RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 SPOUT1Q5T280 376 aaKnown RBP28.39■■■□□ 2.14
ZNF558-203ENST00000595786 POF1BQ8WVV4 589 aa28.39■■■□□ 2.14
ZNF558-203ENST00000595786 TCP11Q8WWU5 503 aa28.39■■■□□ 2.14
ZNF558-203ENST00000595786 C8orf76Q96K31 380 aa28.39■■■□□ 2.14
ZNF558-203ENST00000595786 TTC12Q9H892 705 aaPredicted RBP28.39■■■□□ 2.14
ZNF558-203ENST00000595786 SKIP12755 728 aa28.38■■■□□ 2.13
ZNF558-203ENST00000595786 LAG3P18627 525 aa28.38■■■□□ 2.13
ZNF558-203ENST00000595786 ORC2Q13416 577 aaPredicted RBP28.38■■■□□ 2.13
ZNF558-203ENST00000595786 ZNF598Q86UK7 904 aaKnown RBP28.38■■■□□ 2.13
ZNF558-203ENST00000595786 ABI1Q8IZP0 508 aa28.38■■■□□ 2.13
ZNF558-203ENST00000595786 PSPC1Q8WXF1 523 aaKnown RBP28.38■■■□□ 2.13
ZNF558-203ENST00000595786 NECAB3Q96P71 396 aaPredicted RBP28.38■■■□□ 2.13
ZNF558-203ENST00000595786 CASD1Q96PB1 797 aa28.38■■■□□ 2.13
ZNF558-203ENST00000595786 EIF2AK1Q9BQI3 630 aaKnown RBP28.38■■■□□ 2.13
ZNF558-203ENST00000595786 FOXP1Q9H334 677 aaPredicted RBP28.38■■■□□ 2.13
ZNF558-203ENST00000595786 CWH43Q9H720 699 aa28.38■■■□□ 2.13
ZNF558-203ENST00000595786 RNF19AQ9NV58 838 aa28.38■■■□□ 2.13
ZNF558-203ENST00000595786 COL4A3BPQ9Y5P4 624 aa28.38■■■□□ 2.13
ZNF558-203ENST00000595786 MUC3AQ02505 3323 aa28.37■■■□□ 2.13
ZNF558-203ENST00000595786 FGFR4P22455 802 aa28.37■■■□□ 2.13
ZNF558-203ENST00000595786 FOSBP53539 338 aa28.37■■■□□ 2.13
ZNF558-203ENST00000595786 HYAL1Q12794 435 aa28.37■■■□□ 2.13
ZNF558-203ENST00000595786 CTTNQ14247 550 aaKnown RBP28.37■■■□□ 2.13
ZNF558-203ENST00000595786 TPH2Q8IWU9 490 aa28.37■■■□□ 2.13
ZNF558-203ENST00000595786 ZNF579Q8NAF0 562 aaKnown RBP28.37■■■□□ 2.13
ZNF558-203ENST00000595786 FBXO18Q8NFZ0 1043 aa28.37■■■□□ 2.13
ZNF558-203ENST00000595786 ANKEF1Q9NU02 776 aa28.37■■■□□ 2.13
ZNF558-203ENST00000595786 FAM50BQ9Y247 325 aa28.37■■■□□ 2.13
ZNF558-203ENST00000595786 ATG2AQ2TAZ0 1938 aa28.36■■■□□ 2.13
ZNF558-203ENST00000595786 CSDE1O75534 798 aaKnown RBP28.36■■■□□ 2.13
ZNF558-203ENST00000595786 DNAJB1P25685 340 aa28.36■■■□□ 2.13
ZNF558-203ENST00000595786 CYP4A11Q02928 519 aa28.36■■■□□ 2.13
ZNF558-203ENST00000595786 XKR9Q5GH70 373 aa28.36■■■□□ 2.13
ZNF558-203ENST00000595786 PDE12Q6L8Q7 609 aaKnown RBP28.36■■■□□ 2.13
ZNF558-203ENST00000595786 SRGAP1Q7Z6B7 1085 aa28.36■■■□□ 2.13
ZNF558-203ENST00000595786 COLGALT1Q8NBJ5 622 aa28.36■■■□□ 2.13
ZNF558-203ENST00000595786 PRPF31Q8WWY3 499 aaKnown RBP28.36■■■□□ 2.13
ZNF558-203ENST00000595786 NLRP4Q96MN2 994 aa28.36■■■□□ 2.13
ZNF558-203ENST00000595786 IFT122Q9HBG6 1241 aa28.36■■■□□ 2.13
ZNF558-203ENST00000595786 CLDND1Q9NY35 253 aa28.36■■■□□ 2.13
ZNF558-203ENST00000595786 GRXCR2A6NFK2 248 aa28.35■■■□□ 2.13
ZNF558-203ENST00000595786 XRCC6P12956 609 aaKnown RBP eCLIP28.35■■■□□ 2.13
ZNF558-203ENST00000595786 TXKP42681 527 aa28.35■■■□□ 2.13
ZNF558-203ENST00000595786 PTCRAQ6ISU1 281 aaPredicted RBP28.35■■■□□ 2.13
ZNF558-203ENST00000595786 KSR1Q8IVT5 923 aa28.35■■■□□ 2.13
ZNF558-203ENST00000595786 LRRC43Q8N309 656 aa28.35■■■□□ 2.13
ZNF558-203ENST00000595786 LZTS1Q9Y250 596 aa28.35■■■□□ 2.13
ZNF558-203ENST00000595786 WNT7AO00755 349 aa28.34■■■□□ 2.13
ZNF558-203ENST00000595786 ZNF623O75123 536 aa28.34■■■□□ 2.13
ZNF558-203ENST00000595786 FGF18O76093 207 aa28.34■■■□□ 2.13
ZNF558-203ENST00000595786 PHKA2P46019 1235 aa28.34■■■□□ 2.13
ZNF558-203ENST00000595786 PLCB3Q01970 1234 aa28.34■■■□□ 2.13
ZNF558-203ENST00000595786 GUCY1B3Q02153 619 aa28.34■■■□□ 2.13
ZNF558-203ENST00000595786 EMC2Q15006 297 aa28.34■■■□□ 2.13
ZNF558-203ENST00000595786 CATSPER4Q7RTX7 472 aa28.34■■■□□ 2.13
ZNF558-203ENST00000595786 FAM184AQ8NB25 1140 aa28.34■■■□□ 2.13
ZNF558-203ENST00000595786 TMEM143Q96AN5 459 aa28.34■■■□□ 2.13
ZNF558-203ENST00000595786 CARNS1A5YM72 827 aa28.33■■■□□ 2.13
ZNF558-203ENST00000595786 PPM1AP35813 382 aa28.33■■■□□ 2.13
ZNF558-203ENST00000595786 LTBRP36941 435 aa28.33■■■□□ 2.13
ZNF558-203ENST00000595786 RAB27AP51159 221 aa28.33■■■□□ 2.13
ZNF558-203ENST00000595786 LAMTOR4Q0VGL1 99 aa28.33■■■□□ 2.13
ZNF558-203ENST00000595786 ADAM15Q13444 863 aa28.33■■■□□ 2.13
ZNF558-203ENST00000595786 MXD4Q14582 209 aaPredicted RBP28.33■■■□□ 2.13
ZNF558-203ENST00000595786 RABEP1Q15276 862 aa28.33■■■□□ 2.13
ZNF558-203ENST00000595786 PCBP1Q15365 356 aaKnown RBP eCLIP28.33■■■□□ 2.13
ZNF558-203ENST00000595786 LRRC55Q6ZSA7 311 aa28.33■■■□□ 2.13
ZNF558-203ENST00000595786 THNSL1Q8IYQ7 743 aa28.33■■■□□ 2.13
ZNF558-203ENST00000595786 MTRQ99707 1265 aa28.33■■■□□ 2.13
ZNF558-203ENST00000595786 MRPL9Q9BYD2 267 aaKnown RBP28.33■■■□□ 2.13
ZNF558-203ENST00000595786 FSD2A1L4K1 749 aa28.32■■■□□ 2.12
ZNF558-203ENST00000595786 H3BQ06 376 aaPredicted RBP28.32■■■□□ 2.12
ZNF558-203ENST00000595786 DGAT1O75907 488 aa28.32■■■□□ 2.12
ZNF558-203ENST00000595786 ATF7P17544 494 aaPredicted RBP28.32■■■□□ 2.12
ZNF558-203ENST00000595786 POU5F1BQ06416 359 aa28.32■■■□□ 2.12
ZNF558-203ENST00000595786 CLLU1OSQ5K130 101 aa28.32■■■□□ 2.12
ZNF558-203ENST00000595786 TWF2Q6IBS0 349 aaKnown RBP28.32■■■□□ 2.12
ZNF558-203ENST00000595786 EP400NLQ6ZTU2 488 aa28.32■■■□□ 2.12
ZNF558-203ENST00000595786 FERMT3Q86UX7 667 aa28.32■■■□□ 2.12
ZNF558-203ENST00000595786 FAM178BQ8IXR5 827 aa28.32■■■□□ 2.12
ZNF558-203ENST00000595786 RNF169Q8NCN4 708 aa28.32■■■□□ 2.12
ZNF558-203ENST00000595786 TMEM60Q9H2L4 133 aa28.32■■■□□ 2.12
ZNF558-203ENST00000595786 TLR9Q9NR96 1032 aa28.32■■■□□ 2.12
ZNF558-203ENST00000595786 PUF60Q9UHX1 559 aaKnown RBP28.32■■■□□ 2.12
ZNF558-203ENST00000595786 PIN4Q9Y237 131 aaKnown RBP28.32■■■□□ 2.12
ZNF558-203ENST00000595786 ZBTB39O15060 712 aa28.31■■■□□ 2.12
ZNF558-203ENST00000595786 SRGAP2CP0DJJ0 459 aa28.31■■■□□ 2.12
ZNF558-203ENST00000595786 MCM7P33993 719 aa28.31■■■□□ 2.12
ZNF558-203ENST00000595786 IRS1P35568 1242 aa28.31■■■□□ 2.12
ZNF558-203ENST00000595786 TRAPPC10P48553 1259 aa28.31■■■□□ 2.12
ZNF558-203ENST00000595786 KCNT2Q6UVM3 1135 aa28.31■■■□□ 2.12
ZNF558-203ENST00000595786 EFHBQ8N7U6 833 aa28.31■■■□□ 2.12
ZNF558-203ENST00000595786 ZNF558Q96NG5 402 aa28.31■■■□□ 2.12
ZNF558-203ENST00000595786 AGPAT5Q9NUQ2 364 aa28.31■■■□□ 2.12
ZNF558-203ENST00000595786 PLXNA4Q9HCM2 1894 aa28.3■■■□□ 2.12
ZNF558-203ENST00000595786 MRPS27Q92552 414 aaKnown RBP28.3■■■□□ 2.12
ZNF558-203ENST00000595786 IGFLR1Q9H665 355 aa28.3■■■□□ 2.12
ZNF558-203ENST00000595786 TUFT1Q9NNX1 390 aa28.3■■■□□ 2.12
ZNF558-203ENST00000595786 FAM105AQ9NUU6 356 aa28.3■■■□□ 2.12
ZNF558-203ENST00000595786 HCSTQ9UBK5 93 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms