RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 SLKQ9H2G2 1235 aaPredicted RBP22.99■■□□□ 1.27
TRIM47-207ENST00000593089 SUCLA2Q9P2R7 463 aaPredicted RBP22.99■■□□□ 1.27
TRIM47-207ENST00000593089 IGKV6-21A0A0C4DH24 114 aa22.98■■□□□ 1.27
TRIM47-207ENST00000593089 CCDC194A0A1B0GVG4 234 aa22.98■■□□□ 1.27
TRIM47-207ENST00000593089 FSD2A1L4K1 749 aa22.98■■□□□ 1.27
TRIM47-207ENST00000593089 EML1O00423 815 aa22.98■■□□□ 1.27
TRIM47-207ENST00000593089 MAFO75444 373 aaPredicted RBP22.98■■□□□ 1.27
TRIM47-207ENST00000593089 CDKL5O76039 1030 aa22.98■■□□□ 1.27
TRIM47-207ENST00000593089 EOMESO95936 686 aa22.98■■□□□ 1.27
TRIM47-207ENST00000593089 ATF7P17544 494 aaPredicted RBP22.98■■□□□ 1.27
TRIM47-207ENST00000593089 PSMC5P62195 406 aa22.98■■□□□ 1.27
TRIM47-207ENST00000593089 CDC42EP1Q00587 391 aa22.98■■□□□ 1.27
TRIM47-207ENST00000593089 KRT17Q04695 432 aa22.98■■□□□ 1.27
TRIM47-207ENST00000593089 PLA2G4FQ68DD2 849 aa22.98■■□□□ 1.27
TRIM47-207ENST00000593089 ANO5Q75V66 913 aa22.98■■□□□ 1.27
TRIM47-207ENST00000593089 SPG21Q9NZD8 308 aa22.98■■□□□ 1.27
TRIM47-207ENST00000593089 HIDE1A8MVS5 230 aa22.97■■□□□ 1.27
TRIM47-207ENST00000593089 SFPQP23246 707 aaKnown RBP eCLIP22.97■■□□□ 1.27
TRIM47-207ENST00000593089 LLGL2Q6P1M3 1020 aa22.97■■□□□ 1.27
TRIM47-207ENST00000593089 TMC7Q7Z402 723 aa22.97■■□□□ 1.27
TRIM47-207ENST00000593089 NEK8Q86SG6 692 aa22.97■■□□□ 1.27
TRIM47-207ENST00000593089 KSR1Q8IVT5 923 aa22.97■■□□□ 1.27
TRIM47-207ENST00000593089 CHST12Q9NRB3 414 aa22.97■■□□□ 1.27
TRIM47-207ENST00000593089 GJB4Q9NTQ9 266 aa22.97■■□□□ 1.27
TRIM47-207ENST00000593089 LOC730098B7Z3J9 87 aa22.96■■□□□ 1.27
TRIM47-207ENST00000593089 SRGAP2BP0DMP2 458 aa22.96■■□□□ 1.27
TRIM47-207ENST00000593089 XBP1P17861 261 aa22.96■■□□□ 1.27
TRIM47-207ENST00000593089 TECP42680 631 aa22.96■■□□□ 1.27
TRIM47-207ENST00000593089 LONRF3Q496Y0 759 aa22.96■■□□□ 1.27
TRIM47-207ENST00000593089 TWF2Q6IBS0 349 aaKnown RBP22.96■■□□□ 1.27
TRIM47-207ENST00000593089 ZNF410Q86VK4 478 aa22.96■■□□□ 1.27
TRIM47-207ENST00000593089 SLC39A11Q8N1S5 342 aa22.96■■□□□ 1.27
TRIM47-207ENST00000593089 RPGRIP1Q96KN7 1286 aa22.96■■□□□ 1.27
TRIM47-207ENST00000593089 NLRP4Q96MN2 994 aa22.96■■□□□ 1.27
TRIM47-207ENST00000593089 PHF7Q9BWX1 381 aaPredicted RBP22.96■■□□□ 1.27
TRIM47-207ENST00000593089 MRPL9Q9BYD2 267 aaKnown RBP22.96■■□□□ 1.27
TRIM47-207ENST00000593089 KCNMB3Q9NPA1 279 aa22.96■■□□□ 1.27
TRIM47-207ENST00000593089 NGRNQ9NPE2 291 aaKnown RBP22.96■■□□□ 1.27
TRIM47-207ENST00000593089 VAV3Q9UKW4 847 aa22.96■■□□□ 1.27
TRIM47-207ENST00000593089 PIN4Q9Y237 131 aaKnown RBP22.96■■□□□ 1.27
TRIM47-207ENST00000593089 NT5C1B-RDH14C9J2C7 533 aa22.95■■□□□ 1.26
TRIM47-207ENST00000593089 CCNT1O60563 726 aaKnown RBP22.95■■□□□ 1.26
TRIM47-207ENST00000593089 HOXD11P31277 338 aaPredicted RBP22.95■■□□□ 1.26
TRIM47-207ENST00000593089 PHKA2P46019 1235 aa22.95■■□□□ 1.26
TRIM47-207ENST00000593089 QARSP47897 775 aaKnown RBP22.95■■□□□ 1.26
TRIM47-207ENST00000593089 NPEPPSP55786 919 aa22.95■■□□□ 1.26
TRIM47-207ENST00000593089 PPP2R5CQ13362 524 aa22.95■■□□□ 1.26
TRIM47-207ENST00000593089 KCNC3Q14003 757 aa22.95■■□□□ 1.26
TRIM47-207ENST00000593089 ANKRD54Q6NXT1 300 aa22.95■■□□□ 1.26
TRIM47-207ENST00000593089 PIK3AP1Q6ZUJ8 805 aa22.95■■□□□ 1.26
TRIM47-207ENST00000593089 HFE2Q6ZVN8 426 aa22.95■■□□□ 1.26
TRIM47-207ENST00000593089 OXER1Q8TDS5 423 aa22.95■■□□□ 1.26
TRIM47-207ENST00000593089 LPPQ93052 612 aa22.95■■□□□ 1.26
TRIM47-207ENST00000593089 FAM20AQ96MK3 541 aa22.95■■□□□ 1.26
TRIM47-207ENST00000593089 APOL5Q9BWW9 433 aa22.95■■□□□ 1.26
TRIM47-207ENST00000593089 INO80BQ9C086 356 aaPredicted RBP22.95■■□□□ 1.26
TRIM47-207ENST00000593089 CYP26B1Q9NR63 512 aa22.95■■□□□ 1.26
TRIM47-207ENST00000593089 STK36Q9NRP7 1315 aa22.95■■□□□ 1.26
TRIM47-207ENST00000593089 TPCN1Q9ULQ1 816 aa22.95■■□□□ 1.26
TRIM47-207ENST00000593089 PFKFB2O60825 505 aa22.94■■□□□ 1.26
TRIM47-207ENST00000593089 CA8P35219 290 aa22.94■■□□□ 1.26
TRIM47-207ENST00000593089 BCAR1P56945 870 aa22.94■■□□□ 1.26
TRIM47-207ENST00000593089 PPP4R3AQ6IN85 833 aa22.94■■□□□ 1.26
TRIM47-207ENST00000593089 TMEM184AQ6ZMB5 413 aa22.94■■□□□ 1.26
TRIM47-207ENST00000593089 CATSPER4Q7RTX7 472 aa22.94■■□□□ 1.26
TRIM47-207ENST00000593089 ZNF579Q8NAF0 562 aaKnown RBP22.94■■□□□ 1.26
TRIM47-207ENST00000593089 SUSD6Q92537 303 aa22.94■■□□□ 1.26
TRIM47-207ENST00000593089 EDAQ92838 391 aa22.94■■□□□ 1.26
TRIM47-207ENST00000593089 JPH2Q9BR39 696 aaPredicted RBP22.94■■□□□ 1.26
TRIM47-207ENST00000593089 MARCH6O60337 910 aa22.93■■□□□ 1.26
TRIM47-207ENST00000593089 GCFC2P16383 781 aaKnown RBP22.93■■□□□ 1.26
TRIM47-207ENST00000593089 ALDH7A1P49419 539 aaKnown RBP22.93■■□□□ 1.26
TRIM47-207ENST00000593089 SMC1AQ14683 1233 aaKnown RBP22.93■■□□□ 1.26
TRIM47-207ENST00000593089 CBX2Q14781 532 aaPredicted RBP22.93■■□□□ 1.26
TRIM47-207ENST00000593089 S1PR5Q9H228 398 aa22.93■■□□□ 1.26
TRIM47-207ENST00000593089 WRAP73Q9P2S5 460 aaPredicted RBP22.93■■□□□ 1.26
TRIM47-207ENST00000593089 DKC1O60832 514 aaKnown RBP eCLIP22.92■■□□□ 1.26
TRIM47-207ENST00000593089 ZC3H11AO75152 810 aaKnown RBP eCLIP22.92■■□□□ 1.26
TRIM47-207ENST00000593089 P4HBP07237 508 aaKnown RBP22.92■■□□□ 1.26
TRIM47-207ENST00000593089 POLGP54098 1239 aaPredicted RBP22.92■■□□□ 1.26
TRIM47-207ENST00000593089 SYCE2Q6PIF2 218 aa22.92■■□□□ 1.26
TRIM47-207ENST00000593089 POTEDQ86YR6 584 aa22.92■■□□□ 1.26
TRIM47-207ENST00000593089 SLC7A3Q8WY07 619 aa22.92■■□□□ 1.26
TRIM47-207ENST00000593089 HAS1Q92839 578 aa22.92■■□□□ 1.26
TRIM47-207ENST00000593089 TMEM169Q96HH4 297 aa22.92■■□□□ 1.26
TRIM47-207ENST00000593089 CEP170P1Q96L14 293 aa22.92■■□□□ 1.26
TRIM47-207ENST00000593089 TRAIPQ9BWF2 469 aa22.92■■□□□ 1.26
TRIM47-207ENST00000593089 BMP2KQ9NSY1 1161 aaPredicted RBP22.92■■□□□ 1.26
TRIM47-207ENST00000593089 FAM105AQ9NUU6 356 aa22.92■■□□□ 1.26
TRIM47-207ENST00000593089 INPP5FQ9Y2H2 1132 aa22.92■■□□□ 1.26
TRIM47-207ENST00000593089 COL4A3BPQ9Y5P4 624 aa22.92■■□□□ 1.26
TRIM47-207ENST00000593089 MEIS3P2A8K0S8 358 aa22.91■■□□□ 1.26
TRIM47-207ENST00000593089 CTDNEP1O95476 244 aa22.91■■□□□ 1.26
TRIM47-207ENST00000593089 NEFLP07196 543 aa22.91■■□□□ 1.26
TRIM47-207ENST00000593089 SKIP12755 728 aa22.91■■□□□ 1.26
TRIM47-207ENST00000593089 EARS2Q5JPH6 523 aaKnown RBP22.91■■□□□ 1.26
TRIM47-207ENST00000593089 NCAPH2Q6IBW4 605 aa22.91■■□□□ 1.26
TRIM47-207ENST00000593089 MRPL43Q8N983 215 aaKnown RBP22.91■■□□□ 1.26
TRIM47-207ENST00000593089 TMEM143Q96AN5 459 aa22.91■■□□□ 1.26
TRIM47-207ENST00000593089 NAP1L4Q99733 375 aaKnown RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms