RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 CRIPAKQ8N1N5 446 aa16.65■□□□□ 0.26
SCN1B-204ENST00000596348 DEFB123Q8N688 67 aa16.65■□□□□ 0.26
SCN1B-204ENST00000596348 RNF149Q8NC42 400 aa16.65■□□□□ 0.26
SCN1B-204ENST00000596348 LINC00301Q8NCQ3 95 aa16.65■□□□□ 0.26
SCN1B-204ENST00000596348 MCPH1Q8NEM0 835 aa16.65■□□□□ 0.26
SCN1B-204ENST00000596348 TOP1MTQ969P6 601 aa16.65■□□□□ 0.26
SCN1B-204ENST00000596348 EPSTI1Q96J88 318 aa16.65■□□□□ 0.26
SCN1B-204ENST00000596348 ZNF396Q96N95 335 aaPredicted RBP16.65■□□□□ 0.26
SCN1B-204ENST00000596348 ADAM2Q99965 735 aa16.65■□□□□ 0.26
SCN1B-204ENST00000596348 DNM3Q9UQ16 869 aa16.65■□□□□ 0.26
SCN1B-204ENST00000596348 ASAP2O43150 1006 aa16.64■□□□□ 0.25
SCN1B-204ENST00000596348 UPP2O95045 317 aa16.64■□□□□ 0.25
SCN1B-204ENST00000596348 CA3P07451 260 aa16.64■□□□□ 0.25
SCN1B-204ENST00000596348 UBA7P41226 1012 aa16.64■□□□□ 0.25
SCN1B-204ENST00000596348 MXD4Q14582 209 aaPredicted RBP16.64■□□□□ 0.25
SCN1B-204ENST00000596348 KARSQ15046 597 aaKnown RBP16.64■□□□□ 0.25
SCN1B-204ENST00000596348 ODR4Q5SWX8 454 aa16.64■□□□□ 0.25
SCN1B-204ENST00000596348 ZNF697Q5TEC3 545 aa16.64■□□□□ 0.25
SCN1B-204ENST00000596348 SPRED2Q7Z698 418 aa16.64■□□□□ 0.25
SCN1B-204ENST00000596348 BSNDQ8WZ55 320 aa16.64■□□□□ 0.25
SCN1B-204ENST00000596348 CHAMP1Q96JM3 812 aa16.64■□□□□ 0.25
SCN1B-204ENST00000596348 FAM161BQ96MY7 647 aa16.64■□□□□ 0.25
SCN1B-204ENST00000596348 ZBED2Q9BTP6 218 aa16.64■□□□□ 0.25
SCN1B-204ENST00000596348 RUSC1Q9BVN2 902 aa16.64■□□□□ 0.25
SCN1B-204ENST00000596348 NT5C3AQ9H0P0 336 aa16.64■□□□□ 0.25
SCN1B-204ENST00000596348 SEMA6BQ9H3T3 888 aa16.64■□□□□ 0.25
SCN1B-204ENST00000596348 POLD4Q9HCU8 107 aa16.64■□□□□ 0.25
SCN1B-204ENST00000596348 DAXXQ9UER7 740 aaPredicted RBP16.64■□□□□ 0.25
SCN1B-204ENST00000596348 TMEM265A0A087WTH1 108 aa16.63■□□□□ 0.25
SCN1B-204ENST00000596348 C9IYK1 514 aa16.63■□□□□ 0.25
SCN1B-204ENST00000596348 SLC26A4O43511 780 aa16.63■□□□□ 0.25
SCN1B-204ENST00000596348 PLCG1P19174 1290 aa16.63■□□□□ 0.25
SCN1B-204ENST00000596348 PTENP60484 403 aa16.63■□□□□ 0.25
SCN1B-204ENST00000596348 HTRA4P83105 476 aaPredicted RBP16.63■□□□□ 0.25
SCN1B-204ENST00000596348 DNM1Q05193 864 aaKnown RBP16.63■□□□□ 0.25
SCN1B-204ENST00000596348 STK38Q15208 465 aa16.63■□□□□ 0.25
SCN1B-204ENST00000596348 FAM102BQ5T8I3 360 aa16.63■□□□□ 0.25
SCN1B-204ENST00000596348 KRI1Q8N9T8 703 aaKnown RBP16.63■□□□□ 0.25
SCN1B-204ENST00000596348 SYMPKQ92797 1274 aaKnown RBP16.63■□□□□ 0.25
SCN1B-204ENST00000596348 CDK5RAP3Q96JB5 506 aa16.63■□□□□ 0.25
SCN1B-204ENST00000596348 RAD9AQ99638 391 aa16.63■□□□□ 0.25
SCN1B-204ENST00000596348 ZNF576Q9H609 170 aa16.63■□□□□ 0.25
SCN1B-204ENST00000596348 RGS18Q9NS28 235 aa16.63■□□□□ 0.25
SCN1B-204ENST00000596348 MTMR10Q9NXD2 777 aa16.63■□□□□ 0.25
SCN1B-204ENST00000596348 TCHHQ07283 1943 aa16.62■□□□□ 0.25
SCN1B-204ENST00000596348 COL6A3P12111 3177 aa16.62■□□□□ 0.25
SCN1B-204ENST00000596348 DENND3A2RUS2 1198 aa16.62■□□□□ 0.25
SCN1B-204ENST00000596348 SPTLC2O15270 562 aa16.62■□□□□ 0.25
SCN1B-204ENST00000596348 YEATS4O95619 227 aa16.62■□□□□ 0.25
SCN1B-204ENST00000596348 SFPQP23246 707 aaKnown RBP eCLIP16.62■□□□□ 0.25
SCN1B-204ENST00000596348 PHKA2P46019 1235 aa16.62■□□□□ 0.25
SCN1B-204ENST00000596348 SLC12A3P55017 1021 aa16.62■□□□□ 0.25
SCN1B-204ENST00000596348 TAP1Q03518 808 aa16.62■□□□□ 0.25
SCN1B-204ENST00000596348 RINT1Q6NUQ1 792 aa16.62■□□□□ 0.25
SCN1B-204ENST00000596348 C1orf186Q6ZWK4 172 aa16.62■□□□□ 0.25
SCN1B-204ENST00000596348 SRGAP1Q7Z6B7 1085 aa16.62■□□□□ 0.25
SCN1B-204ENST00000596348 IFNLR1Q8IU57 520 aaPredicted RBP16.62■□□□□ 0.25
SCN1B-204ENST00000596348 DAW1Q8N136 415 aa16.62■□□□□ 0.25
SCN1B-204ENST00000596348 GUCD1Q96NT3 240 aa16.62■□□□□ 0.25
SCN1B-204ENST00000596348 CCSER1Q9C0I3 900 aa16.62■□□□□ 0.25
SCN1B-204ENST00000596348 SLC28A3Q9HAS3 691 aa16.62■□□□□ 0.25
SCN1B-204ENST00000596348 RC3H2Q9HBD1 1191 aaKnown RBP16.62■□□□□ 0.25
SCN1B-204ENST00000596348 BLOC1S4Q9NUP1 217 aa16.62■□□□□ 0.25
SCN1B-204ENST00000596348 MYH11P35749 1972 aa16.61■□□□□ 0.25
SCN1B-204ENST00000596348 PLA2G4BP0C869 781 aa16.61■□□□□ 0.25
SCN1B-204ENST00000596348 IBSPP21815 317 aaPredicted RBP16.61■□□□□ 0.25
SCN1B-204ENST00000596348 DDIT3P35638 169 aa16.61■□□□□ 0.25
SCN1B-204ENST00000596348 SARSP49591 514 aaKnown RBP16.61■□□□□ 0.25
SCN1B-204ENST00000596348 POU5F1BQ06416 359 aa16.61■□□□□ 0.25
SCN1B-204ENST00000596348 MAPK7Q13164 816 aa16.61■□□□□ 0.25
SCN1B-204ENST00000596348 TFDP1Q14186 410 aa16.61■□□□□ 0.25
SCN1B-204ENST00000596348 PPP2R2DQ66LE6 453 aa16.61■□□□□ 0.25
SCN1B-204ENST00000596348 FAM43BQ6ZT52 329 aaPredicted RBP16.61■□□□□ 0.25
SCN1B-204ENST00000596348 SLC24A5Q71RS6 500 aa16.61■□□□□ 0.25
SCN1B-204ENST00000596348 CATSPER4Q7RTX7 472 aa16.61■□□□□ 0.25
SCN1B-204ENST00000596348 NPAS4Q8IUM7 802 aa16.61■□□□□ 0.25
SCN1B-204ENST00000596348 KCTD17Q8N5Z5 321 aa16.61■□□□□ 0.25
SCN1B-204ENST00000596348 SYT2Q8N9I0 419 aaPredicted RBP16.61■□□□□ 0.25
SCN1B-204ENST00000596348 SP7Q8TDD2 431 aaPredicted RBP16.61■□□□□ 0.25
SCN1B-204ENST00000596348 CALML4Q96GE6 196 aa16.61■□□□□ 0.25
SCN1B-204ENST00000596348 INO80BQ9C086 356 aaPredicted RBP16.61■□□□□ 0.25
SCN1B-204ENST00000596348 INSL6Q9Y581 213 aa16.61■□□□□ 0.25
SCN1B-204ENST00000596348 A0A087X0B3 334 aa16.6■□□□□ 0.25
SCN1B-204ENST00000596348 LRRIQ4A6NIV6 560 aa16.6■□□□□ 0.25
SCN1B-204ENST00000596348 PPP6R2O75170 966 aa16.6■□□□□ 0.25
SCN1B-204ENST00000596348 SSBP05455 408 aaKnown RBP eCLIP16.6■□□□□ 0.25
SCN1B-204ENST00000596348 HOXA11P31270 313 aaPredicted RBP16.6■□□□□ 0.25
SCN1B-204ENST00000596348 GATMP50440 423 aa16.6■□□□□ 0.25
SCN1B-204ENST00000596348 FAM189BP81408 668 aa16.6■□□□□ 0.25
SCN1B-204ENST00000596348 MBTD1Q05BQ5 628 aa16.6■□□□□ 0.25
SCN1B-204ENST00000596348 GRIN2CQ14957 1233 aa16.6■□□□□ 0.25
SCN1B-204ENST00000596348 AMHR2Q16671 573 aa16.6■□□□□ 0.25
SCN1B-204ENST00000596348 ATL3Q6DD88 541 aa16.6■□□□□ 0.25
SCN1B-204ENST00000596348 YME1L1Q96TA2 773 aa16.6■□□□□ 0.25
SCN1B-204ENST00000596348 NFKBIZQ9BYH8 718 aa16.6■□□□□ 0.25
SCN1B-204ENST00000596348 C1orf112Q9NSG2 853 aa16.6■□□□□ 0.25
SCN1B-204ENST00000596348 AGPAT5Q9NUQ2 364 aa16.6■□□□□ 0.25
SCN1B-204ENST00000596348 PIN4Q9Y237 131 aaKnown RBP16.6■□□□□ 0.25
SCN1B-204ENST00000596348 ADGRA3Q8IWK6 1321 aa16.6■□□□□ 0.25
SCN1B-204ENST00000596348 FNDC1Q4ZHG4 1894 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms