RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 DHX33Q9H6R0 707 aaKnown RBP26.26■■□□□ 1.79
LSM4-204ENST00000594828 CWH43Q9H720 699 aa26.26■■□□□ 1.79
LSM4-204ENST00000594828 RNF19AQ9NV58 838 aa26.26■■□□□ 1.79
LSM4-204ENST00000594828 HCSTQ9UBK5 93 aa26.26■■□□□ 1.79
LSM4-204ENST00000594828 GRXCR2A6NFK2 248 aa26.25■■□□□ 1.79
LSM4-204ENST00000594828 NEMFO60524 1076 aa26.25■■□□□ 1.79
LSM4-204ENST00000594828 SLITRK3O94933 977 aa26.25■■□□□ 1.79
LSM4-204ENST00000594828 EOMESO95936 686 aa26.25■■□□□ 1.79
LSM4-204ENST00000594828 IRS1P35568 1242 aa26.25■■□□□ 1.79
LSM4-204ENST00000594828 LTBRP36941 435 aa26.25■■□□□ 1.79
LSM4-204ENST00000594828 RFC5P40937 340 aa26.25■■□□□ 1.79
LSM4-204ENST00000594828 GUCY1B3Q02153 619 aa26.25■■□□□ 1.79
LSM4-204ENST00000594828 UBE3AQ05086 875 aa26.25■■□□□ 1.79
LSM4-204ENST00000594828 CSPP1Q1MSJ5 1256 aa26.25■■□□□ 1.79
LSM4-204ENST00000594828 XKR9Q5GH70 373 aa26.25■■□□□ 1.79
LSM4-204ENST00000594828 THNSL1Q8IYQ7 743 aa26.25■■□□□ 1.79
LSM4-204ENST00000594828 COLGALT1Q8NBJ5 622 aa26.25■■□□□ 1.79
LSM4-204ENST00000594828 ZSCAN31Q96LW9 406 aaPredicted RBP26.25■■□□□ 1.79
LSM4-204ENST00000594828 TTC12Q9H892 705 aaPredicted RBP26.25■■□□□ 1.79
LSM4-204ENST00000594828 COL4A3BPQ9Y5P4 624 aa26.25■■□□□ 1.79
LSM4-204ENST00000594828 WNT7AO00755 349 aa26.24■■□□□ 1.79
LSM4-204ENST00000594828 FGF18O76093 207 aa26.24■■□□□ 1.79
LSM4-204ENST00000594828 IL9P15248 144 aa26.24■■□□□ 1.79
LSM4-204ENST00000594828 LAG3P18627 525 aa26.24■■□□□ 1.79
LSM4-204ENST00000594828 GTF2F1P35269 517 aaKnown RBP eCLIP26.24■■□□□ 1.79
LSM4-204ENST00000594828 TXKP42681 527 aa26.24■■□□□ 1.79
LSM4-204ENST00000594828 LRRC55Q6ZSA7 311 aa26.24■■□□□ 1.79
LSM4-204ENST00000594828 PRPF31Q8WWY3 499 aaKnown RBP26.24■■□□□ 1.79
LSM4-204ENST00000594828 TMEM143Q96AN5 459 aa26.24■■□□□ 1.79
LSM4-204ENST00000594828 C8orf76Q96K31 380 aa26.24■■□□□ 1.79
LSM4-204ENST00000594828 KIF2CQ99661 725 aa26.24■■□□□ 1.79
LSM4-204ENST00000594828 EIF2AK1Q9BQI3 630 aaKnown RBP26.24■■□□□ 1.79
LSM4-204ENST00000594828 ATG2AQ2TAZ0 1938 aa26.24■■□□□ 1.79
LSM4-204ENST00000594828 BRWD1Q9NSI6 2320 aa26.23■■□□□ 1.79
LSM4-204ENST00000594828 ZBTB39O15060 712 aa26.23■■□□□ 1.79
LSM4-204ENST00000594828 CATSPER4Q7RTX7 472 aa26.23■■□□□ 1.79
LSM4-204ENST00000594828 ZNF598Q86UK7 904 aaKnown RBP26.23■■□□□ 1.79
LSM4-204ENST00000594828 FAM178BQ8IXR5 827 aa26.23■■□□□ 1.79
LSM4-204ENST00000594828 MICAL1Q8TDZ2 1067 aa26.23■■□□□ 1.79
LSM4-204ENST00000594828 PSPC1Q8WXF1 523 aaKnown RBP26.23■■□□□ 1.79
LSM4-204ENST00000594828 MTMR9Q96QG7 549 aa26.23■■□□□ 1.79
LSM4-204ENST00000594828 HSD17B14Q9BPX1 270 aa26.23■■□□□ 1.79
LSM4-204ENST00000594828 IFT122Q9HBG6 1241 aa26.23■■□□□ 1.79
LSM4-204ENST00000594828 MYO7AQ13402 2215 aa26.23■■□□□ 1.79
LSM4-204ENST00000594828 GAS2O43903 313 aaKnown RBP26.22■■□□□ 1.79
LSM4-204ENST00000594828 ATP2B1P20020 1258 aa26.22■■□□□ 1.79
LSM4-204ENST00000594828 CLLU1OSQ5K130 101 aa26.22■■□□□ 1.79
LSM4-204ENST00000594828 TWF2Q6IBS0 349 aaKnown RBP26.22■■□□□ 1.79
LSM4-204ENST00000594828 ADGRD2Q7Z7M1 963 aa26.22■■□□□ 1.79
LSM4-204ENST00000594828 LRRC43Q8N309 656 aa26.22■■□□□ 1.79
LSM4-204ENST00000594828 TCP11Q8WWU5 503 aa26.22■■□□□ 1.79
LSM4-204ENST00000594828 TRAIPQ9BWF2 469 aa26.22■■□□□ 1.79
LSM4-204ENST00000594828 SH2B1Q9NRF2 756 aaPredicted RBP26.22■■□□□ 1.79
LSM4-204ENST00000594828 BMP2KQ9NSY1 1161 aaPredicted RBP26.22■■□□□ 1.79
LSM4-204ENST00000594828 PIN4Q9Y237 131 aaKnown RBP26.22■■□□□ 1.79
LSM4-204ENST00000594828 FAM50BQ9Y247 325 aa26.22■■□□□ 1.79
LSM4-204ENST00000594828 MUC3AQ02505 3323 aa26.22■■□□□ 1.79
LSM4-204ENST00000594828 SRGAP2CP0DJJ0 459 aa26.21■■□□□ 1.79
LSM4-204ENST00000594828 PHKA2P46019 1235 aa26.21■■□□□ 1.79
LSM4-204ENST00000594828 HMGN5P82970 282 aaKnown RBP26.21■■□□□ 1.79
LSM4-204ENST00000594828 DLX2Q07687 328 aaPredicted RBP26.21■■□□□ 1.79
LSM4-204ENST00000594828 ADAM15Q13444 863 aa26.21■■□□□ 1.79
LSM4-204ENST00000594828 EMC2Q15006 297 aa26.21■■□□□ 1.79
LSM4-204ENST00000594828 HELQQ8TDG4 1101 aa26.21■■□□□ 1.79
LSM4-204ENST00000594828 TLR9Q9NR96 1032 aa26.21■■□□□ 1.79
LSM4-204ENST00000594828 LINC01565O15544 149 aa26.2■■□□□ 1.78
LSM4-204ENST00000594828 ASAP2O43150 1006 aa26.2■■□□□ 1.78
LSM4-204ENST00000594828 LYPLA2O95372 231 aa26.2■■□□□ 1.78
LSM4-204ENST00000594828 SKIP12755 728 aa26.2■■□□□ 1.78
LSM4-204ENST00000594828 ATF7P17544 494 aaPredicted RBP26.2■■□□□ 1.78
LSM4-204ENST00000594828 MCM7P33993 719 aa26.2■■□□□ 1.78
LSM4-204ENST00000594828 LAMTOR4Q0VGL1 99 aa26.2■■□□□ 1.78
LSM4-204ENST00000594828 KCNT2Q6UVM3 1135 aa26.2■■□□□ 1.78
LSM4-204ENST00000594828 SRGAP1Q7Z6B7 1085 aa26.2■■□□□ 1.78
LSM4-204ENST00000594828 RBM23Q86U06 439 aaKnown RBP26.2■■□□□ 1.78
LSM4-204ENST00000594828 PLXNA4Q9HCM2 1894 aa26.19■■□□□ 1.78
LSM4-204ENST00000594828 NRIP1P48552 1158 aa26.19■■□□□ 1.78
LSM4-204ENST00000594828 PLCB3Q01970 1234 aa26.19■■□□□ 1.78
LSM4-204ENST00000594828 FERMT3Q86UX7 667 aa26.19■■□□□ 1.78
LSM4-204ENST00000594828 GJD3Q8N144 294 aa26.19■■□□□ 1.78
LSM4-204ENST00000594828 FAM184AQ8NB25 1140 aa26.19■■□□□ 1.78
LSM4-204ENST00000594828 ZNF558Q96NG5 402 aa26.19■■□□□ 1.78
LSM4-204ENST00000594828 MTRQ99707 1265 aa26.19■■□□□ 1.78
LSM4-204ENST00000594828 TMEM60Q9H2L4 133 aa26.19■■□□□ 1.78
LSM4-204ENST00000594828 FOXP1Q9H334 677 aaPredicted RBP26.19■■□□□ 1.78
LSM4-204ENST00000594828 TLE6Q9H808 572 aa26.19■■□□□ 1.78
LSM4-204ENST00000594828 CD320Q9NPF0 282 aa26.19■■□□□ 1.78
LSM4-204ENST00000594828 ANKEF1Q9NU02 776 aa26.19■■□□□ 1.78
LSM4-204ENST00000594828 PUF60Q9UHX1 559 aaKnown RBP26.19■■□□□ 1.78
LSM4-204ENST00000594828 PCDHGC5Q9Y5F6 944 aa26.19■■□□□ 1.78
LSM4-204ENST00000594828 TBX10O75333 385 aa26.18■■□□□ 1.78
LSM4-204ENST00000594828 ERVFC1P60507 584 aa26.18■■□□□ 1.78
LSM4-204ENST00000594828 CLUL1Q15846 466 aa26.18■■□□□ 1.78
LSM4-204ENST00000594828 PDE12Q6L8Q7 609 aaKnown RBP26.18■■□□□ 1.78
LSM4-204ENST00000594828 EFHBQ8N7U6 833 aa26.18■■□□□ 1.78
LSM4-204ENST00000594828 FBXO18Q8NFZ0 1043 aa26.18■■□□□ 1.78
LSM4-204ENST00000594828 MRPS27Q92552 414 aaKnown RBP26.18■■□□□ 1.78
LSM4-204ENST00000594828 MRPL9Q9BYD2 267 aaKnown RBP26.18■■□□□ 1.78
LSM4-204ENST00000594828 FAM105AQ9NUU6 356 aa26.18■■□□□ 1.78
LSM4-204ENST00000594828 LZTS1Q9Y250 596 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms