RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 LYPLA2O95372 231 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 CAVIN2O95810 425 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 ACTN1P12814 892 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 MUTP22033 750 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 YWHABP31946 246 aaKnown RBP13.21□□□□□ -0.29
DDX39A-219ENST00000592927 IGBP1P78318 339 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 TCF15Q12870 199 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 E2F4Q16254 413 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 PUS10Q3MIT2 529 aaKnown RBP13.21□□□□□ -0.29
DDX39A-219ENST00000592927 RRAGBQ5VZM2 374 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 GDF6Q6KF10 455 aaPredicted RBP13.21□□□□□ -0.29
DDX39A-219ENST00000592927 POTEGQ6S5H5 508 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 KCTD17Q8N5Z5 321 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 PDILTQ8N807 584 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 RASSF8Q8NHQ8 419 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 CDK5RAP3Q96JB5 506 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 CCDC43Q96MW1 224 aaKnown RBP13.21□□□□□ -0.29
DDX39A-219ENST00000592927 NACC1Q96RE7 527 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 FUCA2Q9BTY2 467 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 MMTAG2Q9BU76 263 aaKnown RBP13.21□□□□□ -0.29
DDX39A-219ENST00000592927 NIFKQ9BYG3 293 aaKnown RBP13.21□□□□□ -0.29
DDX39A-219ENST00000592927 TRMT13Q9NUP7 481 aaKnown RBP13.21□□□□□ -0.29
DDX39A-219ENST00000592927 KIAA1468Q9P260 1216 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 SERTAD1Q9UHV2 236 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 KIAA1024Q9UPX6 916 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 NOD1Q9Y239 953 aa13.21□□□□□ -0.29
DDX39A-219ENST00000592927 LOXHD1Q8IVV2 1947 aa13.21□□□□□ -0.3
DDX39A-219ENST00000592927 COL1A2P08123 1366 aa13.2□□□□□ -0.3
DDX39A-219ENST00000592927 SCN10AQ9Y5Y9 1956 aa13.2□□□□□ -0.3
DDX39A-219ENST00000592927 FSD2A1L4K1 749 aa13.2□□□□□ -0.3
DDX39A-219ENST00000592927 H3BQ06 376 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-219ENST00000592927 STBD1O95210 358 aa13.2□□□□□ -0.3
DDX39A-219ENST00000592927 MYL1P05976 194 aa13.2□□□□□ -0.3
DDX39A-219ENST00000592927 XRCC6P12956 609 aaKnown RBP eCLIP13.2□□□□□ -0.3
DDX39A-219ENST00000592927 STAT6P42226 847 aa13.2□□□□□ -0.3
DDX39A-219ENST00000592927 ZNF200P98182 395 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-219ENST00000592927 ZP2Q05996 745 aa13.2□□□□□ -0.3
DDX39A-219ENST00000592927 PTGISQ16647 500 aa13.2□□□□□ -0.3
DDX39A-219ENST00000592927 ANO5Q75V66 913 aa13.2□□□□□ -0.3
DDX39A-219ENST00000592927 ERMP1Q7Z2K6 904 aa13.2□□□□□ -0.3
DDX39A-219ENST00000592927 PIGOQ8TEQ8 1089 aa13.2□□□□□ -0.3
DDX39A-219ENST00000592927 LMBR1Q8WVP7 490 aa13.2□□□□□ -0.3
DDX39A-219ENST00000592927 DHX58Q96C10 678 aa13.2□□□□□ -0.3
DDX39A-219ENST00000592927 PANK2Q9BZ23 570 aa13.2□□□□□ -0.3
DDX39A-219ENST00000592927 NT5C3AQ9H0P0 336 aa13.2□□□□□ -0.3
DDX39A-219ENST00000592927 SUGCTQ9HAC7 445 aa13.2□□□□□ -0.3
DDX39A-219ENST00000592927 ANKEF1Q9NU02 776 aa13.2□□□□□ -0.3
DDX39A-219ENST00000592927 A0A087WWV3 80 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 A0A087X0B3 334 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 LCHNA4D1U4 455 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 TMEM150BA6NC51 233 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 C19orf67A6NJJ6 358 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 ZBTB39O15060 712 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 HOXC8P31273 242 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 TYRO3Q06418 890 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 HIC1Q14526 733 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 KARSQ15046 597 aaKnown RBP13.19□□□□□ -0.3
DDX39A-219ENST00000592927 POSTNQ15063 836 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 ECM1Q16610 540 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 MTERF2Q49AM1 385 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 XKR9Q5GH70 373 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 HYIQ5T013 277 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 PLA2G4FQ68DD2 849 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 TRAPPC12Q8WVT3 735 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 CEP170P1Q96L14 293 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 PLIN2Q99541 437 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 PRRX2Q99811 253 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 CYP26B1Q9NR63 512 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 STK17AQ9UEE5 414 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 TUBE1Q9UJT0 475 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 MTUS1Q9ULD2 1270 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 DNM3Q9UQ16 869 aa13.19□□□□□ -0.3
DDX39A-219ENST00000592927 MBLAC1A4D2B0 266 aaPredicted RBP13.18□□□□□ -0.3
DDX39A-219ENST00000592927 ZBTB42B2RXF5 422 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 MAGEB2O15479 319 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 TREHO43280 583 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 SMC2O95347 1197 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 KLRC1P26715 233 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 IRS1P35568 1242 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 NPEPPSP55786 919 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 ADAM17P78536 824 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 TBC1D8BQ0IIM8 1120 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 TARBP2Q15633 366 aaKnown RBP13.18□□□□□ -0.3
DDX39A-219ENST00000592927 STX1AQ16623 288 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 MARCH8Q5T0T0 291 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 L1TD1Q5T7N2 865 aaKnown RBP13.18□□□□□ -0.3
DDX39A-219ENST00000592927 NT5DC1Q5TFE4 455 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 MTHFD1LQ6UB35 978 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 GAS2L3Q86XJ1 694 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 EXOC8Q8IYI6 725 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 PNMA5Q96PV4 448 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 SH2D3AQ9BRG2 576 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 LRRC27Q9C0I9 530 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 ANO10Q9NW15 660 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 PRKAG3Q9UGI9 489 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 MUTYHQ9UIF7 546 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 DBR1Q9UK59 544 aaKnown RBP13.18□□□□□ -0.3
DDX39A-219ENST00000592927 PPME1Q9Y570 386 aa13.18□□□□□ -0.3
DDX39A-219ENST00000592927 ARHGEF35A5YM69 484 aa13.17□□□□□ -0.3
DDX39A-219ENST00000592927 CYP2C9P11712 490 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms