP19.01■□□□□ 0.63
SCAF1-204ENST00000601038 HOXB8P17481 243 aaPredicted RBP19.01■□□□□ 0.63
SCAF1-204ENST00000601038 RFC5P40937 340 aa19.01■□□□□ 0.63
SCAF1-204ENST00000601038 TECP42680 631 aa19.01■□□□□ 0.63
SCAF1-204ENST00000601038 POLGP54098 1239 aaPredicted RBP19.01■□□□□ 0.63
SCAF1-204ENST00000601038 SMC1AQ14683 1233 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms