RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 PKN3Q6P5Z2 889 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 SPATA31D4Q6ZUB0 917 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 SLCO6A1Q86UG4 719 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 TRIM50Q86XT4 487 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 STK11IPQ8N1F8 1099 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 SPEM1Q8N4L4 309 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 CMASQ8NFW8 434 aaPredicted RBP3.64□□□□□ -1.83
VRK3-204ENST00000593912 OR2I1PQ8NGU4 316 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 DNAJB3Q8WWF6 145 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 POM121Q96HA1 1249 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 ZC3H10Q96K80 434 aaKnown RBP3.64□□□□□ -1.83
VRK3-204ENST00000593912 CCDC17Q96LX7 622 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 SPATA33Q96N06 139 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 CASD1Q96PB1 797 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 PSMG3-AS1Q96PY0 264 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 PHF20Q9BVI0 1012 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 VN1R3Q9BXE9 311 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 ADAMTS10Q9H324 1103 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 TUT1Q9H6E5 874 aaKnown RBP3.64□□□□□ -1.83
VRK3-204ENST00000593912 PIDD1Q9HB75 910 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 DCP1AQ9NPI6 582 aaPredicted RBP3.64□□□□□ -1.83
VRK3-204ENST00000593912 TCP11L1Q9NUJ3 509 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 POLR3BQ9NW08 1133 aaPredicted RBP3.64□□□□□ -1.83
VRK3-204ENST00000593912 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.64□□□□□ -1.83
VRK3-204ENST00000593912 CLIP2Q9UDT6 1046 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 MBD1Q9UIS9 605 aaPredicted RBP3.64□□□□□ -1.83
VRK3-204ENST00000593912 MTCL1Q9Y4B5 1905 aaKnown RBP3.64□□□□□ -1.83
VRK3-204ENST00000593912 PI4KAP42356 2102 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 NID2Q14112 1375 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 TNRC6BQ9UPQ9 1833 aaKnown RBP3.63□□□□□ -1.83
VRK3-204ENST00000593912 HIVEP1P15822 2718 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 LOC102724159A0A0B4J2E5 919 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 PRKAB2O43741 272 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 DIAPH2O60879 1101 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 PAPSS2O95340 614 aaPredicted RBP3.63□□□□□ -1.83
VRK3-204ENST00000593912 LGALS2P05162 132 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 BMP3P12645 472 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 FSHRP23945 695 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 GRNP28799 593 aaKnown RBP3.63□□□□□ -1.83
VRK3-204ENST00000593912 TNFRSF8P28908 595 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 NFATC3Q12968 1075 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 PAK2Q13177 524 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 PTGDRQ13258 359 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 GRM2Q14416 872 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 PWP2Q15269 919 aaKnown RBP3.63□□□□□ -1.83
VRK3-204ENST00000593912 SLFN13Q68D06 897 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 NFXL1Q6ZNB6 911 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 LRRC69Q6ZNQ3 347 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 RNF207Q6ZRF8 634 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 C16orf86Q6ZW13 317 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 KCTD1Q719H9 257 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 ZNF579Q8NAF0 562 aaKnown RBP3.63□□□□□ -1.83
VRK3-204ENST00000593912 ITFG1Q8TB96 612 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 CLEC4DQ8WXI8 215 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 FAM3CQ92520 227 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 PHKBQ93100 1093 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 EMID1Q96A84 441 aaPredicted RBP3.63□□□□□ -1.83
VRK3-204ENST00000593912 TMEM169Q96HH4 297 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 ADAM2Q99965 735 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 IER2Q9BTL4 223 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 FTHL17Q9BXU8 183 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 USP44Q9H0E7 712 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 FAM49AQ9H0Q0 323 aaPredicted RBP3.63□□□□□ -1.83
VRK3-204ENST00000593912 NYAP2Q9P242 653 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 METRNQ9UJH8 293 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 FBXO3Q9UK99 471 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 INVSQ9Y283 1065 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 TELO2Q9Y4R8 837 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 IRAK3Q9Y616 596 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 STK24Q9Y6E0 443 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 MRVI1Q9Y6F6 885 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 FRMPD4Q14CM0 1322 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 SALL3Q9BXA9 1300 aa3.63□□□□□ -1.83
VRK3-204ENST00000593912 MAGEB6P1A0A0J9YX57 407 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 C9IYK1 514 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 NRG2O14511 850 aaPredicted RBP3.62□□□□□ -1.83
VRK3-204ENST00000593912 APAF1O14727 1248 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 SH3BP5O60239 455 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 PPFIA4O75335 1185 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 VAMP4O75379 141 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 GGPS1O95749 300 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 UQCRFS1P1P0C7P4 283 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 FDX1P10109 184 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 ENGP17813 658 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 CCNE1P24864 410 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 RARSP54136 660 aaKnown RBP3.62□□□□□ -1.83
VRK3-204ENST00000593912 BCAR1P56945 870 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 MRPS6P82932 125 aaKnown RBP3.62□□□□□ -1.83
VRK3-204ENST00000593912 SP2Q02086 613 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 CALD1Q05682 793 aaKnown RBP3.62□□□□□ -1.83
VRK3-204ENST00000593912 NFX1Q12986 1120 aaKnown RBP3.62□□□□□ -1.83
VRK3-204ENST00000593912 CAMK2BQ13554 666 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 LAMC2Q13753 1193 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 TRIP6Q15654 476 aaKnown RBP3.62□□□□□ -1.83
VRK3-204ENST00000593912 ELF2Q15723 593 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 TRIM61Q5EBN2 209 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 TTC39AQ5SRH9 613 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 MYSM1Q5VVJ2 828 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 MTSS1LQ765P7 747 aa3.62□□□□□ -1.83
VRK3-204ENST00000593912 KRT25Q7Z3Z0 450 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms