RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 SUCLA2Q9P2R7 463 aaPredicted RBP17.2■□□□□ 0.34
XRCC1-206ENST00000597811 MTMR6Q9Y217 621 aa17.2■□□□□ 0.34
XRCC1-206ENST00000597811 STK24Q9Y6E0 443 aa17.2■□□□□ 0.34
XRCC1-206ENST00000597811 MRPL42Q9Y6G3 142 aaKnown RBP17.2■□□□□ 0.34
XRCC1-206ENST00000597811 VWA3AA6NCI4 1184 aa17.19■□□□□ 0.34
XRCC1-206ENST00000597811 GPR182O15218 404 aa17.19■□□□□ 0.34
XRCC1-206ENST00000597811 MAFO75444 373 aaPredicted RBP17.19■□□□□ 0.34
XRCC1-206ENST00000597811 BMP15O95972 392 aa17.19■□□□□ 0.34
XRCC1-206ENST00000597811 STAG3L1P0CL83 205 aa17.19■□□□□ 0.34
XRCC1-206ENST00000597811 RFC5P40937 340 aa17.19■□□□□ 0.34
XRCC1-206ENST00000597811 PRPHP41219 470 aa17.19■□□□□ 0.34
XRCC1-206ENST00000597811 SARSP49591 514 aaKnown RBP17.19■□□□□ 0.34
XRCC1-206ENST00000597811 GATMP50440 423 aa17.19■□□□□ 0.34
XRCC1-206ENST00000597811 ATP2C1P98194 919 aaPredicted RBP17.19■□□□□ 0.34
XRCC1-206ENST00000597811 RESTQ13127 1097 aa17.19■□□□□ 0.34
XRCC1-206ENST00000597811 DRP2Q13474 957 aa17.19■□□□□ 0.34
XRCC1-206ENST00000597811 PDIA5Q14554 519 aa17.19■□□□□ 0.34
XRCC1-206ENST00000597811 SF3A1Q15459 793 aaKnown RBP17.19■□□□□ 0.34
XRCC1-206ENST00000597811 PTPROQ16827 1216 aa17.19■□□□□ 0.34
XRCC1-206ENST00000597811 PAN2Q504Q3 1202 aaKnown RBP17.19■□□□□ 0.34
XRCC1-206ENST00000597811 ODR4Q5SWX8 454 aa17.19■□□□□ 0.34
XRCC1-206ENST00000597811 POTEGQ6S5H5 508 aa17.19■□□□□ 0.34
XRCC1-206ENST00000597811 RHPN2Q8IUC4 686 aa17.19■□□□□ 0.34
XRCC1-206ENST00000597811 CMTR2Q8IYT2 770 aaKnown RBP17.19■□□□□ 0.34
XRCC1-206ENST00000597811 ZNF579Q8NAF0 562 aaKnown RBP17.19■□□□□ 0.34
XRCC1-206ENST00000597811 NACC1Q96RE7 527 aa17.19■□□□□ 0.34
XRCC1-206ENST00000597811 UHRF1Q96T88 793 aaPredicted RBP17.19■□□□□ 0.34
XRCC1-206ENST00000597811 POLR3CQ9BUI4 534 aaPredicted RBP17.19■□□□□ 0.34
XRCC1-206ENST00000597811 ZSCAN16Q9H4T2 348 aaPredicted RBP17.19■□□□□ 0.34
XRCC1-206ENST00000597811 RGS18Q9NS28 235 aa17.19■□□□□ 0.34
XRCC1-206ENST00000597811 ANKEF1Q9NU02 776 aa17.19■□□□□ 0.34
XRCC1-206ENST00000597811 RWDD3Q9Y3V2 267 aa17.19■□□□□ 0.34
XRCC1-206ENST00000597811 PPME1Q9Y570 386 aa17.19■□□□□ 0.34
XRCC1-206ENST00000597811 DENND3A2RUS2 1198 aa17.18■□□□□ 0.34
XRCC1-206ENST00000597811 LYPLA2O95372 231 aa17.18■□□□□ 0.34
XRCC1-206ENST00000597811 RB1P06400 928 aa17.18■□□□□ 0.34
XRCC1-206ENST00000597811 RPA1P27694 616 aa17.18■□□□□ 0.34
XRCC1-206ENST00000597811 GPC3P51654 580 aa17.18■□□□□ 0.34
XRCC1-206ENST00000597811 FAM173BQ6P4H8 233 aa17.18■□□□□ 0.34
XRCC1-206ENST00000597811 TMEM143Q96AN5 459 aa17.18■□□□□ 0.34
XRCC1-206ENST00000597811 CDK5RAP3Q96JB5 506 aa17.18■□□□□ 0.34
XRCC1-206ENST00000597811 NLRP4Q96MN2 994 aa17.18■□□□□ 0.34
XRCC1-206ENST00000597811 NECAB3Q96P71 396 aaPredicted RBP17.18■□□□□ 0.34
XRCC1-206ENST00000597811 MTRQ99707 1265 aa17.18■□□□□ 0.34
XRCC1-206ENST00000597811 LRFN2Q9ULH4 789 aa17.18■□□□□ 0.34
XRCC1-206ENST00000597811 ARHGEF35A5YM69 484 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 PP2D1A8MPX8 630 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 C9IYK1 514 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 TNFRSF10AO00220 468 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 GRM6O15303 877 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 USO1O60763 962 aaKnown RBP17.17■□□□□ 0.34
XRCC1-206ENST00000597811 SPATA31C1P0DKV0 1188 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 CDC25AP30304 524 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 CDC42EP1Q00587 391 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 DSC3Q14574 896 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 EMC2Q15006 297 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 TIGD5Q53EQ6 642 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 FAM43BQ6ZT52 329 aaPredicted RBP17.17■□□□□ 0.34
XRCC1-206ENST00000597811 SLC24A5Q71RS6 500 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 MAEAQ7L5Y9 396 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 ZNF710Q8N1W2 664 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 RASSF8Q8NHQ8 419 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 TCP11Q8WWU5 503 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 PSPC1Q8WXF1 523 aaKnown RBP17.17■□□□□ 0.34
XRCC1-206ENST00000597811 C11orf84Q9BUA3 381 aaPredicted RBP17.17■□□□□ 0.34
XRCC1-206ENST00000597811 UBE2ZQ9H832 354 aaPredicted RBP17.17■□□□□ 0.34
XRCC1-206ENST00000597811 ATP6V0A4Q9HBG4 840 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 C1orf112Q9NSG2 853 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 KIAA1024Q9UPX6 916 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 PCDHB7Q9Y5E2 793 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 CLIC4Q9Y696 253 aa17.17■□□□□ 0.34
XRCC1-206ENST00000597811 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.16■□□□□ 0.34
XRCC1-206ENST00000597811 IGKV6-21A0A0C4DH24 114 aa17.16■□□□□ 0.34
XRCC1-206ENST00000597811 PDIA4P13667 645 aaKnown RBP17.16■□□□□ 0.34
XRCC1-206ENST00000597811 EIF4BP23588 611 aaKnown RBP17.16■□□□□ 0.34
XRCC1-206ENST00000597811 RARRES1P49788 294 aa17.16■□□□□ 0.34
XRCC1-206ENST00000597811 IL17AQ16552 155 aa17.16■□□□□ 0.34
XRCC1-206ENST00000597811 FOXD4L6Q3SYB3 417 aaPredicted RBP17.16■□□□□ 0.34
XRCC1-206ENST00000597811 TCEAL5Q5H9L2 206 aa17.16■□□□□ 0.34
XRCC1-206ENST00000597811 ARL6IP4Q66PJ3 421 aaKnown RBP17.16■□□□□ 0.34
XRCC1-206ENST00000597811 FOXD4L3Q6VB84 417 aaPredicted RBP17.16■□□□□ 0.34
XRCC1-206ENST00000597811 IGSF22Q8N9C0 903 aa17.16■□□□□ 0.34
XRCC1-206ENST00000597811 PLVAPQ9BX97 442 aa17.16■□□□□ 0.34
XRCC1-206ENST00000597811 GCOM2Q9BZD3 368 aaPredicted RBP17.16■□□□□ 0.34
XRCC1-206ENST00000597811 DDX19AQ9NUU7 478 aaKnown RBP17.16■□□□□ 0.34
XRCC1-206ENST00000597811 A0A087WZ62 844 aa17.15■□□□□ 0.34
XRCC1-206ENST00000597811 GAS2O43903 313 aaKnown RBP17.15■□□□□ 0.34
XRCC1-206ENST00000597811 DGAT1O75907 488 aa17.15■□□□□ 0.34
XRCC1-206ENST00000597811 SRGAP2CP0DJJ0 459 aa17.15■□□□□ 0.34
XRCC1-206ENST00000597811 XRCC6P12956 609 aaKnown RBP eCLIP17.15■□□□□ 0.34
XRCC1-206ENST00000597811 DARSP14868 501 aaKnown RBP17.15■□□□□ 0.34
XRCC1-206ENST00000597811 FAM102BQ5T8I3 360 aa17.15■□□□□ 0.34
XRCC1-206ENST00000597811 KSR1Q8IVT5 923 aa17.15■□□□□ 0.34
XRCC1-206ENST00000597811 PRPF31Q8WWY3 499 aaKnown RBP17.15■□□□□ 0.34
XRCC1-206ENST00000597811 ZNF396Q96N95 335 aaPredicted RBP17.15■□□□□ 0.34
XRCC1-206ENST00000597811 PLIN2Q99541 437 aa17.15■□□□□ 0.34
XRCC1-206ENST00000597811 FDXACB1Q9BRP7 624 aaPredicted RBP17.15■□□□□ 0.34
XRCC1-206ENST00000597811 NSUN3Q9H649 340 aaKnown RBP17.15■□□□□ 0.34
XRCC1-206ENST00000597811 DHX33Q9H6R0 707 aaKnown RBP17.15■□□□□ 0.34
XRCC1-206ENST00000597811 ALG13Q9NP73 1137 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms