RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 SLC22A17Q8WUG5 538 aa18.95■□□□□ 0.62
USE1-208ENST00000600970 SCLT1Q96NL6 688 aa18.95■□□□□ 0.62
USE1-208ENST00000600970 ANO2Q9NQ90 1003 aa18.95■□□□□ 0.62
USE1-208ENST00000600970 NRBP2Q9NSY0 501 aa18.95■□□□□ 0.62
USE1-208ENST00000600970 IRAK3Q9Y616 596 aa18.95■□□□□ 0.62
USE1-208ENST00000600970 ZFHX2Q9C0A1 2572 aaPredicted RBP18.94■□□□□ 0.62
USE1-208ENST00000600970 WDR64B1ANS9 1081 aa18.94■□□□□ 0.62
USE1-208ENST00000600970 ZC3H11AO75152 810 aaKnown RBP eCLIP18.94■□□□□ 0.62
USE1-208ENST00000600970 CSDE1O75534 798 aaKnown RBP18.94■□□□□ 0.62
USE1-208ENST00000600970 CWF19L1Q69YN2 538 aaKnown RBP18.94■□□□□ 0.62
USE1-208ENST00000600970 DDX53Q86TM3 631 aaKnown RBP18.94■□□□□ 0.62
USE1-208ENST00000600970 TMEM87AQ8NBN3 555 aa18.94■□□□□ 0.62
USE1-208ENST00000600970 NLRP7Q8WX94 980 aa18.94■□□□□ 0.62
USE1-208ENST00000600970 NKD2Q969F2 451 aaPredicted RBP18.94■□□□□ 0.62
USE1-208ENST00000600970 ZMYND12Q9H0C1 365 aa18.94■□□□□ 0.62
USE1-208ENST00000600970 CYP26B1Q9NR63 512 aa18.94■□□□□ 0.62
USE1-208ENST00000600970 CACNA1HO95180 2353 aa18.94■□□□□ 0.62
USE1-208ENST00000600970 VPS13AQ96RL7 3174 aa18.93■□□□□ 0.62
USE1-208ENST00000600970 KLF18A0A0U1RQI7 1052 aa18.93■□□□□ 0.62
USE1-208ENST00000600970 ESYT2A0FGR8 921 aa18.93■□□□□ 0.62
USE1-208ENST00000600970 CIITAP33076 1130 aa18.93■□□□□ 0.62
USE1-208ENST00000600970 POLGP54098 1239 aaPredicted RBP18.93■□□□□ 0.62
USE1-208ENST00000600970 PRKCEQ02156 737 aa18.93■□□□□ 0.62
USE1-208ENST00000600970 GIT2Q14161 759 aa18.93■□□□□ 0.62
USE1-208ENST00000600970 UGCGQ16739 394 aa18.93■□□□□ 0.62
USE1-208ENST00000600970 TMC5Q6UXY8 1006 aa18.93■□□□□ 0.62
USE1-208ENST00000600970 DHX32Q7L7V1 743 aaKnown RBP18.93■□□□□ 0.62
USE1-208ENST00000600970 FLCNQ8NFG4 579 aa18.93■□□□□ 0.62
USE1-208ENST00000600970 LENG9Q96B70 501 aa18.93■□□□□ 0.62
USE1-208ENST00000600970 IGSF21Q96ID5 467 aa18.93■□□□□ 0.62
USE1-208ENST00000600970 NRDE2Q9H7Z3 1164 aa18.93■□□□□ 0.62
USE1-208ENST00000600970 DISC1Q9NRI5 854 aa18.93■□□□□ 0.62
USE1-208ENST00000600970 C2orf16Q68DN1 1984 aa18.93■□□□□ 0.62
USE1-208ENST00000600970 DCHS1Q96JQ0 3298 aa18.92■□□□□ 0.62
USE1-208ENST00000600970 ADD1P35611 737 aaKnown RBP18.92■□□□□ 0.62
USE1-208ENST00000600970 PHKA2P46019 1235 aa18.92■□□□□ 0.62
USE1-208ENST00000600970 DRP2Q13474 957 aa18.92■□□□□ 0.62
USE1-208ENST00000600970 RNF20Q5VTR2 975 aa18.92■□□□□ 0.62
USE1-208ENST00000600970 CABP7Q86V35 215 aa18.92■□□□□ 0.62
USE1-208ENST00000600970 REXO1Q8N1G1 1221 aaKnown RBP18.92■□□□□ 0.62
USE1-208ENST00000600970 BCL7CQ8WUZ0 217 aaPredicted RBP18.92■□□□□ 0.62
USE1-208ENST00000600970 LPPQ93052 612 aa18.92■□□□□ 0.62
USE1-208ENST00000600970 C6orf50Q9HD87 102 aa18.92■□□□□ 0.62
USE1-208ENST00000600970 CHST12Q9NRB3 414 aa18.92■□□□□ 0.62
USE1-208ENST00000600970 PI15O43692 258 aa18.91■□□□□ 0.62
USE1-208ENST00000600970 GALTP07902 379 aa18.91■□□□□ 0.62
USE1-208ENST00000600970 NPR3P17342 541 aa18.91■□□□□ 0.62
USE1-208ENST00000600970 TBC1D8BQ0IIM8 1120 aa18.91■□□□□ 0.62
USE1-208ENST00000600970 TARBP2Q15633 366 aaKnown RBP18.91■□□□□ 0.62
USE1-208ENST00000600970 LONRF3Q496Y0 759 aa18.91■□□□□ 0.62
USE1-208ENST00000600970 GPR149Q86SP6 731 aa18.91■□□□□ 0.62
USE1-208ENST00000600970 ADSSL1Q8N142 457 aa18.91■□□□□ 0.62
USE1-208ENST00000600970 RSPH1Q8WYR4 309 aa18.91■□□□□ 0.62
USE1-208ENST00000600970 ACSF2Q96CM8 615 aaPredicted RBP18.91■□□□□ 0.62
USE1-208ENST00000600970 TRAIPQ9BWF2 469 aa18.91■□□□□ 0.62
USE1-208ENST00000600970 GCOM2Q9BZD3 368 aaPredicted RBP18.91■□□□□ 0.62
USE1-208ENST00000600970 TBC1D13Q9NVG8 400 aa18.91■□□□□ 0.62
USE1-208ENST00000600970 CARNS1A5YM72 827 aa18.9■□□□□ 0.62
USE1-208ENST00000600970 EDIL3O43854 480 aa18.9■□□□□ 0.62
USE1-208ENST00000600970 AOC1P19801 751 aa18.9■□□□□ 0.62
USE1-208ENST00000600970 RCAN1P53805 252 aa18.9■□□□□ 0.62
USE1-208ENST00000600970 TDGQ13569 410 aa18.9■□□□□ 0.62
USE1-208ENST00000600970 ADCK5Q3MIX3 580 aa18.9■□□□□ 0.62
USE1-208ENST00000600970 NOMO2Q5JPE7 1267 aa18.9■□□□□ 0.62
USE1-208ENST00000600970 TWF2Q6IBS0 349 aaKnown RBP18.9■□□□□ 0.62
USE1-208ENST00000600970 PPFIBP1Q86W92 1011 aa18.9■□□□□ 0.62
USE1-208ENST00000600970 CCDC12Q8WUD4 166 aaPredicted RBP18.9■□□□□ 0.62
USE1-208ENST00000600970 VN1R3Q9BXE9 311 aa18.9■□□□□ 0.62
USE1-208ENST00000600970 SFXN1Q9H9B4 322 aa18.9■□□□□ 0.62
USE1-208ENST00000600970 DNAJB4Q9UDY4 337 aa18.9■□□□□ 0.62
USE1-208ENST00000600970 A0A087WZ62 844 aa18.89■□□□□ 0.61
USE1-208ENST00000600970 MEIS3P2A8K0S8 358 aa18.89■□□□□ 0.61
USE1-208ENST00000600970 MSH4O15457 936 aa18.89■□□□□ 0.61
USE1-208ENST00000600970 CHMP2AO43633 222 aa18.89■□□□□ 0.61
USE1-208ENST00000600970 GNA11P29992 359 aa18.89■□□□□ 0.61
USE1-208ENST00000600970 ID4P47928 161 aa18.89■□□□□ 0.61
USE1-208ENST00000600970 PTPN14Q15678 1187 aa18.89■□□□□ 0.61
USE1-208ENST00000600970 GLB1LQ6UWU2 654 aa18.89■□□□□ 0.61
USE1-208ENST00000600970 CCDC149Q6ZUS6 474 aa18.89■□□□□ 0.61
USE1-208ENST00000600970 OTOP3Q7RTS5 596 aa18.89■□□□□ 0.61
USE1-208ENST00000600970 ERMP1Q7Z2K6 904 aa18.89■□□□□ 0.61
USE1-208ENST00000600970 CCDC105Q8IYK2 499 aa18.89■□□□□ 0.61
USE1-208ENST00000600970 RASEFQ8IZ41 740 aa18.89■□□□□ 0.61
USE1-208ENST00000600970 YTHDC1Q96MU7 727 aaKnown RBP18.89■□□□□ 0.61
USE1-208ENST00000600970 CEP89Q96ST8 783 aa18.89■□□□□ 0.61
USE1-208ENST00000600970 FDXACB1Q9BRP7 624 aaPredicted RBP18.89■□□□□ 0.61
USE1-208ENST00000600970 UNC45AQ9H3U1 944 aa18.89■□□□□ 0.61
USE1-208ENST00000600970 FAM105AQ9NUU6 356 aa18.89■□□□□ 0.61
USE1-208ENST00000600970 NAP1L2Q9ULW6 460 aaPredicted RBP18.89■□□□□ 0.61
USE1-208ENST00000600970 DUSP12Q9UNI6 340 aa18.89■□□□□ 0.61
USE1-208ENST00000600970 INPP5FQ9Y2H2 1132 aa18.89■□□□□ 0.61
USE1-208ENST00000600970 GAS7O60861 476 aa18.88■□□□□ 0.61
USE1-208ENST00000600970 OFD1O75665 1012 aa18.88■□□□□ 0.61
USE1-208ENST00000600970 SKIP12755 728 aa18.88■□□□□ 0.61
USE1-208ENST00000600970 SFPQP23246 707 aaKnown RBP eCLIP18.88■□□□□ 0.61
USE1-208ENST00000600970 SFNP31947 248 aa18.88■□□□□ 0.61
USE1-208ENST00000600970 SLC11A1P49279 550 aa18.88■□□□□ 0.61
USE1-208ENST00000600970 CLCN4P51793 760 aa18.88■□□□□ 0.61
USE1-208ENST00000600970 JAK3P52333 1124 aa18.88■□□□□ 0.61
USE1-208ENST00000600970 CDC42EP1Q00587 391 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms