RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 PRUNE2Q8WUY3 3088 aa18.61■□□□□ 0.57
SSBP4-204ENST00000597724 EPOPA6NHQ4 379 aa18.6■□□□□ 0.57
SSBP4-204ENST00000597724 RFXAPO00287 272 aa18.6■□□□□ 0.57
SSBP4-204ENST00000597724 HSP90AA1P07900 732 aaKnown RBP18.6■□□□□ 0.57
SSBP4-204ENST00000597724 SFPQP23246 707 aaKnown RBP eCLIP18.6■□□□□ 0.57
SSBP4-204ENST00000597724 POU5F1BQ06416 359 aa18.6■□□□□ 0.57
SSBP4-204ENST00000597724 SF3A1Q15459 793 aaKnown RBP18.6■□□□□ 0.57
SSBP4-204ENST00000597724 SRGAP1Q7Z6B7 1085 aa18.6■□□□□ 0.57
SSBP4-204ENST00000597724 RNF149Q8NC42 400 aa18.6■□□□□ 0.57
SSBP4-204ENST00000597724 CHST12Q9NRB3 414 aa18.6■□□□□ 0.57
SSBP4-204ENST00000597724 RNF216Q9NWF9 866 aaPredicted RBP18.6■□□□□ 0.57
SSBP4-204ENST00000597724 LRFN2Q9ULH4 789 aa18.6■□□□□ 0.57
SSBP4-204ENST00000597724 PCDHB7Q9Y5E2 793 aa18.6■□□□□ 0.57
SSBP4-204ENST00000597724 ADGRA3Q8IWK6 1321 aa18.59■□□□□ 0.57
SSBP4-204ENST00000597724 ARHGEF35A5YM69 484 aa18.59■□□□□ 0.57
SSBP4-204ENST00000597724 FAM173BQ6P4H8 233 aa18.59■□□□□ 0.57
SSBP4-204ENST00000597724 PADI6Q6TGC4 694 aa18.59■□□□□ 0.57
SSBP4-204ENST00000597724 CATSPER4Q7RTX7 472 aa18.59■□□□□ 0.57
SSBP4-204ENST00000597724 FIBCD1Q8N539 461 aa18.59■□□□□ 0.57
SSBP4-204ENST00000597724 MCPH1Q8NEM0 835 aa18.59■□□□□ 0.57
SSBP4-204ENST00000597724 ASAP3Q8TDY4 903 aa18.59■□□□□ 0.57
SSBP4-204ENST00000597724 C17orf80Q9BSJ5 609 aa18.59■□□□□ 0.57
SSBP4-204ENST00000597724 BHMT2Q9H2M3 363 aa18.59■□□□□ 0.57
SSBP4-204ENST00000597724 ZSCAN16Q9H4T2 348 aaPredicted RBP18.59■□□□□ 0.57
SSBP4-204ENST00000597724 ELAC1Q9H777 363 aaKnown RBP18.59■□□□□ 0.57
SSBP4-204ENST00000597724 MINDY3Q9H8M7 445 aa18.59■□□□□ 0.57
SSBP4-204ENST00000597724 TMEM161AQ9NX61 479 aa18.59■□□□□ 0.57
SSBP4-204ENST00000597724 MTUS1Q9ULD2 1270 aa18.59■□□□□ 0.57
SSBP4-204ENST00000597724 CLIC4Q9Y696 253 aa18.59■□□□□ 0.57
SSBP4-204ENST00000597724 REV3LO60673 3130 aa18.58■□□□□ 0.57
SSBP4-204ENST00000597724 E9PMD0 336 aa18.58■□□□□ 0.56
SSBP4-204ENST00000597724 CYP11B2P19099 503 aa18.58■□□□□ 0.56
SSBP4-204ENST00000597724 GLRA2P23416 452 aa18.58■□□□□ 0.56
SSBP4-204ENST00000597724 PHKA2P46019 1235 aa18.58■□□□□ 0.56
SSBP4-204ENST00000597724 PTENP60484 403 aa18.58■□□□□ 0.56
SSBP4-204ENST00000597724 CAPSQ13938 189 aa18.58■□□□□ 0.56
SSBP4-204ENST00000597724 TFDP1Q14186 410 aa18.58■□□□□ 0.56
SSBP4-204ENST00000597724 BTG3Q14201 252 aaPredicted RBP18.58■□□□□ 0.56
SSBP4-204ENST00000597724 HYIQ5T013 277 aa18.58■□□□□ 0.56
SSBP4-204ENST00000597724 MAEAQ7L5Y9 396 aa18.58■□□□□ 0.56
SSBP4-204ENST00000597724 IFNLR1Q8IU57 520 aaPredicted RBP18.58■□□□□ 0.56
SSBP4-204ENST00000597724 MAFAQ8NHW3 353 aaPredicted RBP18.58■□□□□ 0.56
SSBP4-204ENST00000597724 AK8Q96MA6 479 aa18.58■□□□□ 0.56
SSBP4-204ENST00000597724 SAMD11Q96NU1 681 aa18.58■□□□□ 0.56
SSBP4-204ENST00000597724 POLR3FQ9H1D9 316 aaPredicted RBP18.58■□□□□ 0.56
SSBP4-204ENST00000597724 GPRC5CQ9NQ84 441 aa18.58■□□□□ 0.56
SSBP4-204ENST00000597724 DNM3Q9UQ16 869 aa18.58■□□□□ 0.56
SSBP4-204ENST00000597724 A0A0U1RQF3 1178 aa18.57■□□□□ 0.56
SSBP4-204ENST00000597724 EYA4O95677 639 aa18.57■□□□□ 0.56
SSBP4-204ENST00000597724 LINC00271P0C7V0 271 aa18.57■□□□□ 0.56
SSBP4-204ENST00000597724 PDIA4P13667 645 aaKnown RBP18.57■□□□□ 0.56
SSBP4-204ENST00000597724 POU3F3P20264 500 aaPredicted RBP18.57■□□□□ 0.56
SSBP4-204ENST00000597724 IBSPP21815 317 aaPredicted RBP18.57■□□□□ 0.56
SSBP4-204ENST00000597724 IGFBP4P22692 258 aa18.57■□□□□ 0.56
SSBP4-204ENST00000597724 PTPAQ15257 358 aa18.57■□□□□ 0.56
SSBP4-204ENST00000597724 ECHDC2Q86YB7 292 aa18.57■□□□□ 0.56
SSBP4-204ENST00000597724 CMTR2Q8IYT2 770 aaKnown RBP18.57■□□□□ 0.56
SSBP4-204ENST00000597724 KCTD17Q8N5Z5 321 aa18.57■□□□□ 0.56
SSBP4-204ENST00000597724 TRAIPQ9BWF2 469 aa18.57■□□□□ 0.56
SSBP4-204ENST00000597724 DACT1Q9NYF0 836 aa18.57■□□□□ 0.56
SSBP4-204ENST00000597724 LPXNO60711 386 aa18.56■□□□□ 0.56
SSBP4-204ENST00000597724 GATMP50440 423 aa18.56■□□□□ 0.56
SSBP4-204ENST00000597724 GRB10Q13322 594 aa18.56■□□□□ 0.56
SSBP4-204ENST00000597724 EPC2Q52LR7 807 aa18.56■□□□□ 0.56
SSBP4-204ENST00000597724 FAM102BQ5T8I3 360 aa18.56■□□□□ 0.56
SSBP4-204ENST00000597724 KCNK18Q7Z418 384 aa18.56■□□□□ 0.56
SSBP4-204ENST00000597724 TMEM192Q8IY95 271 aa18.56■□□□□ 0.56
SSBP4-204ENST00000597724 CLP1Q92989 425 aaKnown RBP18.56■□□□□ 0.56
SSBP4-204ENST00000597724 PNMA5Q96PV4 448 aa18.56■□□□□ 0.56
SSBP4-204ENST00000597724 NFKBIZQ9BYH8 718 aa18.56■□□□□ 0.56
SSBP4-204ENST00000597724 AGPAT5Q9NUQ2 364 aa18.56■□□□□ 0.56
SSBP4-204ENST00000597724 PIN4Q9Y237 131 aaKnown RBP18.56■□□□□ 0.56
SSBP4-204ENST00000597724 EOMESO95936 686 aa18.55■□□□□ 0.56
SSBP4-204ENST00000597724 HOXA11P31270 313 aaPredicted RBP18.55■□□□□ 0.56
SSBP4-204ENST00000597724 LONP1P36776 959 aaKnown RBP18.55■□□□□ 0.56
SSBP4-204ENST00000597724 GRIN1Q05586 938 aa18.55■□□□□ 0.56
SSBP4-204ENST00000597724 PCBP1Q15365 356 aaKnown RBP eCLIP18.55■□□□□ 0.565e-7■■■□□ 17.8
SSBP4-204ENST00000597724 ZRSR1Q15695 479 aaKnown RBP18.55■□□□□ 0.56
SSBP4-204ENST00000597724 ZNF598Q86UK7 904 aaKnown RBP18.55■□□□□ 0.56
SSBP4-204ENST00000597724 SPRYD3Q8NCJ5 442 aa18.55■□□□□ 0.56
SSBP4-204ENST00000597724 FBXO22Q8NEZ5 403 aa18.55■□□□□ 0.56
SSBP4-204ENST00000597724 GDPD5Q8WTR4 605 aa18.55■□□□□ 0.56
SSBP4-204ENST00000597724 NT5C3AQ9H0P0 336 aa18.55■□□□□ 0.56
SSBP4-204ENST00000597724 MTCH2Q9Y6C9 303 aa18.55■□□□□ 0.56
SSBP4-204ENST00000597724 FNDC1Q4ZHG4 1894 aaPredicted RBP18.54■□□□□ 0.56
SSBP4-204ENST00000597724 NLRC5Q86WI3 1866 aa18.54■□□□□ 0.56
SSBP4-204ENST00000597724 A0A0C4DFX4 3053 aa18.54■□□□□ 0.56
SSBP4-204ENST00000597724 INO80B-WBP1J3KQ70 363 aa18.54■□□□□ 0.56
SSBP4-204ENST00000597724 SLC26A4O43511 780 aa18.54■□□□□ 0.56
SSBP4-204ENST00000597724 FGFR1P11362 822 aa18.54■□□□□ 0.56
SSBP4-204ENST00000597724 BMPR1AP36894 532 aa18.54■□□□□ 0.56
SSBP4-204ENST00000597724 UBA7P41226 1012 aa18.54■□□□□ 0.56
SSBP4-204ENST00000597724 CEBPZQ03701 1054 aaKnown RBP18.54■□□□□ 0.56
SSBP4-204ENST00000597724 MBTD1Q05BQ5 628 aa18.54■□□□□ 0.56
SSBP4-204ENST00000597724 PAN2Q504Q3 1202 aaKnown RBP18.54■□□□□ 0.56
SSBP4-204ENST00000597724 TWF2Q6IBS0 349 aaKnown RBP18.54■□□□□ 0.56
SSBP4-204ENST00000597724 CABP7Q86V35 215 aa18.54■□□□□ 0.56
SSBP4-204ENST00000597724 CDK5RAP3Q96JB5 506 aa18.54■□□□□ 0.56
SSBP4-204ENST00000597724 USP28Q96RU2 1077 aa18.54■□□□□ 0.56
SSBP4-204ENST00000597724 RNF19AQ9NV58 838 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms