RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 ZNF558Q96NG5 402 aa12.43□□□□□ -0.42
GRAMD1A-209ENST00000598580 MAP7D2Q96T17 732 aa12.43□□□□□ -0.42
GRAMD1A-209ENST00000598580 CDCA3Q99618 268 aaPredicted RBP12.43□□□□□ -0.42
GRAMD1A-209ENST00000598580 FDXACB1Q9BRP7 624 aaPredicted RBP12.43□□□□□ -0.42
GRAMD1A-209ENST00000598580 SH3GLB2Q9NR46 395 aa12.43□□□□□ -0.42
GRAMD1A-209ENST00000598580 SPG21Q9NZD8 308 aa12.43□□□□□ -0.42
GRAMD1A-209ENST00000598580 PCDHA4Q9UN74 947 aa12.43□□□□□ -0.42
GRAMD1A-209ENST00000598580 CEP131Q9UPN4 1083 aa12.43□□□□□ -0.42
GRAMD1A-209ENST00000598580 MYH9P35579 1960 aaKnown RBP12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 PDGFBP01127 241 aaPredicted RBP12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 WEE2P0C1S8 567 aa12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 ZSCAN20P17040 1043 aaPredicted RBP12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 TMOD1P28289 359 aa12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 JAK3P52333 1124 aa12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 VCPP55072 806 aaKnown RBP12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 BCAR1P56945 870 aa12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 TBC1D8BQ0IIM8 1120 aa12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 TCF15Q12870 199 aa12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 PDE12Q6L8Q7 609 aaKnown RBP12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 RUFY3Q7L099 469 aa12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 MIER3Q7Z3K6 550 aa12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 LRRC43Q8N309 656 aa12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 C12orf76Q8N812 135 aaPredicted RBP12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 NLRP7Q8WX94 980 aa12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 PBXIP1Q96AQ6 731 aa12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 TEKT3Q9BXF9 490 aa12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 SMOC2Q9H3U7 446 aa12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 KCNJ14Q9UNX9 436 aa12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 HCFC2Q9Y5Z7 792 aa12.42□□□□□ -0.42
GRAMD1A-209ENST00000598580 DDX11L8A8MPP1 907 aa12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 MAFO75444 373 aaPredicted RBP12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 EOMESO95936 686 aa12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 SFNP31947 248 aa12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 PHKA2P46019 1235 aa12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 NPEPPSP55786 919 aa12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 AKAP17AQ02040 695 aaKnown RBP12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 INF2Q27J81 1249 aa12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 XKR3Q5GH77 459 aa12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 EARS2Q5JPH6 523 aaKnown RBP12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 PLA2G4FQ68DD2 849 aa12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 TMC7Q7Z402 723 aa12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 BLIDQ8IZY5 108 aa12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 DAGLBQ8NCG7 672 aa12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 CCDC148Q8NFR7 591 aa12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 OXER1Q8TDS5 423 aa12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 TRAIPQ9BWF2 469 aa12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 NRDE2Q9H7Z3 1164 aa12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 MINDY3Q9H8M7 445 aa12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 IFT122Q9HBG6 1241 aa12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 NGRNQ9NPE2 291 aaKnown RBP12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 ENTPD7Q9NQZ7 604 aa12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 SUCLA2Q9P2R7 463 aaPredicted RBP12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 SEPT9Q9UHD8 586 aaPredicted RBP12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 PUF60Q9UHX1 559 aaKnown RBP12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 VAV3Q9UKW4 847 aa12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 WDR81Q562E7 1941 aa12.41□□□□□ -0.42
GRAMD1A-209ENST00000598580 ZBTB39O15060 712 aa12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 HOXA2O43364 376 aa12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 OFD1O75665 1012 aa12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 PSMA5P28066 241 aa12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 HOXA11P31270 313 aaPredicted RBP12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 SSRP1Q08945 709 aaKnown RBP12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 STK3Q13188 491 aa12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 PTPN21Q16825 1174 aa12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 UBXN11Q5T124 520 aa12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 ZNF280BQ86YH2 543 aa12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 FBXL6Q8N531 539 aa12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 SLC22A17Q8WUG5 538 aa12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 HAS1Q92839 578 aa12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 ZNF274Q96GC6 653 aaPredicted RBP12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 GCOM2Q9BZD3 368 aaPredicted RBP12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 KCNH6Q9H252 994 aa12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 POMKQ9H5K3 350 aa12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 CHST12Q9NRB3 414 aa12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 TBC1D13Q9NVG8 400 aa12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 RNF216Q9NWF9 866 aaPredicted RBP12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 DNAJB4Q9UDY4 337 aa12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 TCEAL9Q9UHQ7 104 aa12.4□□□□□ -0.42
GRAMD1A-209ENST00000598580 WDR87Q6ZQQ6 2873 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 FAM205CA6NFA0 338 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 C2CD4DB7Z1M9 353 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 CTDNEP1O95476 244 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 CXCL14O95715 111 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 GALTP07902 379 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 EPCAMP16422 314 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 PPM1AP35813 382 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 KRT17Q04695 432 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 SIGLEC14Q08ET2 396 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 AGMOQ6ZNB7 445 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 RHPN2Q8IUC4 686 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 ABI1Q8IZP0 508 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 VPS52Q8N1B4 723 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 ZNF710Q8N1W2 664 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 RDM1Q8NG50 284 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 IGSF21Q96ID5 467 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 SCLT1Q96NL6 688 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 PHF20Q9BVI0 1012 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 ZBP1Q9H171 429 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 ADAM7Q9H2U9 754 aa12.39□□□□□ -0.43
GRAMD1A-209ENST00000598580 KCNMB3Q9NPA1 279 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms