RNA–Protein interactions for RNA: ENST00000599560.5

NUP62-216, Transcript of nucleoporin 62, human

TSL 2

Gene NUP62, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-216	ENST00000599560	CCDC195	A0A1B0GUA6	201 aa		13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	DDX39A	O00148	427 aa	Known RBP	13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	HBP1	O60381	514 aa		13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	CD72	P21854	359 aa		13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	KLRC2	P26717	231 aa		13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	SLC11A1	P49279	550 aa		13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	POLG	P54098	1239 aa	Predicted RBP	13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	NLRP11	P59045	1033 aa	Known RBP	13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	SNW1	Q13573	536 aa	Known RBP	13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	ODR4	Q5SWX8	454 aa		13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	CWC27	Q6UX04	472 aa	Known RBP	13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	ABHD15	Q6UXT9	468 aa		13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	BBX	Q8WY36	941 aa	Predicted RBP	13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	RILPL2	Q969X0	211 aa		13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	ZNF707	Q96C28	371 aa	Predicted RBP	13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	PGBD1	Q96JS3	809 aa		13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	MYL10	Q9BUA6	226 aa		13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	SLC2A4RG	Q9NR83	387 aa		13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	TBC1D13	Q9NVG8	400 aa		13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	TAF6L	Q9Y6J9	622 aa		13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	NUMBL	Q9Y6R0	609 aa		13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	NFASC	O94856	1347 aa		13.83	□□□□□ -0.2
NUP62-216	ENST00000599560	hCG_1642624	A0A1W2PR95	340 aa		13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	ANHX	E9PGG2	379 aa		13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	LAMTOR5	O43504	91 aa		13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	NT5C2	P49902	561 aa		13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	GPC5	P78333	572 aa		13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	SPEM2	Q0P670	501 aa		13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	LPAL2	Q16609	132 aa		13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	IMMT	Q16891	758 aa	Known RBP	13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	ANKRD45	Q5TZF3	282 aa		13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	ZNF280B	Q86YH2	543 aa		13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	CMTR1	Q8N1G2	835 aa	Known RBP	13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	METTL13	Q8N6R0	699 aa		13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	GPR161	Q8N6U8	529 aa	Known RBP	13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	LINC01465	Q8N7H1	131 aa		13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	MXRA8	Q9BRK3	442 aa		13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	DDX23	Q9BUQ8	820 aa	Known RBP	13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	FBXO4	Q9UKT5	387 aa		13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	PCDHA6	Q9UN73	950 aa		13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	PCDHGA2	Q9Y5H1	932 aa		13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	PCDHA8	Q9Y5H6	950 aa		13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	ASPM	Q8IZT6	3477 aa		13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	COL1A2	P08123	1366 aa		13.82	□□□□□ -0.2
NUP62-216	ENST00000599560	SLC30A4	O14863	429 aa		13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	INPPL1	O15357	1258 aa		13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	SPATA31D3	P0C874	917 aa		13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	LAMP2	P13473	410 aa		13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	ZSCAN20	P17040	1043 aa	Predicted RBP	13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	AFF1	P51825	1210 aa	Known RBP	13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	GIT2	Q14161	759 aa		13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	BMS1	Q14692	1282 aa	Known RBP	13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	ZNF484	Q5JVG2	852 aa		13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	SPATA31D4	Q6ZUB0	917 aa		13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	TAS1R1	Q7RTX1	841 aa		13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	PPFIBP1	Q86W92	1011 aa		13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	LRRC71	Q8N4P6	559 aa		13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	CMAS	Q8NFW8	434 aa	Predicted RBP	13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	ATRIP	Q8WXE1	791 aa		13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	GBP3	Q9H0R5	595 aa		13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	CNNM2	Q9H8M5	875 aa		13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	PSTPIP2	Q9H939	334 aa		13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	AGO4	Q9HCK5	861 aa	Known RBP	13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	RCAN3	Q9UKA8	241 aa		13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	NOTCH4	Q99466	2003 aa		13.81	□□□□□ -0.2
NUP62-216	ENST00000599560	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	KANSL1L	A0AUZ9	987 aa		13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	C2CD2L	O14523	706 aa		13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	BACH1	O14867	736 aa		13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	IFIT3	O14879	490 aa	Known RBP	13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	MAFG	O15525	162 aa		13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	GDF9	O60383	454 aa		13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	PLEKHA8P1	O95397	391 aa		13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	EIF4B	P23588	611 aa	Known RBP	13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	NONO	Q15233	471 aa	Known RBP eCLIP	13.8	□□□□□ -0.2	5e-7	■■■□□ 18.2
NUP62-216	ENST00000599560	SWSAP1	Q6NVH7	229 aa		13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	PARM1	Q6UWI2	310 aa		13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	GET4	Q7L5D6	327 aa	Predicted RBP	13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	SMG7	Q92540	1137 aa	Known RBP	13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	FGF14	Q92915	247 aa		13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	TNPO1	Q92973	898 aa	Known RBP	13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	SDF4	Q9BRK5	362 aa		13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	DSCC1	Q9BVC3	393 aa		13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	MRPL9	Q9BYD2	267 aa	Known RBP	13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	ZSCAN32	Q9NX65	697 aa		13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	INPP5F	Q9Y2H2	1132 aa		13.8	□□□□□ -0.2
NUP62-216	ENST00000599560	SPEG	Q15772	3267 aa		13.79	□□□□□ -0.2
NUP62-216	ENST00000599560	SHISA7	A6NL88	538 aa		13.79	□□□□□ -0.2
NUP62-216	ENST00000599560	TEX28	O15482	410 aa		13.79	□□□□□ -0.2
NUP62-216	ENST00000599560	DHX15	O43143	795 aa	Known RBP	13.79	□□□□□ -0.2
NUP62-216	ENST00000599560	DDHD2	O94830	711 aa		13.79	□□□□□ -0.2
NUP62-216	ENST00000599560	PML	P29590	882 aa		13.79	□□□□□ -0.2
NUP62-216	ENST00000599560	SLC26A2	P50443	739 aa		13.79	□□□□□ -0.2
NUP62-216	ENST00000599560	ANTXR2	P58335	489 aa		13.79	□□□□□ -0.2
NUP62-216	ENST00000599560	UBXN2B	Q14CS0	331 aa		13.79	□□□□□ -0.2
NUP62-216	ENST00000599560	ACAP1	Q15027	740 aa		13.79	□□□□□ -0.2
NUP62-216	ENST00000599560	PDXDC2P	Q6P474	469 aa		13.79	□□□□□ -0.2
NUP62-216	ENST00000599560	SRBD1	Q8N5C6	995 aa	Known RBP	13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 449.3 ms