RNA–Protein interactions for RNA: ENST00000597261.1

CHERP-206, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 674 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-206ENST00000597261 MCPH1Q8NEM0 835 aa18.23■□□□□ 0.51
CHERP-206ENST00000597261 ASAP3Q8TDY4 903 aa18.23■□□□□ 0.51
CHERP-206ENST00000597261 TGS1Q96RS0 853 aaKnown RBP18.23■□□□□ 0.51
CHERP-206ENST00000597261 ELAC1Q9H777 363 aaKnown RBP18.23■□□□□ 0.51
CHERP-206ENST00000597261 BMP2KQ9NSY1 1161 aaPredicted RBP18.23■□□□□ 0.51
CHERP-206ENST00000597261 DDX19AQ9NUU7 478 aaKnown RBP18.23■□□□□ 0.51
CHERP-206ENST00000597261 RNF216Q9NWF9 866 aaPredicted RBP18.23■□□□□ 0.51
CHERP-206ENST00000597261 MORC2Q9Y6X9 1032 aaPredicted RBP18.23■□□□□ 0.51
CHERP-206ENST00000597261 MYO9BQ13459 2157 aa18.23■□□□□ 0.51
CHERP-206ENST00000597261 A0A0U1RQF3 1178 aa18.22■□□□□ 0.51
CHERP-206ENST00000597261 ARHGEF35A5YM69 484 aa18.22■□□□□ 0.51
CHERP-206ENST00000597261 EPOPA6NHQ4 379 aa18.22■□□□□ 0.51
CHERP-206ENST00000597261 EYA4O95677 639 aa18.22■□□□□ 0.51
CHERP-206ENST00000597261 SFPQP23246 707 aaKnown RBP eCLIP18.22■□□□□ 0.51
CHERP-206ENST00000597261 PCBP1Q15365 356 aaKnown RBP eCLIP18.22■□□□□ 0.51
CHERP-206ENST00000597261 SPRED2Q7Z698 418 aa18.22■□□□□ 0.51
CHERP-206ENST00000597261 RNF149Q8NC42 400 aa18.22■□□□□ 0.51
CHERP-206ENST00000597261 CCDC43Q96MW1 224 aaKnown RBP18.22■□□□□ 0.51
CHERP-206ENST00000597261 PNMA5Q96PV4 448 aa18.22■□□□□ 0.51
CHERP-206ENST00000597261 NFKBIZQ9BYH8 718 aa18.22■□□□□ 0.51
CHERP-206ENST00000597261 BHMT2Q9H2M3 363 aa18.22■□□□□ 0.51
CHERP-206ENST00000597261 MINDY3Q9H8M7 445 aa18.22■□□□□ 0.51
CHERP-206ENST00000597261 CERS4Q9HA82 394 aa18.22■□□□□ 0.51
CHERP-206ENST00000597261 CHD7Q9P2D1 2997 aa18.22■□□□□ 0.51
CHERP-206ENST00000597261 MICAL3Q7RTP6 2002 aa18.22■□□□□ 0.51
CHERP-206ENST00000597261 SIP14410 1827 aa18.21■□□□□ 0.51
CHERP-206ENST00000597261 E9PMD0 336 aa18.21■□□□□ 0.51
CHERP-206ENST00000597261 USO1O60763 962 aaKnown RBP18.21■□□□□ 0.51
CHERP-206ENST00000597261 HSP90AA1P07900 732 aaKnown RBP18.21■□□□□ 0.51
CHERP-206ENST00000597261 LINC00271P0C7V0 271 aa18.21■□□□□ 0.51
CHERP-206ENST00000597261 HOXA11P31270 313 aaPredicted RBP18.21■□□□□ 0.51
CHERP-206ENST00000597261 LONP1P36776 959 aaKnown RBP18.21■□□□□ 0.51
CHERP-206ENST00000597261 TFDP1Q14186 410 aa18.21■□□□□ 0.51
CHERP-206ENST00000597261 ARNTL2Q8WYA1 636 aa18.21■□□□□ 0.51
CHERP-206ENST00000597261 CLP1Q92989 425 aaKnown RBP18.21■□□□□ 0.51
CHERP-206ENST00000597261 GPRC5CQ9NQ84 441 aa18.21■□□□□ 0.51
CHERP-206ENST00000597261 TMEM161AQ9NX61 479 aa18.21■□□□□ 0.51
CHERP-206ENST00000597261 RFXAPO00287 272 aa18.2■□□□□ 0.5
CHERP-206ENST00000597261 LPXNO60711 386 aa18.2■□□□□ 0.5
CHERP-206ENST00000597261 EOMESO95936 686 aa18.2■□□□□ 0.5
CHERP-206ENST00000597261 GRIN1Q05586 938 aa18.2■□□□□ 0.5
CHERP-206ENST00000597261 GRB10Q13322 594 aa18.2■□□□□ 0.5
CHERP-206ENST00000597261 CAPSQ13938 189 aa18.2■□□□□ 0.5
CHERP-206ENST00000597261 SLC39A14Q15043 492 aa18.2■□□□□ 0.5
CHERP-206ENST00000597261 MAEAQ7L5Y9 396 aa18.2■□□□□ 0.5
CHERP-206ENST00000597261 KCNK18Q7Z418 384 aa18.2■□□□□ 0.5
CHERP-206ENST00000597261 ZNF598Q86UK7 904 aaKnown RBP18.2■□□□□ 0.5
CHERP-206ENST00000597261 ECHDC2Q86YB7 292 aa18.2■□□□□ 0.5
CHERP-206ENST00000597261 FIBCD1Q8N539 461 aa18.2■□□□□ 0.5
CHERP-206ENST00000597261 SAMD11Q96NU1 681 aa18.2■□□□□ 0.5
CHERP-206ENST00000597261 GAS2L1Q99501 681 aaPredicted RBP18.2■□□□□ 0.5
CHERP-206ENST00000597261 POLR3FQ9H1D9 316 aaPredicted RBP18.2■□□□□ 0.5
CHERP-206ENST00000597261 DACT1Q9NYF0 836 aa18.2■□□□□ 0.5
CHERP-206ENST00000597261 LRFN2Q9ULH4 789 aa18.2■□□□□ 0.5
CHERP-206ENST00000597261 SRPRBQ9Y5M8 271 aaKnown RBP18.2■□□□□ 0.5
CHERP-206ENST00000597261 ZNF623O75123 536 aa18.19■□□□□ 0.5
CHERP-206ENST00000597261 FOSL2P15408 326 aa18.19■□□□□ 0.5
CHERP-206ENST00000597261 PHKA2P46019 1235 aa18.19■□□□□ 0.5
CHERP-206ENST00000597261 TMEM119Q4V9L6 283 aa18.19■□□□□ 0.5
CHERP-206ENST00000597261 FAM102BQ5T8I3 360 aa18.19■□□□□ 0.5
CHERP-206ENST00000597261 RINT1Q6NUQ1 792 aa18.19■□□□□ 0.5
CHERP-206ENST00000597261 C1orf186Q6ZWK4 172 aa18.19■□□□□ 0.5
CHERP-206ENST00000597261 CATSPER4Q7RTX7 472 aa18.19■□□□□ 0.5
CHERP-206ENST00000597261 CMTR2Q8IYT2 770 aaKnown RBP18.19■□□□□ 0.5
CHERP-206ENST00000597261 USP28Q96RU2 1077 aa18.19■□□□□ 0.5
CHERP-206ENST00000597261 C17orf80Q9BSJ5 609 aa18.19■□□□□ 0.5
CHERP-206ENST00000597261 NT5C3AQ9H0P0 336 aa18.19■□□□□ 0.5
CHERP-206ENST00000597261 AGPAT5Q9NUQ2 364 aa18.19■□□□□ 0.5
CHERP-206ENST00000597261 FBXO2Q9UK22 296 aaPredicted RBP18.19■□□□□ 0.5
CHERP-206ENST00000597261 PTPRSQ13332 1948 aa18.19■□□□□ 0.5
CHERP-206ENST00000597261 ZSCAN22P10073 491 aaPredicted RBP18.18■□□□□ 0.5
CHERP-206ENST00000597261 BMPR1AP36894 532 aa18.18■□□□□ 0.5
CHERP-206ENST00000597261 UBA7P41226 1012 aa18.18■□□□□ 0.5
CHERP-206ENST00000597261 NASPP49321 788 aaPredicted RBP18.18■□□□□ 0.5
CHERP-206ENST00000597261 MBTD1Q05BQ5 628 aa18.18■□□□□ 0.5
CHERP-206ENST00000597261 BTG3Q14201 252 aaPredicted RBP18.18■□□□□ 0.5
CHERP-206ENST00000597261 EPC2Q52LR7 807 aa18.18■□□□□ 0.5
CHERP-206ENST00000597261 CABP7Q86V35 215 aa18.18■□□□□ 0.5
CHERP-206ENST00000597261 TMEM192Q8IY95 271 aa18.18■□□□□ 0.5
CHERP-206ENST00000597261 SYT2Q8N9I0 419 aaPredicted RBP18.18■□□□□ 0.5
CHERP-206ENST00000597261 SPRYD3Q8NCJ5 442 aa18.18■□□□□ 0.5
CHERP-206ENST00000597261 CCSER1Q9C0I3 900 aa18.18■□□□□ 0.5
CHERP-206ENST00000597261 RNF19AQ9NV58 838 aa18.18■□□□□ 0.5
CHERP-206ENST00000597261 ADGRA3Q8IWK6 1321 aa18.18■□□□□ 0.5
CHERP-206ENST00000597261 C5orf67F2Z3F1 127 aa18.17■□□□□ 0.5
CHERP-206ENST00000597261 RB1P06400 928 aa18.17■□□□□ 0.5
CHERP-206ENST00000597261 SKIP12755 728 aa18.17■□□□□ 0.5
CHERP-206ENST00000597261 MARCKSP29966 332 aaPredicted RBP18.17■□□□□ 0.5
CHERP-206ENST00000597261 AXLP30530 894 aa18.17■□□□□ 0.5
CHERP-206ENST00000597261 GATMP50440 423 aa18.17■□□□□ 0.5
CHERP-206ENST00000597261 SLC12A3P55017 1021 aa18.17■□□□□ 0.5
CHERP-206ENST00000597261 AMHR2Q16671 573 aa18.17■□□□□ 0.5
CHERP-206ENST00000597261 CDCA2Q69YH5 1023 aaPredicted RBP18.17■□□□□ 0.5
CHERP-206ENST00000597261 MRPL10Q7Z7H8 261 aaKnown RBP18.17■□□□□ 0.5
CHERP-206ENST00000597261 BSNDQ8WZ55 320 aa18.17■□□□□ 0.5
CHERP-206ENST00000597261 KIFAP3Q92845 792 aa18.17■□□□□ 0.5
CHERP-206ENST00000597261 CSRNP2Q9H175 543 aa18.17■□□□□ 0.5
CHERP-206ENST00000597261 FZD8Q9H461 694 aa18.17■□□□□ 0.5
CHERP-206ENST00000597261 POLD4Q9HCU8 107 aa18.17■□□□□ 0.5
CHERP-206ENST00000597261 LMCD1Q9NZU5 365 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms