RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 ABI1Q8IZP0 508 aa16.85■□□□□ 0.29
SHKBP1-226ENST00000600791 EFHBQ8N7U6 833 aa16.85■□□□□ 0.29
SHKBP1-226ENST00000600791 BRMS1Q9HCU9 246 aa16.85■□□□□ 0.29
SHKBP1-226ENST00000600791 DACT1Q9NYF0 836 aa16.85■□□□□ 0.29
SHKBP1-226ENST00000600791 PRKAG3Q9UGI9 489 aa16.85■□□□□ 0.29
SHKBP1-226ENST00000600791 ARID2Q68CP9 1835 aa16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 PI4K2BG5E9Z4 385 aa16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 MARCH6O60337 910 aa16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 JAK2O60674 1132 aa16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 DKC1O60832 514 aaKnown RBP eCLIP16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 SEC24BO95487 1268 aa16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 SFPQP23246 707 aaKnown RBP eCLIP16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 PBX3P40426 434 aa16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 NEK4P51957 841 aa16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 SPIRE1Q08AE8 756 aa16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 SMAD4Q13485 552 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 SMAD2Q15796 467 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 NCAPH2Q6IBW4 605 aa16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 RBM23Q86U06 439 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 KSR1Q8IVT5 923 aa16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 ADHFE1Q8IWW8 467 aa16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 ZNF579Q8NAF0 562 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 MSLNLQ96KJ4 702 aa16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 NLRP4Q96MN2 994 aa16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 JPH2Q9BR39 696 aaPredicted RBP16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 LXNQ9BS40 222 aa16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 C11orf16Q9NQ32 467 aa16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 CLEC1BQ9P126 229 aa16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 CD207Q9UJ71 328 aa16.84■□□□□ 0.29
SHKBP1-226ENST00000600791 GLP2RO95838 553 aa16.83■□□□□ 0.28
SHKBP1-226ENST00000600791 EOMESO95936 686 aa16.83■□□□□ 0.28
SHKBP1-226ENST00000600791 ERVFC1P60507 584 aa16.83■□□□□ 0.28
SHKBP1-226ENST00000600791 ST3GAL1Q11201 340 aa16.83■□□□□ 0.28
SHKBP1-226ENST00000600791 EPHA7Q15375 998 aa16.83■□□□□ 0.28
SHKBP1-226ENST00000600791 TMEM31Q5JXX7 168 aa16.83■□□□□ 0.28
SHKBP1-226ENST00000600791 KCNT2Q6UVM3 1135 aa16.83■□□□□ 0.28
SHKBP1-226ENST00000600791 C4orf19Q8IY42 314 aa16.83■□□□□ 0.28
SHKBP1-226ENST00000600791 SLFN12Q8IYM2 578 aa16.83■□□□□ 0.28
SHKBP1-226ENST00000600791 HELQQ8TDG4 1101 aa16.83■□□□□ 0.28
SHKBP1-226ENST00000600791 MICAL1Q8TDZ2 1067 aa16.83■□□□□ 0.28
SHKBP1-226ENST00000600791 SLC7A3Q8WY07 619 aa16.83■□□□□ 0.28
SHKBP1-226ENST00000600791 CEP170P1Q96L14 293 aa16.83■□□□□ 0.28
SHKBP1-226ENST00000600791 ZNF558Q96NG5 402 aa16.83■□□□□ 0.28
SHKBP1-226ENST00000600791 LRFN3Q9BTN0 628 aa16.83■□□□□ 0.28
SHKBP1-226ENST00000600791 CHST12Q9NRB3 414 aa16.83■□□□□ 0.28
SHKBP1-226ENST00000600791 RGL1Q9NZL6 768 aa16.83■□□□□ 0.28
SHKBP1-226ENST00000600791 LZTS1Q9Y250 596 aa16.83■□□□□ 0.28
SHKBP1-226ENST00000600791 FAM86C2PA6NEL3 165 aa16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 C19orf67A6NJJ6 358 aa16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 FSCN2O14926 492 aa16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 EIF5BO60841 1220 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 YWHABP31946 246 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 RFC5P40937 340 aa16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 PHKA2P46019 1235 aa16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 FOSBP53539 338 aa16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 POLGP54098 1239 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 PLCB3Q01970 1234 aa16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 CYP4A11Q02928 519 aa16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 DIS3L2Q8IYB7 885 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 MRPS27Q92552 414 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 DYDC2Q96IM9 177 aa16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 TRAIPQ9BWF2 469 aa16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 INO80BQ9C086 356 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 DHX33Q9H6R0 707 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 TLE6Q9H808 572 aa16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 IFT122Q9HBG6 1241 aa16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 BMP2KQ9NSY1 1161 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 BARX2Q9UMQ3 279 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 PIN4Q9Y237 131 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 PPME1Q9Y570 386 aa16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 COL4A3BPQ9Y5P4 624 aa16.82■□□□□ 0.28
SHKBP1-226ENST00000600791 BTBD18B2RXH4 712 aa16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 WNT7AO00755 349 aa16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 PER2O15055 1255 aa16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 GPR37L1O60883 481 aa16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 BAG4O95429 457 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 EYA4O95677 639 aa16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 PPM1AP35813 382 aa16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 RBM10P98175 930 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 COASYQ13057 564 aa16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 CTTNQ14247 550 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 PLPP4Q5VZY2 271 aa16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 TWF2Q6IBS0 349 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 PDE12Q6L8Q7 609 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 CATSPER4Q7RTX7 472 aa16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 SMRP1Q8NCR6 262 aa16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 VN1R2Q8NFZ6 395 aa16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 PSPC1Q8WXF1 523 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 TMEM143Q96AN5 459 aa16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 TCF25Q9BQ70 676 aa16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 MRPL9Q9BYD2 267 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 ZSWIM4Q9H7M6 989 aa16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 TRIOO75962 3097 aa16.81■□□□□ 0.28
SHKBP1-226ENST00000600791 ZBTB39O15060 712 aa16.8■□□□□ 0.28
SHKBP1-226ENST00000600791 TRIM29Q14134 588 aa16.8■□□□□ 0.28
SHKBP1-226ENST00000600791 EMC2Q15006 297 aa16.8■□□□□ 0.28
SHKBP1-226ENST00000600791 CALCRLQ16602 461 aa16.8■□□□□ 0.28
SHKBP1-226ENST00000600791 DUSP6Q16828 381 aa16.8■□□□□ 0.28
SHKBP1-226ENST00000600791 EXOC8Q8IYI6 725 aa16.8■□□□□ 0.28
SHKBP1-226ENST00000600791 SLC39A11Q8N1S5 342 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms