RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 TDHQ8IZJ6 230 aa15.25■□□□□ 0.03
VRK3-219ENST00000600137 PDILTQ8N807 584 aa15.25■□□□□ 0.03
VRK3-219ENST00000600137 LARP4BQ92615 738 aaKnown RBP15.25■□□□□ 0.03
VRK3-219ENST00000600137 IFIH1Q9BYX4 1025 aaKnown RBP15.25■□□□□ 0.03
VRK3-219ENST00000600137 STK17AQ9UEE5 414 aa15.25■□□□□ 0.03
VRK3-219ENST00000600137 CCDC39Q9UFE4 941 aa15.25■□□□□ 0.03
VRK3-219ENST00000600137 ST3GAL5Q9UNP4 418 aa15.25■□□□□ 0.03
VRK3-219ENST00000600137 A0A1W2PPC1 479 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 A0A1W2PQ27 194 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 A0A1W2PQ64 194 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 A0A1W2PQD8 194 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 M0QZ92 97 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 ENPP3O14638 875 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 HIP1RO75146 1068 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 RPS6KA5O75582 802 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 SRGAP2CP0DJJ0 459 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 FGFR4P22455 802 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 GIT2Q14161 759 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 FAM102BQ5T8I3 360 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.24■□□□□ 0.03
VRK3-219ENST00000600137 CCDC73Q6ZRK6 1079 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 CRIPAKQ8N1N5 446 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 RNF149Q8NC42 400 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 SEPT8Q92599 483 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 DNAJC19Q96DA6 116 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 NLRP4Q96MN2 994 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 CCDC43Q96MW1 224 aaKnown RBP15.24■□□□□ 0.03
VRK3-219ENST00000600137 NFKBIZQ9BYH8 718 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 CHD9Q3L8U1 2897 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 TTC3P53804 2025 aa15.24■□□□□ 0.03
VRK3-219ENST00000600137 ADGRA3Q8IWK6 1321 aa15.23■□□□□ 0.03
VRK3-219ENST00000600137 A0A1B0GVL5 298 aa15.23■□□□□ 0.03
VRK3-219ENST00000600137 ABHD14A-ACY1A0A1B0GW23 586 aa15.23■□□□□ 0.03
VRK3-219ENST00000600137 MYMKA6NI61 221 aa15.23■□□□□ 0.03
VRK3-219ENST00000600137 SFI1A8K8P3 1242 aa15.23■□□□□ 0.03
VRK3-219ENST00000600137 POLR2DO15514 142 aaKnown RBP15.23■□□□□ 0.03
VRK3-219ENST00000600137 BAIAP3O94812 1187 aa15.23■□□□□ 0.03
VRK3-219ENST00000600137 SSBP05455 408 aaKnown RBP eCLIP15.23■□□□□ 0.03
VRK3-219ENST00000600137 TXLNAP40222 546 aa15.23■□□□□ 0.03
VRK3-219ENST00000600137 WDR5P61964 334 aaKnown RBP15.23■□□□□ 0.03
VRK3-219ENST00000600137 RAD51AP2Q09MP3 1159 aa15.23■□□□□ 0.03
VRK3-219ENST00000600137 DHX8Q14562 1220 aaKnown RBP15.23■□□□□ 0.03
VRK3-219ENST00000600137 AMHR2Q16671 573 aa15.23■□□□□ 0.03
VRK3-219ENST00000600137 FAM109BQ6ICB4 259 aaPredicted RBP15.23■□□□□ 0.03
VRK3-219ENST00000600137 CLEC17AQ6ZS10 378 aa15.23■□□□□ 0.03
VRK3-219ENST00000600137 SRGAP1Q7Z6B7 1085 aa15.23■□□□□ 0.03
VRK3-219ENST00000600137 GPBP1Q86WP2 473 aa15.23■□□□□ 0.03
VRK3-219ENST00000600137 NLRP7Q8WX94 980 aa15.23■□□□□ 0.03
VRK3-219ENST00000600137 APBB2Q92870 758 aa15.23■□□□□ 0.03
VRK3-219ENST00000600137 NTPCRQ9BSD7 190 aaKnown RBP15.23■□□□□ 0.03
VRK3-219ENST00000600137 GCOM2Q9BZD3 368 aaPredicted RBP15.23■□□□□ 0.03
VRK3-219ENST00000600137 GOLPH3LQ9H4A5 285 aa15.23■□□□□ 0.03
VRK3-219ENST00000600137 KBTBD4Q9NVX7 518 aa15.23■□□□□ 0.03
VRK3-219ENST00000600137 KCND2Q9NZV8 630 aa15.23■□□□□ 0.03
VRK3-219ENST00000600137 MYH11P35749 1972 aa15.23■□□□□ 0.03
VRK3-219ENST00000600137 EDN1P05305 212 aa15.22■□□□□ 0.03
VRK3-219ENST00000600137 PFKFB1P16118 471 aa15.22■□□□□ 0.03
VRK3-219ENST00000600137 HOXA11P31270 313 aaPredicted RBP15.22■□□□□ 0.03
VRK3-219ENST00000600137 ZNF131P52739 623 aa15.22■□□□□ 0.03
VRK3-219ENST00000600137 DEFB103AP81534 67 aa15.22■□□□□ 0.03
VRK3-219ENST00000600137 CACNB1Q02641 598 aaPredicted RBP15.22■□□□□ 0.03
VRK3-219ENST00000600137 IKBKEQ14164 716 aa15.22■□□□□ 0.03
VRK3-219ENST00000600137 CDCA2Q69YH5 1023 aaPredicted RBP15.22■□□□□ 0.03
VRK3-219ENST00000600137 KIFAP3Q92845 792 aa15.22■□□□□ 0.03
VRK3-219ENST00000600137 FIZ1Q96SL8 496 aa15.22■□□□□ 0.03
VRK3-219ENST00000600137 REEP2Q9BRK0 252 aa15.22■□□□□ 0.03
VRK3-219ENST00000600137 TIPINQ9BVW5 301 aa15.22■□□□□ 0.03
VRK3-219ENST00000600137 KCNH3Q9ULD8 1083 aa15.22■□□□□ 0.03
VRK3-219ENST00000600137 TTLL13PA6NNM8 815 aa15.21■□□□□ 0.03
VRK3-219ENST00000600137 GRXCR1A8MXD5 290 aa15.21■□□□□ 0.03
VRK3-219ENST00000600137 GPR182O15218 404 aa15.21■□□□□ 0.03
VRK3-219ENST00000600137 ACTN4O43707 911 aaKnown RBP15.21■□□□□ 0.03
VRK3-219ENST00000600137 ACTN1P12814 892 aa15.21■□□□□ 0.03
VRK3-219ENST00000600137 STAT6P42226 847 aa15.21■□□□□ 0.03
VRK3-219ENST00000600137 NAMPTP43490 491 aa15.21■□□□□ 0.03
VRK3-219ENST00000600137 NPTX2P47972 431 aa15.21■□□□□ 0.03
VRK3-219ENST00000600137 NDUFA8P51970 172 aa15.21■□□□□ 0.03
VRK3-219ENST00000600137 FAM189BP81408 668 aa15.21■□□□□ 0.03
VRK3-219ENST00000600137 MBTD1Q05BQ5 628 aa15.21■□□□□ 0.03
VRK3-219ENST00000600137 NFX1Q12986 1120 aaKnown RBP15.21■□□□□ 0.03
VRK3-219ENST00000600137 PAK2Q13177 524 aa15.21■□□□□ 0.03
VRK3-219ENST00000600137 LRIT3Q3SXY7 679 aa15.21■□□□□ 0.03
VRK3-219ENST00000600137 LONRF3Q496Y0 759 aa15.21■□□□□ 0.03
VRK3-219ENST00000600137 SV2BQ7L1I2 683 aa15.21■□□□□ 0.03
VRK3-219ENST00000600137 TAS1R3Q7RTX0 852 aa15.21■□□□□ 0.03
VRK3-219ENST00000600137 RASSF8Q8NHQ8 419 aa15.21■□□□□ 0.03
VRK3-219ENST00000600137 STAMQ92783 540 aa15.21■□□□□ 0.03
VRK3-219ENST00000600137 DHX58Q96C10 678 aa15.21■□□□□ 0.03
VRK3-219ENST00000600137 RNPC3Q96LT9 517 aaKnown RBP15.21■□□□□ 0.03
VRK3-219ENST00000600137 CCDC113Q9H0I3 377 aa15.21■□□□□ 0.03
VRK3-219ENST00000600137 TSPYL2Q9H2G4 693 aaPredicted RBP15.21■□□□□ 0.03
VRK3-219ENST00000600137 FZD8Q9H461 694 aa15.21■□□□□ 0.03
VRK3-219ENST00000600137 C9IYK1 514 aa15.2■□□□□ 0.02
VRK3-219ENST00000600137 GADD45BO75293 160 aaPredicted RBP15.2■□□□□ 0.02
VRK3-219ENST00000600137 PEX3P56589 373 aa15.2■□□□□ 0.02
VRK3-219ENST00000600137 TFDP1Q14186 410 aa15.2■□□□□ 0.02
VRK3-219ENST00000600137 CNNM4Q6P4Q7 775 aa15.2■□□□□ 0.02
VRK3-219ENST00000600137 FAM43BQ6ZT52 329 aaPredicted RBP15.2■□□□□ 0.02
VRK3-219ENST00000600137 TMCO2Q7Z6W1 182 aaPredicted RBP15.2■□□□□ 0.02
VRK3-219ENST00000600137 IQUBQ8NA54 791 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms