RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 UBE3AQ05086 875 aa25.73■■□□□ 1.71
SSBP4-205ENST00000598159 EP400NLQ6ZTU2 488 aa25.73■■□□□ 1.71
SSBP4-205ENST00000598159 ABI1Q8IZP0 508 aa25.73■■□□□ 1.71
SSBP4-205ENST00000598159 ZNF579Q8NAF0 562 aaKnown RBP25.73■■□□□ 1.71
SSBP4-205ENST00000598159 C8orf76Q96K31 380 aa25.73■■□□□ 1.71
SSBP4-205ENST00000598159 MTMR9Q96QG7 549 aa25.73■■□□□ 1.71
SSBP4-205ENST00000598159 EIF2AK1Q9BQI3 630 aaKnown RBP25.73■■□□□ 1.71
SSBP4-205ENST00000598159 TRAIPQ9BWF2 469 aa25.73■■□□□ 1.71
SSBP4-205ENST00000598159 CWH43Q9H720 699 aa25.73■■□□□ 1.71
SSBP4-205ENST00000598159 ASAP2O43150 1006 aa25.72■■□□□ 1.71
SSBP4-205ENST00000598159 DNAJB1P25685 340 aa25.72■■□□□ 1.71
SSBP4-205ENST00000598159 TXKP42681 527 aa25.72■■□□□ 1.71
SSBP4-205ENST00000598159 CYP4A11Q02928 519 aa25.72■■□□□ 1.71
SSBP4-205ENST00000598159 HYAL1Q12794 435 aa25.72■■□□□ 1.71
SSBP4-205ENST00000598159 CTC1Q2NKJ3 1217 aa25.72■■□□□ 1.71
SSBP4-205ENST00000598159 XKR9Q5GH70 373 aa25.72■■□□□ 1.71
SSBP4-205ENST00000598159 KSR1Q8IVT5 923 aa25.72■■□□□ 1.71
SSBP4-205ENST00000598159 TCP11Q8WWU5 503 aa25.72■■□□□ 1.71
SSBP4-205ENST00000598159 HSD17B14Q9BPX1 270 aa25.72■■□□□ 1.71
SSBP4-205ENST00000598159 CLDND1Q9NY35 253 aa25.72■■□□□ 1.71
SSBP4-205ENST00000598159 COL4A3BPQ9Y5P4 624 aa25.72■■□□□ 1.71
SSBP4-205ENST00000598159 MUC3AQ02505 3323 aa25.71■■□□□ 1.71
SSBP4-205ENST00000598159 LYPLA2O95372 231 aa25.71■■□□□ 1.71
SSBP4-205ENST00000598159 SKIP12755 728 aa25.71■■□□□ 1.71
SSBP4-205ENST00000598159 LAG3P18627 525 aa25.71■■□□□ 1.71
SSBP4-205ENST00000598159 RBM25P49756 843 aaKnown RBP25.71■■□□□ 1.71
SSBP4-205ENST00000598159 GUCY1B3Q02153 619 aa25.71■■□□□ 1.71
SSBP4-205ENST00000598159 PTCRAQ6ISU1 281 aaPredicted RBP25.71■■□□□ 1.71
SSBP4-205ENST00000598159 ZNF598Q86UK7 904 aaKnown RBP25.71■■□□□ 1.71
SSBP4-205ENST00000598159 COLGALT1Q8NBJ5 622 aa25.71■■□□□ 1.71
SSBP4-205ENST00000598159 PSPC1Q8WXF1 523 aaKnown RBP25.71■■□□□ 1.71
SSBP4-205ENST00000598159 NLRP4Q96MN2 994 aa25.71■■□□□ 1.71
SSBP4-205ENST00000598159 FOXP1Q9H334 677 aaPredicted RBP25.71■■□□□ 1.71
SSBP4-205ENST00000598159 IFT122Q9HBG6 1241 aa25.71■■□□□ 1.71
SSBP4-205ENST00000598159 RNF19AQ9NV58 838 aa25.71■■□□□ 1.71
SSBP4-205ENST00000598159 ATG2AQ2TAZ0 1938 aa25.71■■□□□ 1.71
SSBP4-205ENST00000598159 GRXCR2A6NFK2 248 aa25.7■■□□□ 1.7
SSBP4-205ENST00000598159 SRGAP1Q7Z6B7 1085 aa25.7■■□□□ 1.7
SSBP4-205ENST00000598159 THNSL1Q8IYQ7 743 aa25.7■■□□□ 1.7
SSBP4-205ENST00000598159 FAM184AQ8NB25 1140 aa25.7■■□□□ 1.7
SSBP4-205ENST00000598159 PRPF31Q8WWY3 499 aaKnown RBP25.7■■□□□ 1.7
SSBP4-205ENST00000598159 TMEM143Q96AN5 459 aa25.7■■□□□ 1.7
SSBP4-205ENST00000598159 FAM50BQ9Y247 325 aa25.7■■□□□ 1.7
SSBP4-205ENST00000598159 H3BQ06 376 aaPredicted RBP25.69■■□□□ 1.7
SSBP4-205ENST00000598159 WNT7AO00755 349 aa25.69■■□□□ 1.7
SSBP4-205ENST00000598159 ZBTB39O15060 712 aa25.69■■□□□ 1.7
SSBP4-205ENST00000598159 FGF18O76093 207 aa25.69■■□□□ 1.7
SSBP4-205ENST00000598159 LRRC55Q6ZSA7 311 aa25.69■■□□□ 1.7
SSBP4-205ENST00000598159 CATSPER4Q7RTX7 472 aa25.69■■□□□ 1.7
SSBP4-205ENST00000598159 RNF169Q8NCN4 708 aa25.69■■□□□ 1.7
SSBP4-205ENST00000598159 FBXO18Q8NFZ0 1043 aa25.69■■□□□ 1.7
SSBP4-205ENST00000598159 RSPH1Q8WYR4 309 aa25.69■■□□□ 1.7
SSBP4-205ENST00000598159 IGFLR1Q9H665 355 aa25.69■■□□□ 1.7
SSBP4-205ENST00000598159 ANKEF1Q9NU02 776 aa25.69■■□□□ 1.7
SSBP4-205ENST00000598159 SRGAP2CP0DJJ0 459 aa25.68■■□□□ 1.7
SSBP4-205ENST00000598159 XRCC6P12956 609 aaKnown RBP eCLIP25.68■■□□□ 1.7
SSBP4-205ENST00000598159 ATP2B1P20020 1258 aa25.68■■□□□ 1.7
SSBP4-205ENST00000598159 MCM7P33993 719 aa25.68■■□□□ 1.7
SSBP4-205ENST00000598159 LTBRP36941 435 aa25.68■■□□□ 1.7
SSBP4-205ENST00000598159 PHKA2P46019 1235 aa25.68■■□□□ 1.7
SSBP4-205ENST00000598159 LAMTOR4Q0VGL1 99 aa25.68■■□□□ 1.7
SSBP4-205ENST00000598159 ADAM15Q13444 863 aa25.68■■□□□ 1.7
SSBP4-205ENST00000598159 EMC2Q15006 297 aa25.68■■□□□ 1.7
SSBP4-205ENST00000598159 TWF2Q6IBS0 349 aaKnown RBP25.68■■□□□ 1.7
SSBP4-205ENST00000598159 PDE12Q6L8Q7 609 aaKnown RBP25.68■■□□□ 1.7
SSBP4-205ENST00000598159 LRRC43Q8N309 656 aa25.68■■□□□ 1.7
SSBP4-205ENST00000598159 MICAL1Q8TDZ2 1067 aa25.68■■□□□ 1.7
SSBP4-205ENST00000598159 MTRQ99707 1265 aa25.68■■□□□ 1.7
SSBP4-205ENST00000598159 PUF60Q9UHX1 559 aaKnown RBP25.68■■□□□ 1.7
SSBP4-205ENST00000598159 PIN4Q9Y237 131 aaKnown RBP25.68■■□□□ 1.7
SSBP4-205ENST00000598159 LZTS1Q9Y250 596 aa25.68■■□□□ 1.7
SSBP4-205ENST00000598159 CSPG5O95196 566 aa25.67■■□□□ 1.7
SSBP4-205ENST00000598159 IRS1P35568 1242 aa25.67■■□□□ 1.7
SSBP4-205ENST00000598159 PLCB3Q01970 1234 aa25.67■■□□□ 1.7
SSBP4-205ENST00000598159 ORC2Q13416 577 aaPredicted RBP25.67■■□□□ 1.7
SSBP4-205ENST00000598159 CLLU1OSQ5K130 101 aa25.67■■□□□ 1.7
SSBP4-205ENST00000598159 FERMT3Q86UX7 667 aa25.67■■□□□ 1.7
SSBP4-205ENST00000598159 FAM178BQ8IXR5 827 aa25.67■■□□□ 1.7
SSBP4-205ENST00000598159 PLXNA4Q9HCM2 1894 aa25.67■■□□□ 1.7
SSBP4-205ENST00000598159 TLR9Q9NR96 1032 aa25.67■■□□□ 1.7
SSBP4-205ENST00000598159 HCSTQ9UBK5 93 aa25.67■■□□□ 1.7
SSBP4-205ENST00000598159 ZNF623O75123 536 aa25.66■■□□□ 1.7
SSBP4-205ENST00000598159 IL9P15248 144 aa25.66■■□□□ 1.7
SSBP4-205ENST00000598159 ATF7P17544 494 aaPredicted RBP25.66■■□□□ 1.7
SSBP4-205ENST00000598159 RAB27AP51159 221 aa25.66■■□□□ 1.7
SSBP4-205ENST00000598159 MXD4Q14582 209 aaPredicted RBP25.66■■□□□ 1.7
SSBP4-205ENST00000598159 RABEP1Q15276 862 aa25.66■■□□□ 1.7
SSBP4-205ENST00000598159 KCNT2Q6UVM3 1135 aa25.66■■□□□ 1.7
SSBP4-205ENST00000598159 ZNF558Q96NG5 402 aa25.66■■□□□ 1.7
SSBP4-205ENST00000598159 MRPL9Q9BYD2 267 aaKnown RBP25.66■■□□□ 1.7
SSBP4-205ENST00000598159 TMEM60Q9H2L4 133 aa25.66■■□□□ 1.7
SSBP4-205ENST00000598159 FAM105AQ9NUU6 356 aa25.66■■□□□ 1.7
SSBP4-205ENST00000598159 DGAT1O75907 488 aa25.65■■□□□ 1.7
SSBP4-205ENST00000598159 GTF2F1P35269 517 aaKnown RBP eCLIP25.65■■□□□ 1.71e-6■■■■□ 26.2
SSBP4-205ENST00000598159 KRT17Q04695 432 aa25.65■■□□□ 1.7
SSBP4-205ENST00000598159 POU5F1BQ06416 359 aa25.65■■□□□ 1.7
SSBP4-205ENST00000598159 GNL2Q13823 731 aaKnown RBP25.65■■□□□ 1.7
SSBP4-205ENST00000598159 EFHBQ8N7U6 833 aa25.65■■□□□ 1.7
SSBP4-205ENST00000598159 RNF149Q8NC42 400 aa25.65■■□□□ 1.7
SSBP4-205ENST00000598159 HELQQ8TDG4 1101 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms