RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 PMS1P54277 932 aaKnown RBP12.61□□□□□ -0.39
SCN8A-208ENST00000599343 PDIA2Q13087 525 aaKnown RBP12.61□□□□□ -0.39
SCN8A-208ENST00000599343 GPS1Q13098 491 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 ZNF699Q32M78 642 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 ARL6IP4Q66PJ3 421 aaKnown RBP12.61□□□□□ -0.39
SCN8A-208ENST00000599343 TAGAPQ8N103 731 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 FLAD1Q8NFF5 587 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 SLC26A7Q8TE54 656 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 ULK4Q96C45 1275 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 OSBPL9Q96SU4 736 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 SERPINB2P05120 415 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 BRAFP15056 766 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 CIITAP33076 1130 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 PRCPP42785 496 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 AARSP49588 968 aaKnown RBP eCLIP12.6□□□□□ -0.39
SCN8A-208ENST00000599343 KRT39Q6A163 491 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 CATSPER4Q7RTX7 472 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 ZBED8Q8IZ13 594 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 TTC8Q8TAM2 541 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 PPP1R36Q96LQ0 422 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 FAM213AQ9BRX8 229 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 AFF4Q9UHB7 1163 aaKnown RBP12.6□□□□□ -0.39
SCN8A-208ENST00000599343 USP27XA6NNY8 438 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 E9PMD0 336 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 F8W8V4 182 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 PARP9Q8IXQ6 854 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 PI4KBQ9UBF8 816 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.6□□□□□ -0.39
SCN8A-208ENST00000599343 MIF4GDA9UHW6 222 aaKnown RBP12.6□□□□□ -0.39
SCN8A-208ENST00000599343 PSMC1P62191 440 aaKnown RBP12.6□□□□□ -0.39
SCN8A-208ENST00000599343 AP1B1Q10567 949 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 NFX1Q12986 1120 aaKnown RBP12.6□□□□□ -0.39
SCN8A-208ENST00000599343 MDH1BQ5I0G3 518 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 ICA1LQ8NDH6 482 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 CPVLQ9H3G5 476 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 ETNK1Q9HBU6 452 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 ALG13Q9NP73 1137 aaKnown RBP12.6□□□□□ -0.39
SCN8A-208ENST00000599343 NDE1Q9NXR1 346 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 PCDHA6Q9UN73 950 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 PCDHA8Q9Y5H6 950 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 ARHGEF37A1IGU5 675 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 CFAP69A5D8W1 941 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 SLC16A4O15374 487 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 ZSCAN9O15535 394 aaPredicted RBP12.6□□□□□ -0.39
SCN8A-208ENST00000599343 ARHGEF9O43307 516 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 SEC24DO94855 1032 aaPredicted RBP12.6□□□□□ -0.39
SCN8A-208ENST00000599343 PCYT1AP49585 367 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 KIAA1755Q5JYT7 1200 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 SCN4BQ8IWT1 228 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 USP17L5A8MUK1 530 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 ICE2Q659A1 982 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 LRRC8EQ6NSJ5 796 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 NDUFAF2Q8N183 169 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 ZNF341Q9BYN7 854 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 CHCHD3Q9NX63 227 aaKnown RBP12.6□□□□□ -0.39
SCN8A-208ENST00000599343 GGT7Q9UJ14 662 aa12.6□□□□□ -0.39
SCN8A-208ENST00000599343 M0QYV0 167 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 CYP2D6P10635 497 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 RASGRF1Q13972 1273 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 TMEM35BQ8NCS4 154 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 ATXN7L3BQ96GX2 97 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 NEDD4P46934 1319 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 LDHAP00338 332 aaKnown RBP12.59□□□□□ -0.39
SCN8A-208ENST00000599343 RANBP1P43487 201 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 KCNH2Q12809 1159 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 NAA30Q147X3 362 aaPredicted RBP12.59□□□□□ -0.39
SCN8A-208ENST00000599343 TEX2Q8IWB9 1127 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 RAD54LQ92698 747 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 ATP6V0A4Q9HBG4 840 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 ZCCHC17Q9NP64 241 aaKnown RBP12.59□□□□□ -0.39
SCN8A-208ENST00000599343 E5RI56 91 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 VCPP55072 806 aaKnown RBP12.59□□□□□ -0.39
SCN8A-208ENST00000599343 COASYQ13057 564 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 CUL3Q13618 768 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 TFDP2Q14188 446 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 TEDDM1Q5T9Z0 273 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 RNF219Q5W0B1 726 aaPredicted RBP12.59□□□□□ -0.39
SCN8A-208ENST00000599343 TBC1D9BQ66K14 1250 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 DDIASQ8IXT1 998 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 TTC13Q8NBP0 860 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 EGFL8Q99944 293 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 CLDN3O15551 220 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 KRT14P02533 472 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 KCNA4P22459 653 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 SMARCA1P28370 1054 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 PTPN12Q05209 780 aaKnown RBP12.59□□□□□ -0.39
SCN8A-208ENST00000599343 NR1H3Q13133 447 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 C1orf228Q6PIY5 440 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 OXER1Q8TDS5 423 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 SH3RF3Q8TEJ3 882 aaPredicted RBP12.59□□□□□ -0.39
SCN8A-208ENST00000599343 DHX36Q9H2U1 1008 aaKnown RBP12.59□□□□□ -0.39
SCN8A-208ENST00000599343 CASS4Q9NQ75 786 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 ABCB11O95342 1321 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 NECTIN1Q15223 517 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 SUPT20HL1Q3ZLR7 823 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 ANO5Q75V66 913 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 ARHGEF25Q86VW2 580 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 NLGN1Q8N2Q7 840 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 ZNF507Q8TCN5 953 aa12.59□□□□□ -0.39
SCN8A-208ENST00000599343 C1orf54Q8WWF1 131 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms