RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 HOXA2O43364 376 aa18.09■□□□□ 0.49
LIM2-202ENST00000596399 CBX2Q14781 532 aaPredicted RBP18.09■□□□□ 0.49
LIM2-202ENST00000596399 INF2Q27J81 1249 aa18.09■□□□□ 0.49
LIM2-202ENST00000596399 XKR3Q5GH77 459 aa18.09■□□□□ 0.49
LIM2-202ENST00000596399 ANKRD54Q6NXT1 300 aa18.09■□□□□ 0.49
LIM2-202ENST00000596399 TMC7Q7Z402 723 aa18.09■□□□□ 0.49
LIM2-202ENST00000596399 ZNF579Q8NAF0 562 aaKnown RBP18.09■□□□□ 0.49
LIM2-202ENST00000596399 MBOAT7Q96N66 472 aa18.09■□□□□ 0.49
LIM2-202ENST00000596399 CDCA3Q99618 268 aaPredicted RBP18.09■□□□□ 0.49
LIM2-202ENST00000596399 GJB4Q9NTQ9 266 aa18.09■□□□□ 0.49
LIM2-202ENST00000596399 SPG21Q9NZD8 308 aa18.09■□□□□ 0.49
LIM2-202ENST00000596399 PUF60Q9UHX1 559 aaKnown RBP18.09■□□□□ 0.49
LIM2-202ENST00000596399 DEXIO95424 95 aa18.08■□□□□ 0.48
LIM2-202ENST00000596399 ZXDAP98168 799 aa18.08■□□□□ 0.48
LIM2-202ENST00000596399 NHLH1Q02575 133 aa18.08■□□□□ 0.48
LIM2-202ENST00000596399 PDE12Q6L8Q7 609 aaKnown RBP18.08■□□□□ 0.48
LIM2-202ENST00000596399 TMEM184AQ6ZMB5 413 aa18.08■□□□□ 0.48
LIM2-202ENST00000596399 TRIM67Q6ZTA4 783 aa18.08■□□□□ 0.48
LIM2-202ENST00000596399 ANO5Q75V66 913 aa18.08■□□□□ 0.48
LIM2-202ENST00000596399 TMEM173Q86WV6 379 aaPredicted RBP18.08■□□□□ 0.48
LIM2-202ENST00000596399 RHPN2Q8IUC4 686 aa18.08■□□□□ 0.48
LIM2-202ENST00000596399 SLC39A11Q8N1S5 342 aa18.08■□□□□ 0.48
LIM2-202ENST00000596399 ZNF274Q96GC6 653 aaPredicted RBP18.08■□□□□ 0.48
LIM2-202ENST00000596399 GCOM2Q9BZD3 368 aaPredicted RBP18.08■□□□□ 0.48
LIM2-202ENST00000596399 SUCLA2Q9P2R7 463 aaPredicted RBP18.08■□□□□ 0.48
LIM2-202ENST00000596399 DDX25Q9UHL0 483 aaKnown RBP18.08■□□□□ 0.48
LIM2-202ENST00000596399 TMEM221A6NGB7 291 aa18.07■□□□□ 0.48
LIM2-202ENST00000596399 M0R296 226 aa18.07■□□□□ 0.48
LIM2-202ENST00000596399 NPEPPSP55786 919 aa18.07■□□□□ 0.48
LIM2-202ENST00000596399 BCAR1P56945 870 aa18.07■□□□□ 0.48
LIM2-202ENST00000596399 KRT17Q04695 432 aa18.07■□□□□ 0.48
LIM2-202ENST00000596399 NONOQ15233 471 aaKnown RBP eCLIP18.07■□□□□ 0.48
LIM2-202ENST00000596399 LETM2Q2VYF4 491 aa18.07■□□□□ 0.48
LIM2-202ENST00000596399 IER5LQ5T953 404 aa18.07■□□□□ 0.48
LIM2-202ENST00000596399 DAGLBQ8NCG7 672 aa18.07■□□□□ 0.48
LIM2-202ENST00000596399 RDM1Q8NG50 284 aa18.07■□□□□ 0.48
LIM2-202ENST00000596399 AUTS2Q8WXX7 1259 aa18.07■□□□□ 0.48
LIM2-202ENST00000596399 MFSD14AQ96MC6 490 aa18.07■□□□□ 0.48
LIM2-202ENST00000596399 NGRNQ9NPE2 291 aaKnown RBP18.07■□□□□ 0.48
LIM2-202ENST00000596399 WRAP73Q9P2S5 460 aaPredicted RBP18.07■□□□□ 0.48
LIM2-202ENST00000596399 C2orf71A6NGG8 1288 aa18.06■□□□□ 0.48
LIM2-202ENST00000596399 MAFO75444 373 aaPredicted RBP18.06■□□□□ 0.48
LIM2-202ENST00000596399 EOMESO95936 686 aa18.06■□□□□ 0.48
LIM2-202ENST00000596399 CA8P35219 290 aa18.06■□□□□ 0.48
LIM2-202ENST00000596399 PPM1AP35813 382 aa18.06■□□□□ 0.48
LIM2-202ENST00000596399 PHKA2P46019 1235 aa18.06■□□□□ 0.48
LIM2-202ENST00000596399 SCRN1Q12765 414 aa18.06■□□□□ 0.48
LIM2-202ENST00000596399 KANK3Q6NY19 840 aa18.06■□□□□ 0.48
LIM2-202ENST00000596399 ZNF710Q8N1W2 664 aa18.06■□□□□ 0.48
LIM2-202ENST00000596399 FEZF2Q8TBJ5 459 aa18.06■□□□□ 0.48
LIM2-202ENST00000596399 OXER1Q8TDS5 423 aa18.06■□□□□ 0.48
LIM2-202ENST00000596399 BCL7CQ8WUZ0 217 aaPredicted RBP18.06■□□□□ 0.48
LIM2-202ENST00000596399 PBXIP1Q96AQ6 731 aa18.06■□□□□ 0.48
LIM2-202ENST00000596399 NLRP4Q96MN2 994 aa18.06■□□□□ 0.48
LIM2-202ENST00000596399 C22orf23Q9BZE7 217 aa18.06■□□□□ 0.48
LIM2-202ENST00000596399 BMP2KQ9NSY1 1161 aaPredicted RBP18.06■□□□□ 0.48
LIM2-202ENST00000596399 PDRG1Q9NUG6 133 aa18.06■□□□□ 0.48
LIM2-202ENST00000596399 DACT1Q9NYF0 836 aa18.06■□□□□ 0.48
LIM2-202ENST00000596399 VAV3Q9UKW4 847 aa18.06■□□□□ 0.48
LIM2-202ENST00000596399 PIN4Q9Y237 131 aaKnown RBP18.06■□□□□ 0.48
LIM2-202ENST00000596399 ZNF318Q5VUA4 2279 aa18.06■□□□□ 0.48
LIM2-202ENST00000596399 B4GALT3O60512 393 aa18.05■□□□□ 0.48
LIM2-202ENST00000596399 ZC3H11AO75152 810 aaKnown RBP eCLIP18.05■□□□□ 0.48
LIM2-202ENST00000596399 WEE2P0C1S8 567 aa18.05■□□□□ 0.48
LIM2-202ENST00000596399 DNM2P50570 870 aa18.05■□□□□ 0.48
LIM2-202ENST00000596399 TWF2Q6IBS0 349 aaKnown RBP18.05■□□□□ 0.48
LIM2-202ENST00000596399 MRPL43Q8N983 215 aaKnown RBP18.05■□□□□ 0.48
LIM2-202ENST00000596399 PHOX2BQ99453 314 aa18.05■□□□□ 0.48
LIM2-202ENST00000596399 PHF20Q9BVI0 1012 aa18.05■□□□□ 0.48
LIM2-202ENST00000596399 TM6SF1Q9BZW5 370 aa18.05■□□□□ 0.48
LIM2-202ENST00000596399 INPP5FQ9Y2H2 1132 aa18.05■□□□□ 0.48
LIM2-202ENST00000596399 HCFC2Q9Y5Z7 792 aa18.05■□□□□ 0.48
LIM2-202ENST00000596399 CLASP2O75122 1294 aaKnown RBP18.04■□□□□ 0.48
LIM2-202ENST00000596399 CXCL14O95715 111 aa18.04■□□□□ 0.48
LIM2-202ENST00000596399 ALDH7A1P49419 539 aaKnown RBP18.04■□□□□ 0.48
LIM2-202ENST00000596399 MRE11P49959 708 aa18.04■□□□□ 0.48
LIM2-202ENST00000596399 AFF1P51825 1210 aaKnown RBP18.04■□□□□ 0.48
LIM2-202ENST00000596399 PSMC5P62195 406 aa18.04■□□□□ 0.48
LIM2-202ENST00000596399 SMC1AQ14683 1233 aaKnown RBP18.04■□□□□ 0.48
LIM2-202ENST00000596399 EARS2Q5JPH6 523 aaKnown RBP18.04■□□□□ 0.48
LIM2-202ENST00000596399 MOXD1Q6UVY6 613 aa18.04■□□□□ 0.48
LIM2-202ENST00000596399 KRT25Q7Z3Z0 450 aa18.04■□□□□ 0.48
LIM2-202ENST00000596399 C12orf76Q8N812 135 aaPredicted RBP18.04■□□□□ 0.48
LIM2-202ENST00000596399 PRSS33Q8NF86 280 aa18.04■□□□□ 0.48
LIM2-202ENST00000596399 SLKQ9H2G2 1235 aaPredicted RBP18.04■□□□□ 0.48
LIM2-202ENST00000596399 MINDY3Q9H8M7 445 aa18.04■□□□□ 0.48
LIM2-202ENST00000596399 IFT122Q9HBG6 1241 aa18.04■□□□□ 0.48
LIM2-202ENST00000596399 CYP26B1Q9NR63 512 aa18.04■□□□□ 0.48
LIM2-202ENST00000596399 CHST12Q9NRB3 414 aa18.04■□□□□ 0.48
LIM2-202ENST00000596399 TSHZ2Q9NRE2 1034 aa18.04■□□□□ 0.48
LIM2-202ENST00000596399 DNAJB4Q9UDY4 337 aa18.04■□□□□ 0.48
LIM2-202ENST00000596399 FAM205CA6NFA0 338 aa18.03■□□□□ 0.48
LIM2-202ENST00000596399 ZBTB39O15060 712 aa18.03■□□□□ 0.48
LIM2-202ENST00000596399 SRGAP2BP0DMP2 458 aa18.03■□□□□ 0.48
LIM2-202ENST00000596399 SFPQP23246 707 aaKnown RBP eCLIP18.03■□□□□ 0.48
LIM2-202ENST00000596399 CATSPER4Q7RTX7 472 aa18.03■□□□□ 0.48
LIM2-202ENST00000596399 VPS52Q8N1B4 723 aa18.03■□□□□ 0.48
LIM2-202ENST00000596399 HAS1Q92839 578 aa18.03■□□□□ 0.48
LIM2-202ENST00000596399 TMEM143Q96AN5 459 aa18.03■□□□□ 0.48
LIM2-202ENST00000596399 MRPL9Q9BYD2 267 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms