RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 SUCLA2Q9P2R7 463 aaPredicted RBP21.22■□□□□ 0.99
SNRPA-204ENST00000598452 PUF60Q9UHX1 559 aaKnown RBP21.22■□□□□ 0.99
SNRPA-204ENST00000598452 LZTS1Q9Y250 596 aa21.22■□□□□ 0.99
SNRPA-204ENST00000598452 MAFO75444 373 aaPredicted RBP21.21■□□□□ 0.99
SNRPA-204ENST00000598452 LONRF3Q496Y0 759 aa21.21■□□□□ 0.99
SNRPA-204ENST00000598452 HERC4Q5GLZ8 1057 aaPredicted RBP21.21■□□□□ 0.99
SNRPA-204ENST00000598452 RHPN2Q8IUC4 686 aa21.21■□□□□ 0.99
SNRPA-204ENST00000598452 OXER1Q8TDS5 423 aa21.21■□□□□ 0.99
SNRPA-204ENST00000598452 CDCA3Q99618 268 aaPredicted RBP21.21■□□□□ 0.99
SNRPA-204ENST00000598452 PHF20Q9BVI0 1012 aa21.21■□□□□ 0.99
SNRPA-204ENST00000598452 VAV3Q9UKW4 847 aa21.21■□□□□ 0.99
SNRPA-204ENST00000598452 TPCN1Q9ULQ1 816 aa21.21■□□□□ 0.99
SNRPA-204ENST00000598452 CCDC194A0A1B0GVG4 234 aa21.2■□□□□ 0.98
SNRPA-204ENST00000598452 CDKL5O76039 1030 aa21.2■□□□□ 0.98
SNRPA-204ENST00000598452 EOMESO95936 686 aa21.2■□□□□ 0.98
SNRPA-204ENST00000598452 XBP1P17861 261 aa21.2■□□□□ 0.98
SNRPA-204ENST00000598452 DNM2P50570 870 aa21.2■□□□□ 0.98
SNRPA-204ENST00000598452 PSMC5P62195 406 aa21.2■□□□□ 0.98
SNRPA-204ENST00000598452 CDC42EP1Q00587 391 aa21.2■□□□□ 0.98
SNRPA-204ENST00000598452 LLGL2Q6P1M3 1020 aa21.2■□□□□ 0.98
SNRPA-204ENST00000598452 HFE2Q6ZVN8 426 aa21.2■□□□□ 0.98
SNRPA-204ENST00000598452 ZNF579Q8NAF0 562 aaKnown RBP21.2■□□□□ 0.98
SNRPA-204ENST00000598452 LPPQ93052 612 aa21.2■□□□□ 0.98
SNRPA-204ENST00000598452 APOL5Q9BWW9 433 aa21.2■□□□□ 0.98
SNRPA-204ENST00000598452 SLKQ9H2G2 1235 aaPredicted RBP21.2■□□□□ 0.98
SNRPA-204ENST00000598452 KCNMB3Q9NPA1 279 aa21.2■□□□□ 0.98
SNRPA-204ENST00000598452 DACT1Q9NYF0 836 aa21.2■□□□□ 0.98
SNRPA-204ENST00000598452 SPG21Q9NZD8 308 aa21.2■□□□□ 0.98
SNRPA-204ENST00000598452 LOC730098B7Z3J9 87 aa21.19■□□□□ 0.98
SNRPA-204ENST00000598452 NT5C1B-RDH14C9J2C7 533 aa21.19■□□□□ 0.98
SNRPA-204ENST00000598452 HOXD11P31277 338 aaPredicted RBP21.19■□□□□ 0.98
SNRPA-204ENST00000598452 PPM1AP35813 382 aa21.19■□□□□ 0.98
SNRPA-204ENST00000598452 NPEPPSP55786 919 aa21.19■□□□□ 0.98
SNRPA-204ENST00000598452 KRT17Q04695 432 aa21.19■□□□□ 0.98
SNRPA-204ENST00000598452 KCNC3Q14003 757 aa21.19■□□□□ 0.98
SNRPA-204ENST00000598452 TMC7Q7Z402 723 aa21.19■□□□□ 0.98
SNRPA-204ENST00000598452 NEK8Q86SG6 692 aa21.19■□□□□ 0.98
SNRPA-204ENST00000598452 SLC39A11Q8N1S5 342 aa21.19■□□□□ 0.98
SNRPA-204ENST00000598452 RPGRIP1Q96KN7 1286 aa21.19■□□□□ 0.98
SNRPA-204ENST00000598452 NLRP4Q96MN2 994 aa21.19■□□□□ 0.98
SNRPA-204ENST00000598452 NGRNQ9NPE2 291 aaKnown RBP21.19■□□□□ 0.98
SNRPA-204ENST00000598452 CHST12Q9NRB3 414 aa21.19■□□□□ 0.98
SNRPA-204ENST00000598452 WRAP73Q9P2S5 460 aaPredicted RBP21.19■□□□□ 0.98
SNRPA-204ENST00000598452 FSD2A1L4K1 749 aa21.18■□□□□ 0.98
SNRPA-204ENST00000598452 MEIS3P2A8K0S8 358 aa21.18■□□□□ 0.98
SNRPA-204ENST00000598452 SFPQP23246 707 aaKnown RBP eCLIP21.18■□□□□ 0.98
SNRPA-204ENST00000598452 TECP42680 631 aa21.18■□□□□ 0.98
SNRPA-204ENST00000598452 PHKA2P46019 1235 aa21.18■□□□□ 0.98
SNRPA-204ENST00000598452 PPP2R5CQ13362 524 aa21.18■□□□□ 0.98
SNRPA-204ENST00000598452 EARS2Q5JPH6 523 aaKnown RBP21.18■□□□□ 0.98
SNRPA-204ENST00000598452 TWF2Q6IBS0 349 aaKnown RBP21.18■□□□□ 0.98
SNRPA-204ENST00000598452 ANKRD54Q6NXT1 300 aa21.18■□□□□ 0.98
SNRPA-204ENST00000598452 PIK3AP1Q6ZUJ8 805 aa21.18■□□□□ 0.98
SNRPA-204ENST00000598452 ZNF410Q86VK4 478 aa21.18■□□□□ 0.98
SNRPA-204ENST00000598452 SUSD6Q92537 303 aa21.18■□□□□ 0.98
SNRPA-204ENST00000598452 PHF7Q9BWX1 381 aaPredicted RBP21.18■□□□□ 0.98
SNRPA-204ENST00000598452 S1PR5Q9H228 398 aa21.18■□□□□ 0.98
SNRPA-204ENST00000598452 CYP26B1Q9NR63 512 aa21.18■□□□□ 0.98
SNRPA-204ENST00000598452 PIN4Q9Y237 131 aaKnown RBP21.18■□□□□ 0.98
SNRPA-204ENST00000598452 CCNT1O60563 726 aaKnown RBP21.17■□□□□ 0.98
SNRPA-204ENST00000598452 PFKFB2O60825 505 aa21.17■□□□□ 0.98
SNRPA-204ENST00000598452 EIF5BO60841 1220 aaKnown RBP21.17■□□□□ 0.98
SNRPA-204ENST00000598452 CTDNEP1O95476 244 aa21.17■□□□□ 0.98
SNRPA-204ENST00000598452 QARSP47897 775 aaKnown RBP21.17■□□□□ 0.98
SNRPA-204ENST00000598452 BCAR1P56945 870 aa21.17■□□□□ 0.98
SNRPA-204ENST00000598452 CBX2Q14781 532 aaPredicted RBP21.17■□□□□ 0.98
SNRPA-204ENST00000598452 SYCE2Q6PIF2 218 aa21.17■□□□□ 0.98
SNRPA-204ENST00000598452 TMEM184AQ6ZMB5 413 aa21.17■□□□□ 0.98
SNRPA-204ENST00000598452 EDAQ92838 391 aa21.17■□□□□ 0.98
SNRPA-204ENST00000598452 HAS1Q92839 578 aa21.17■□□□□ 0.98
SNRPA-204ENST00000598452 FAM20AQ96MK3 541 aa21.17■□□□□ 0.98
SNRPA-204ENST00000598452 BMP2KQ9NSY1 1161 aaPredicted RBP21.17■□□□□ 0.98
SNRPA-204ENST00000598452 STK36Q9NRP7 1315 aa21.17■□□□□ 0.98
SNRPA-204ENST00000598452 FAM205CA6NFA0 338 aa21.16■□□□□ 0.98
SNRPA-204ENST00000598452 PPP4R3AQ6IN85 833 aa21.16■□□□□ 0.98
SNRPA-204ENST00000598452 CATSPER4Q7RTX7 472 aa21.16■□□□□ 0.98
SNRPA-204ENST00000598452 TMEM173Q86WV6 379 aaPredicted RBP21.16■□□□□ 0.98
SNRPA-204ENST00000598452 MRPL43Q8N983 215 aaKnown RBP21.16■□□□□ 0.98
SNRPA-204ENST00000598452 TMEM143Q96AN5 459 aa21.16■□□□□ 0.98
SNRPA-204ENST00000598452 CEP170P1Q96L14 293 aa21.16■□□□□ 0.98
SNRPA-204ENST00000598452 MRPL9Q9BYD2 267 aaKnown RBP21.16■□□□□ 0.98
SNRPA-204ENST00000598452 INO80BQ9C086 356 aaPredicted RBP21.16■□□□□ 0.98
SNRPA-204ENST00000598452 IFT122Q9HBG6 1241 aa21.16■□□□□ 0.98
SNRPA-204ENST00000598452 FAM105AQ9NUU6 356 aa21.16■□□□□ 0.98
SNRPA-204ENST00000598452 RGL1Q9NZL6 768 aa21.16■□□□□ 0.98
SNRPA-204ENST00000598452 CDH22Q9UJ99 828 aa21.16■□□□□ 0.98
SNRPA-204ENST00000598452 C2orf71A6NGG8 1288 aa21.15■□□□□ 0.98
SNRPA-204ENST00000598452 DKC1O60832 514 aaKnown RBP eCLIP21.15■□□□□ 0.98
SNRPA-204ENST00000598452 ZC3H11AO75152 810 aaKnown RBP eCLIP21.15■□□□□ 0.98
SNRPA-204ENST00000598452 P4HBP07237 508 aaKnown RBP21.15■□□□□ 0.98
SNRPA-204ENST00000598452 GCFC2P16383 781 aaKnown RBP21.15■□□□□ 0.98
SNRPA-204ENST00000598452 CA8P35219 290 aa21.15■□□□□ 0.98
SNRPA-204ENST00000598452 ALDH7A1P49419 539 aaKnown RBP21.15■□□□□ 0.98
SNRPA-204ENST00000598452 SMC1AQ14683 1233 aaKnown RBP21.15■□□□□ 0.98
SNRPA-204ENST00000598452 ANKRD1Q15327 319 aa21.15■□□□□ 0.98
SNRPA-204ENST00000598452 POTEDQ86YR6 584 aa21.15■□□□□ 0.98
SNRPA-204ENST00000598452 NAP1L4Q99733 375 aaKnown RBP21.15■□□□□ 0.98
SNRPA-204ENST00000598452 JPH2Q9BR39 696 aaPredicted RBP21.15■□□□□ 0.98
SNRPA-204ENST00000598452 TRAIPQ9BWF2 469 aa21.15■□□□□ 0.98
SNRPA-204ENST00000598452 ORC3Q9UBD5 711 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms