RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 CDC37Q16543 378 aaPredicted RBP13.64□□□□□ -0.23
ZNF558-202ENST00000593891 STOX1Q6ZVD7 989 aa13.64□□□□□ -0.23
ZNF558-202ENST00000593891 CACNA2D4Q7Z3S7 1137 aa13.64□□□□□ -0.23
ZNF558-202ENST00000593891 IFNL3Q8IZI9 196 aa13.64□□□□□ -0.23
ZNF558-202ENST00000593891 CLASRPQ8N2M8 674 aaKnown RBP13.64□□□□□ -0.23
ZNF558-202ENST00000593891 RNF169Q8NCN4 708 aa13.64□□□□□ -0.23
ZNF558-202ENST00000593891 IGSF21Q96ID5 467 aa13.64□□□□□ -0.23
ZNF558-202ENST00000593891 TMEM47Q9BQJ4 181 aa13.64□□□□□ -0.23
ZNF558-202ENST00000593891 PHF20Q9BVI0 1012 aa13.64□□□□□ -0.23
ZNF558-202ENST00000593891 ADAMTS10Q9H324 1103 aa13.64□□□□□ -0.23
ZNF558-202ENST00000593891 SMOC1Q9H4F8 434 aa13.64□□□□□ -0.23
ZNF558-202ENST00000593891 CLMPQ9H6B4 373 aa13.64□□□□□ -0.23
ZNF558-202ENST00000593891 LMAN1LQ9HAT1 526 aa13.64□□□□□ -0.23
ZNF558-202ENST00000593891 RNF19AQ9NV58 838 aa13.64□□□□□ -0.23
ZNF558-202ENST00000593891 MAP3K20Q9NYL2 800 aaKnown RBP13.64□□□□□ -0.23
ZNF558-202ENST00000593891 CDH7Q9ULB5 785 aa13.64□□□□□ -0.23
ZNF558-202ENST00000593891 PATL2C9JE40 543 aaKnown RBP13.63□□□□□ -0.23
ZNF558-202ENST00000593891 RANBP6O60518 1105 aaKnown RBP13.63□□□□□ -0.23
ZNF558-202ENST00000593891 NTRK1P04629 796 aa13.63□□□□□ -0.23
ZNF558-202ENST00000593891 INSRRP14616 1297 aa13.63□□□□□ -0.23
ZNF558-202ENST00000593891 FSHRP23945 695 aa13.63□□□□□ -0.23
ZNF558-202ENST00000593891 MPLP40238 635 aa13.63□□□□□ -0.23
ZNF558-202ENST00000593891 FGD1P98174 961 aa13.63□□□□□ -0.23
ZNF558-202ENST00000593891 PPARAQ07869 468 aa13.63□□□□□ -0.23
ZNF558-202ENST00000593891 ZNF707Q96C28 371 aaPredicted RBP13.63□□□□□ -0.23
ZNF558-202ENST00000593891 HEBP1Q9NRV9 189 aa13.63□□□□□ -0.23
ZNF558-202ENST00000593891 MRPL17Q9NRX2 175 aaKnown RBP13.63□□□□□ -0.23
ZNF558-202ENST00000593891 FAM221BA6H8Z2 402 aa13.62□□□□□ -0.23
ZNF558-202ENST00000593891 SPATA31C2B4DYI2 1134 aa13.62□□□□□ -0.23
ZNF558-202ENST00000593891 H0Y626 953 aa13.62□□□□□ -0.23
ZNF558-202ENST00000593891 ZC3H11AO75152 810 aaKnown RBP eCLIP13.62□□□□□ -0.23
ZNF558-202ENST00000593891 TRIM16O95361 564 aa13.62□□□□□ -0.23
ZNF558-202ENST00000593891 GLUD1P00367 558 aa13.62□□□□□ -0.23
ZNF558-202ENST00000593891 SSBP05455 408 aaKnown RBP eCLIP13.62□□□□□ -0.23
ZNF558-202ENST00000593891 ADH1AP07327 375 aa13.62□□□□□ -0.23
ZNF558-202ENST00000593891 MYBP10242 640 aa13.62□□□□□ -0.23
ZNF558-202ENST00000593891 RAP1GAPP47736 663 aa13.62□□□□□ -0.23
ZNF558-202ENST00000593891 HSD17B4P51659 736 aa13.62□□□□□ -0.23
ZNF558-202ENST00000593891 SCAPQ12770 1279 aa13.62□□□□□ -0.23
ZNF558-202ENST00000593891 GPATCH4Q5T3I0 446 aaKnown RBP13.62□□□□□ -0.23
ZNF558-202ENST00000593891 TMEM173Q86WV6 379 aaPredicted RBP13.62□□□□□ -0.23
ZNF558-202ENST00000593891 IL31RAQ8NI17 732 aa13.62□□□□□ -0.23
ZNF558-202ENST00000593891 HDAC7Q8WUI4 952 aa13.62□□□□□ -0.23
ZNF558-202ENST00000593891 NT5C3AQ9H0P0 336 aa13.62□□□□□ -0.23
ZNF558-202ENST00000593891 SMARCAD1Q9H4L7 1026 aa13.62□□□□□ -0.23
ZNF558-202ENST00000593891 CCDC86Q9H6F5 360 aaKnown RBP13.62□□□□□ -0.23
ZNF558-202ENST00000593891 LOXHD1Q8IVV2 1947 aa13.62□□□□□ -0.23
ZNF558-202ENST00000593891 ASXL3Q9C0F0 2248 aa13.62□□□□□ -0.23
ZNF558-202ENST00000593891 SMIM35A0A1B0GVV1 85 aa13.61□□□□□ -0.23
ZNF558-202ENST00000593891 FIBPO43427 364 aa13.61□□□□□ -0.23
ZNF558-202ENST00000593891 ZSCAN20P17040 1043 aaPredicted RBP13.61□□□□□ -0.23
ZNF558-202ENST00000593891 CLLU1OSQ5K130 101 aa13.61□□□□□ -0.23
ZNF558-202ENST00000593891 TCEAL6Q6IPX3 200 aa13.61□□□□□ -0.23
ZNF558-202ENST00000593891 SPEM1Q8N4L4 309 aa13.61□□□□□ -0.23
ZNF558-202ENST00000593891 GIMAP8Q8ND71 665 aaPredicted RBP13.61□□□□□ -0.23
ZNF558-202ENST00000593891 DEFB124Q8NES8 71 aa13.61□□□□□ -0.23
ZNF558-202ENST00000593891 TCEAL3Q969E4 200 aa13.61□□□□□ -0.23
ZNF558-202ENST00000593891 UBA5Q9GZZ9 404 aa13.61□□□□□ -0.23
ZNF558-202ENST00000593891 SLC32A1Q9H598 525 aa13.61□□□□□ -0.23
ZNF558-202ENST00000593891 ZDHHC7Q9NXF8 308 aa13.61□□□□□ -0.23
ZNF558-202ENST00000593891 EXOC6BQ9Y2D4 811 aa13.61□□□□□ -0.23
ZNF558-202ENST00000593891 TELO2Q9Y4R8 837 aa13.61□□□□□ -0.23
ZNF558-202ENST00000593891 SHISA7A6NL88 538 aa13.6□□□□□ -0.23
ZNF558-202ENST00000593891 GPAA1O43292 621 aa13.6□□□□□ -0.23
ZNF558-202ENST00000593891 STAM2O75886 525 aa13.6□□□□□ -0.23
ZNF558-202ENST00000593891 PAPSS2O95340 614 aaPredicted RBP13.6□□□□□ -0.23
ZNF558-202ENST00000593891 ATP5JP18859 108 aa13.6□□□□□ -0.23
ZNF558-202ENST00000593891 DSC3Q14574 896 aa13.6□□□□□ -0.23
ZNF558-202ENST00000593891 HSP90AB4PQ58FF6 505 aa13.6□□□□□ -0.23
ZNF558-202ENST00000593891 WDR5BQ86VZ2 330 aa13.6□□□□□ -0.23
ZNF558-202ENST00000593891 ECHDC2Q86YB7 292 aa13.6□□□□□ -0.23
ZNF558-202ENST00000593891 ZNF687Q8N1G0 1237 aa13.6□□□□□ -0.23
ZNF558-202ENST00000593891 HELQQ8TDG4 1101 aa13.6□□□□□ -0.23
ZNF558-202ENST00000593891 SEPT1Q8WYJ6 367 aa13.6□□□□□ -0.23
ZNF558-202ENST00000593891 KXD1Q9BQD3 176 aa13.6□□□□□ -0.23
ZNF558-202ENST00000593891 SENP7Q9BQF6 1050 aa13.6□□□□□ -0.23
ZNF558-202ENST00000593891 PRKD2Q9BZL6 878 aa13.6□□□□□ -0.23
ZNF558-202ENST00000593891 NAPBQ9H115 298 aa13.6□□□□□ -0.23
ZNF558-202ENST00000593891 PLEKHA4Q9H4M7 779 aa13.6□□□□□ -0.23
ZNF558-202ENST00000593891 SSX2IPQ9Y2D8 614 aa13.6□□□□□ -0.23
ZNF558-202ENST00000593891 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.6□□□□□ -0.23
ZNF558-202ENST00000593891 C2orf16Q68DN1 1984 aa13.6□□□□□ -0.23
ZNF558-202ENST00000593891 PIEZO2Q9H5I5 2752 aa13.59□□□□□ -0.23
ZNF558-202ENST00000593891 PAPLNO95428 1278 aa13.59□□□□□ -0.23
ZNF558-202ENST00000593891 CT47B1P0C2W7 299 aaPredicted RBP13.59□□□□□ -0.23
ZNF558-202ENST00000593891 AK2P54819 239 aa13.59□□□□□ -0.23
ZNF558-202ENST00000593891 SAMD3Q8N6K7 520 aa13.59□□□□□ -0.23
ZNF558-202ENST00000593891 RHPN1Q8TCX5 695 aa13.59□□□□□ -0.23
ZNF558-202ENST00000593891 TMEM40Q8WWA1 233 aa13.59□□□□□ -0.23
ZNF558-202ENST00000593891 RSPH1Q8WYR4 309 aa13.59□□□□□ -0.23
ZNF558-202ENST00000593891 APPBP2Q92624 585 aa13.59□□□□□ -0.23
ZNF558-202ENST00000593891 OSBP2Q969R2 916 aa13.59□□□□□ -0.23
ZNF558-202ENST00000593891 INPP4AQ96PE3 977 aaPredicted RBP13.59□□□□□ -0.23
ZNF558-202ENST00000593891 BCL11AQ9H165 835 aa13.59□□□□□ -0.23
ZNF558-202ENST00000593891 CDHR5Q9HBB8 845 aa13.59□□□□□ -0.23
ZNF558-202ENST00000593891 TMEM9BQ9NQ34 198 aa13.59□□□□□ -0.23
ZNF558-202ENST00000593891 TCP11L1Q9NUJ3 509 aa13.59□□□□□ -0.23
ZNF558-202ENST00000593891 RAXQ9Y2V3 346 aa13.59□□□□□ -0.23
ZNF558-202ENST00000593891 KALRNO60229 2985 aa13.59□□□□□ -0.23
ZNF558-202ENST00000593891 FREM2Q5SZK8 3169 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms