RNA–Protein interactions for RNA: ENST00000601009.1

FARP1-232, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-232ENST00000601009 CYP26B1Q9NR63 512 aa10.29□□□□□ -0.76
FARP1-232ENST00000601009 SUCLA2Q9P2R7 463 aaPredicted RBP10.29□□□□□ -0.76
FARP1-232ENST00000601009 PLXNA4Q9HCM2 1894 aa10.29□□□□□ -0.76
FARP1-232ENST00000601009 DCXO43602 365 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 TBX10O75333 385 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 EYA4O95677 639 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 DNAJB1P25685 340 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 ALDH7A1P49419 539 aaKnown RBP10.28□□□□□ -0.76
FARP1-232ENST00000601009 AK2P54819 239 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 COASYQ13057 564 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 EPHA7Q15375 998 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 CLUL1Q15846 466 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 KCNT2Q6UVM3 1135 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 CATSPER4Q7RTX7 472 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 TCP11Q8WWU5 503 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 PSPC1Q8WXF1 523 aaKnown RBP10.28□□□□□ -0.76
FARP1-232ENST00000601009 MRPS27Q92552 414 aaKnown RBP10.28□□□□□ -0.76
FARP1-232ENST00000601009 GTF3C6Q969F1 213 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 PGBD4Q96DM1 585 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 CEP170P1Q96L14 293 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 CCDC43Q96MW1 224 aaKnown RBP10.28□□□□□ -0.76
FARP1-232ENST00000601009 CASD1Q96PB1 797 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 LRFN3Q9BTN0 628 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 TRAIPQ9BWF2 469 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 CWH43Q9H720 699 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 ZSWIM4Q9H7M6 989 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 SPG21Q9NZD8 308 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 VAV3Q9UKW4 847 aa10.28□□□□□ -0.76
FARP1-232ENST00000601009 PIN4Q9Y237 131 aaKnown RBP10.28□□□□□ -0.76
FARP1-232ENST00000601009 ARIH1Q9Y4X5 557 aaPredicted RBP10.28□□□□□ -0.76
FARP1-232ENST00000601009 A0A087WZ62 844 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 C19orf67A6NJJ6 358 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 PRR33A8MZF0 331 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 ASAP2O43150 1006 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 GTF2F1P35269 517 aaKnown RBP eCLIP10.27□□□□□ -0.77
FARP1-232ENST00000601009 IRS1P35568 1242 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 PHKA2P46019 1235 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 DLX2Q07687 328 aaPredicted RBP10.27□□□□□ -0.77
FARP1-232ENST00000601009 NCBP1Q09161 790 aaKnown RBP10.27□□□□□ -0.77
FARP1-232ENST00000601009 PCBP1Q15365 356 aaKnown RBP eCLIP10.27□□□□□ -0.77
FARP1-232ENST00000601009 SAFBQ15424 915 aaKnown RBP eCLIP10.27□□□□□ -0.77
FARP1-232ENST00000601009 NCAPH2Q6IBW4 605 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 GLB1LQ6UWU2 654 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 ANO5Q75V66 913 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 ADGRD2Q7Z7M1 963 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 RBM23Q86U06 439 aaKnown RBP10.27□□□□□ -0.77
FARP1-232ENST00000601009 C4orf19Q8IY42 314 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 TMEM87AQ8NBN3 555 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 SMRP1Q8NCR6 262 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 FAM122AQ96E09 287 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 ZNF668Q96K58 619 aaPredicted RBP10.27□□□□□ -0.77
FARP1-232ENST00000601009 MSLNLQ96KJ4 702 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 NLRP4Q96MN2 994 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 TCF25Q9BQ70 676 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 FDXACB1Q9BRP7 624 aaPredicted RBP10.27□□□□□ -0.77
FARP1-232ENST00000601009 LXNQ9BS40 222 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 CD320Q9NPF0 282 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 STK39Q9UEW8 545 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 COL4A3BPQ9Y5P4 624 aa10.27□□□□□ -0.77
FARP1-232ENST00000601009 TMEM150BA6NC51 233 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 EML1O00423 815 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 FSCN2O14926 492 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 LINC01565O15544 149 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 STBD1O95210 358 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 FGFR4P22455 802 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 YWHABP31946 246 aaKnown RBP10.26□□□□□ -0.77
FARP1-232ENST00000601009 NEK4P51957 841 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 RNASELQ05823 741 aaKnown RBP10.26□□□□□ -0.77
FARP1-232ENST00000601009 DRP2Q13474 957 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 SMC1AQ14683 1233 aaKnown RBP10.26□□□□□ -0.77
FARP1-232ENST00000601009 CALCRLQ16602 461 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 DUSP6Q16828 381 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 CLLU1OSQ5K130 101 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 PLPP4Q5VZY2 271 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 PLA2G4FQ68DD2 849 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 TMC7Q7Z402 723 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 SRGAP1Q7Z6B7 1085 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 ZNF598Q86UK7 904 aaKnown RBP10.26□□□□□ -0.77
FARP1-232ENST00000601009 URGCPQ8TCY9 931 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 HELQQ8TDG4 1101 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 TMEM169Q96HH4 297 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 CEP89Q96ST8 783 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 SH2D3AQ9BRG2 576 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 DHX33Q9H6R0 707 aaKnown RBP10.26□□□□□ -0.77
FARP1-232ENST00000601009 FAM105AQ9NUU6 356 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 PCDHA12Q9UN75 941 aa10.26□□□□□ -0.77
FARP1-232ENST00000601009 TRIOO75962 3097 aa10.25□□□□□ -0.77
FARP1-232ENST00000601009 NEMFO60524 1076 aa10.25□□□□□ -0.77
FARP1-232ENST00000601009 ZNF623O75123 536 aa10.25□□□□□ -0.77
FARP1-232ENST00000601009 ZC3H11AO75152 810 aaKnown RBP eCLIP10.25□□□□□ -0.77
FARP1-232ENST00000601009 ERLIN2O94905 339 aa10.25□□□□□ -0.77
FARP1-232ENST00000601009 CTDNEP1O95476 244 aa10.25□□□□□ -0.77
FARP1-232ENST00000601009 HOXB8P17481 243 aaPredicted RBP10.25□□□□□ -0.77
FARP1-232ENST00000601009 PLA2G5P39877 138 aa10.25□□□□□ -0.77
FARP1-232ENST00000601009 NPEPPSP55786 919 aa10.25□□□□□ -0.77
FARP1-232ENST00000601009 ERVFC1P60507 584 aa10.25□□□□□ -0.77
FARP1-232ENST00000601009 NR5A1Q13285 461 aa10.25□□□□□ -0.77
FARP1-232ENST00000601009 GIT2Q14161 759 aa10.25□□□□□ -0.77
FARP1-232ENST00000601009 TFDP1Q14186 410 aa10.25□□□□□ -0.77
FARP1-232ENST00000601009 MXD4Q14582 209 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms