RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 STMN4Q9H169 189 aaPredicted RBP14.34□□□□□ -0.11
VRK3-209ENST00000594948 DMAC2Q9NW81 257 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 POLLQ9UGP5 575 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 PPP1R9AQ9ULJ8 1098 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 ATP8A1Q9Y2Q0 1164 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 RSPH10B2B2RC85 870 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 F8W031 263 aaPredicted RBP14.34□□□□□ -0.11
VRK3-209ENST00000594948 PODXLO00592 558 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 KIAA0391O15091 583 aaKnown RBP14.34□□□□□ -0.11
VRK3-209ENST00000594948 AGTP01019 485 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 RSPH10BP0C881 870 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 ADRA2BP18089 450 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 TNFAIP3P21580 790 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 ADCY2Q08462 1091 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 MAPK7Q13164 816 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 NEDD9Q14511 834 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 NBPF9Q3BBW0 867 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 C6orf118Q5T5N4 469 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 DENND2CQ68D51 928 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 GJB7Q6PEY0 223 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 DNAAF5Q86Y56 855 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 JAMLQ86YT9 394 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 GLYCTKQ8IVS8 523 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 CCDC197Q8NCU1 140 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 CRAMP1Q96RY5 1269 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 RUSC1Q9BVN2 902 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 GPR88Q9GZN0 384 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 CXorf56Q9H5V9 222 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 OSGEPQ9NPF4 335 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 USP40Q9NVE5 1235 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 PCYOX1Q9UHG3 505 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 PCDHB13Q9Y5F0 798 aa14.34□□□□□ -0.11
VRK3-209ENST00000594948 CCT8L1PA6NM43 557 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 DCDC2CA8MYV0 355 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 MEIS1O00470 390 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 CLIC2O15247 247 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 CAND2O75155 1236 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 FAM13AO94988 1023 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 VCAM1P19320 739 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 PTGIRP43119 386 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 SLFN13Q68D06 897 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 RINT1Q6NUQ1 792 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 HHIPL2Q6UWX4 724 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 ZDHHC24Q6UX98 284 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 PIGWQ7Z7B1 504 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 AMIGO3Q86WK7 504 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 SLC9A9Q8IVB4 645 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 ANKS4BQ8N8V4 417 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 PROCA1Q8NCQ7 364 aaPredicted RBP14.33□□□□□ -0.12
VRK3-209ENST00000594948 HVCN1Q96D96 273 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 EIF2AK1Q9BQI3 630 aaKnown RBP14.33□□□□□ -0.12
VRK3-209ENST00000594948 INTS2Q9H0H0 1204 aaKnown RBP14.33□□□□□ -0.12
VRK3-209ENST00000594948 BHMT2Q9H2M3 363 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 APEX2Q9UBZ4 518 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 THSD7AQ9UPZ6 1657 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 IGSF9BQ9UPX0 1349 aa14.33□□□□□ -0.12
VRK3-209ENST00000594948 SPDYE3A6NKU9 549 aa14.32□□□□□ -0.12
VRK3-209ENST00000594948 MSH4O15457 936 aa14.32□□□□□ -0.12
VRK3-209ENST00000594948 PPIP5K2O43314 1243 aa14.32□□□□□ -0.12
VRK3-209ENST00000594948 ALAS1P13196 640 aa14.32□□□□□ -0.12
VRK3-209ENST00000594948 CTNNA2P26232 953 aa14.32□□□□□ -0.12
VRK3-209ENST00000594948 SLC8A1P32418 973 aa14.32□□□□□ -0.12
VRK3-209ENST00000594948 GTF2IP78347 998 aa14.32□□□□□ -0.12
VRK3-209ENST00000594948 PTPROQ16827 1216 aa14.32□□□□□ -0.12
VRK3-209ENST00000594948 TNFAIP8L3Q5GJ75 292 aa14.32□□□□□ -0.12
VRK3-209ENST00000594948 UBL4BQ8N7F7 174 aa14.32□□□□□ -0.12
VRK3-209ENST00000594948 ATXN2LQ8WWM7 1075 aaKnown RBP14.32□□□□□ -0.12
VRK3-209ENST00000594948 RPS6KC1Q96S38 1066 aa14.32□□□□□ -0.12
VRK3-209ENST00000594948 JPH2Q9BR39 696 aaPredicted RBP14.32□□□□□ -0.12
VRK3-209ENST00000594948 CD248Q9HCU0 757 aa14.32□□□□□ -0.12
VRK3-209ENST00000594948 KCND2Q9NZV8 630 aa14.32□□□□□ -0.12
VRK3-209ENST00000594948 MTRF1LQ9UGC7 380 aaKnown RBP14.32□□□□□ -0.12
VRK3-209ENST00000594948 MCM8Q9UJA3 840 aa14.32□□□□□ -0.12
VRK3-209ENST00000594948 PNMA2Q9UL42 364 aa14.32□□□□□ -0.12
VRK3-209ENST00000594948 FAM86B1E9PN63 330 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 MPHOSPH10O00566 681 aaKnown RBP14.31□□□□□ -0.12
VRK3-209ENST00000594948 MGRN1O60291 552 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 CTNND1O60716 968 aaKnown RBP14.31□□□□□ -0.12
VRK3-209ENST00000594948 MTA2O94776 668 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 FAM86B2P0C5J1 330 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 ZNF131P52739 623 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 SLMAPQ14BN4 828 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 C1orf186Q6ZWK4 172 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 HS2ST1Q7LGA3 356 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 FBXO11Q86XK2 927 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 P2RX7Q99572 595 aaKnown RBP14.31□□□□□ -0.12
VRK3-209ENST00000594948 NSRP1Q9H0G5 558 aaKnown RBP14.31□□□□□ -0.12
VRK3-209ENST00000594948 ERVK-5Q9HDB9 667 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 GRHL1Q9NZI5 618 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 NR2E1Q9Y466 385 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 PHF20L1A8MW92 1017 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 PIK3CDO00329 1044 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 RGS16O15492 202 aaPredicted RBP14.31□□□□□ -0.12
VRK3-209ENST00000594948 CHN1P15882 459 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 MYL7Q01449 175 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 CYP1B1Q16678 543 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 FAM98CQ17RN3 349 aaKnown RBP14.31□□□□□ -0.12
VRK3-209ENST00000594948 SPRED3Q2MJR0 410 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 GMCL1P1Q8NEA9 526 aa14.31□□□□□ -0.12
VRK3-209ENST00000594948 TMEM174Q8WUU8 243 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms