RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 TBX3O15119 743 aa18.02■□□□□ 0.48
CIRBP-240ENST00000592815 LARGE1O95461 756 aa18.02■□□□□ 0.48
CIRBP-240ENST00000592815 EOMESO95936 686 aa18.02■□□□□ 0.48
CIRBP-240ENST00000592815 P4HBP07237 508 aaKnown RBP18.02■□□□□ 0.48
CIRBP-240ENST00000592815 KRT2P35908 639 aa18.02■□□□□ 0.48
CIRBP-240ENST00000592815 NEK4P51957 841 aa18.02■□□□□ 0.48
CIRBP-240ENST00000592815 SMAD4Q13485 552 aaKnown RBP18.02■□□□□ 0.48
CIRBP-240ENST00000592815 EPHA7Q15375 998 aa18.02■□□□□ 0.48
CIRBP-240ENST00000592815 SMAD2Q15796 467 aaKnown RBP18.02■□□□□ 0.48
CIRBP-240ENST00000592815 CLLU1OSQ5K130 101 aa18.02■□□□□ 0.48
CIRBP-240ENST00000592815 KCNT2Q6UVM3 1135 aa18.02■□□□□ 0.48
CIRBP-240ENST00000592815 ZNF410Q86VK4 478 aa18.02■□□□□ 0.48
CIRBP-240ENST00000592815 POTEDQ86YR6 584 aa18.02■□□□□ 0.48
CIRBP-240ENST00000592815 ZNF579Q8NAF0 562 aaKnown RBP18.02■□□□□ 0.48
CIRBP-240ENST00000592815 GTF3C6Q969F1 213 aa18.02■□□□□ 0.48
CIRBP-240ENST00000592815 CEP170P1Q96L14 293 aa18.02■□□□□ 0.48
CIRBP-240ENST00000592815 INO80BQ9C086 356 aaPredicted RBP18.02■□□□□ 0.48
CIRBP-240ENST00000592815 BRMS1Q9HCU9 246 aa18.02■□□□□ 0.48
CIRBP-240ENST00000592815 CLEC1BQ9P126 229 aa18.02■□□□□ 0.48
CIRBP-240ENST00000592815 WRAP73Q9P2S5 460 aaPredicted RBP18.02■□□□□ 0.48
CIRBP-240ENST00000592815 PUF60Q9UHX1 559 aaKnown RBP18.02■□□□□ 0.48
CIRBP-240ENST00000592815 C19orf67A6NJJ6 358 aa18.01■□□□□ 0.47
CIRBP-240ENST00000592815 GPR37L1O60883 481 aa18.01■□□□□ 0.47
CIRBP-240ENST00000592815 BAG4O95429 457 aaKnown RBP18.01■□□□□ 0.47
CIRBP-240ENST00000592815 SFPQP23246 707 aaKnown RBP eCLIP18.01■□□□□ 0.47
CIRBP-240ENST00000592815 PBX3P40426 434 aa18.01■□□□□ 0.47
CIRBP-240ENST00000592815 PLCB3Q01970 1234 aa18.01■□□□□ 0.47
CIRBP-240ENST00000592815 NCAPH2Q6IBW4 605 aa18.01■□□□□ 0.47
CIRBP-240ENST00000592815 PDE12Q6L8Q7 609 aaKnown RBP18.01■□□□□ 0.47
CIRBP-240ENST00000592815 ZNF598Q86UK7 904 aaKnown RBP18.01■□□□□ 0.47
CIRBP-240ENST00000592815 LRRC43Q8N309 656 aa18.01■□□□□ 0.47
CIRBP-240ENST00000592815 HELQQ8TDG4 1101 aa18.01■□□□□ 0.47
CIRBP-240ENST00000592815 MRPS27Q92552 414 aaKnown RBP18.01■□□□□ 0.47
CIRBP-240ENST00000592815 MSLNLQ96KJ4 702 aa18.01■□□□□ 0.47
CIRBP-240ENST00000592815 NLRP4Q96MN2 994 aa18.01■□□□□ 0.47
CIRBP-240ENST00000592815 ZNF558Q96NG5 402 aa18.01■□□□□ 0.47
CIRBP-240ENST00000592815 C11orf16Q9NQ32 467 aa18.01■□□□□ 0.47
CIRBP-240ENST00000592815 RGL1Q9NZL6 768 aa18.01■□□□□ 0.47
CIRBP-240ENST00000592815 EIF5BO60841 1220 aaKnown RBP18■□□□□ 0.47
CIRBP-240ENST00000592815 ALADP13716 330 aa18■□□□□ 0.47
CIRBP-240ENST00000592815 POLGP54098 1239 aaPredicted RBP18■□□□□ 0.47
CIRBP-240ENST00000592815 KRT17Q04695 432 aa18■□□□□ 0.47
CIRBP-240ENST00000592815 TWF2Q6IBS0 349 aaKnown RBP18■□□□□ 0.47
CIRBP-240ENST00000592815 CATSPER4Q7RTX7 472 aa18■□□□□ 0.47
CIRBP-240ENST00000592815 SLFN12Q8IYM2 578 aa18■□□□□ 0.47
CIRBP-240ENST00000592815 NSUN7Q8NE18 718 aaKnown RBP18■□□□□ 0.47
CIRBP-240ENST00000592815 SLC7A3Q8WY07 619 aa18■□□□□ 0.47
CIRBP-240ENST00000592815 TNFRSF25Q93038 417 aa18■□□□□ 0.47
CIRBP-240ENST00000592815 TMEM143Q96AN5 459 aa18■□□□□ 0.47
CIRBP-240ENST00000592815 DYDC2Q96IM9 177 aa18■□□□□ 0.47
CIRBP-240ENST00000592815 SPG21Q9NZD8 308 aa18■□□□□ 0.47
CIRBP-240ENST00000592815 BARX2Q9UMQ3 279 aaPredicted RBP18■□□□□ 0.47
CIRBP-240ENST00000592815 PIN4Q9Y237 131 aaKnown RBP18■□□□□ 0.47
CIRBP-240ENST00000592815 LZTS1Q9Y250 596 aa18■□□□□ 0.47
CIRBP-240ENST00000592815 WDR81Q562E7 1941 aa18■□□□□ 0.47
CIRBP-240ENST00000592815 FNDC1Q4ZHG4 1894 aaPredicted RBP17.99■□□□□ 0.47
CIRBP-240ENST00000592815 FSCN2O14926 492 aa17.99■□□□□ 0.47
CIRBP-240ENST00000592815 JAK2O60674 1132 aa17.99■□□□□ 0.47
CIRBP-240ENST00000592815 SEC24BO95487 1268 aa17.99■□□□□ 0.47
CIRBP-240ENST00000592815 EYA4O95677 639 aa17.99■□□□□ 0.47
CIRBP-240ENST00000592815 GLP2RO95838 553 aa17.99■□□□□ 0.47
CIRBP-240ENST00000592815 SRGAP2CP0DJJ0 459 aa17.99■□□□□ 0.47
CIRBP-240ENST00000592815 ATF7P17544 494 aaPredicted RBP17.99■□□□□ 0.47
CIRBP-240ENST00000592815 YWHABP31946 246 aaKnown RBP17.99■□□□□ 0.47
CIRBP-240ENST00000592815 PHKA2P46019 1235 aa17.99■□□□□ 0.47
CIRBP-240ENST00000592815 FOSBP53539 338 aa17.99■□□□□ 0.47
CIRBP-240ENST00000592815 COASYQ13057 564 aa17.99■□□□□ 0.47
CIRBP-240ENST00000592815 CTTNQ14247 550 aaKnown RBP17.99■□□□□ 0.47
CIRBP-240ENST00000592815 LONRF3Q496Y0 759 aa17.99■□□□□ 0.47
CIRBP-240ENST00000592815 PLPP4Q5VZY2 271 aa17.99■□□□□ 0.47
CIRBP-240ENST00000592815 OTUD6AQ7L8S5 288 aa17.99■□□□□ 0.47
CIRBP-240ENST00000592815 TPH2Q8IWU9 490 aa17.99■□□□□ 0.47
CIRBP-240ENST00000592815 C4orf19Q8IY42 314 aa17.99■□□□□ 0.47
CIRBP-240ENST00000592815 EXOC8Q8IYI6 725 aa17.99■□□□□ 0.47
CIRBP-240ENST00000592815 PRPF31Q8WWY3 499 aaKnown RBP17.99■□□□□ 0.47
CIRBP-240ENST00000592815 TCF25Q9BQ70 676 aa17.99■□□□□ 0.47
CIRBP-240ENST00000592815 LXNQ9BS40 222 aa17.99■□□□□ 0.47
CIRBP-240ENST00000592815 COL4A3BPQ9Y5P4 624 aa17.99■□□□□ 0.47
CIRBP-240ENST00000592815 KIAA1671Q9BY89 1806 aa17.98■□□□□ 0.47
CIRBP-240ENST00000592815 ATG2AQ2TAZ0 1938 aa17.98■□□□□ 0.47
CIRBP-240ENST00000592815 BTBD18B2RXH4 712 aa17.98■□□□□ 0.47
CIRBP-240ENST00000592815 ZBTB39O15060 712 aa17.98■□□□□ 0.47
CIRBP-240ENST00000592815 PPM1AP35813 382 aa17.98■□□□□ 0.47
CIRBP-240ENST00000592815 RFC5P40937 340 aa17.98■□□□□ 0.47
CIRBP-240ENST00000592815 RBM10P98175 930 aaKnown RBP17.98■□□□□ 0.47
CIRBP-240ENST00000592815 CYP4A11Q02928 519 aa17.98■□□□□ 0.47
CIRBP-240ENST00000592815 SPIRE1Q08AE8 756 aa17.98■□□□□ 0.47
CIRBP-240ENST00000592815 DUSP6Q16828 381 aa17.98■□□□□ 0.47
CIRBP-240ENST00000592815 XKR9Q5GH70 373 aa17.98■□□□□ 0.47
CIRBP-240ENST00000592815 LPPQ93052 612 aa17.98■□□□□ 0.47
CIRBP-240ENST00000592815 POP1Q99575 1024 aaKnown RBP17.98■□□□□ 0.47
CIRBP-240ENST00000592815 CDCA3Q99618 268 aaPredicted RBP17.98■□□□□ 0.47
CIRBP-240ENST00000592815 TRAIPQ9BWF2 469 aa17.98■□□□□ 0.47
CIRBP-240ENST00000592815 DHX33Q9H6R0 707 aaKnown RBP17.98■□□□□ 0.47
CIRBP-240ENST00000592815 ZSWIM4Q9H7M6 989 aa17.98■□□□□ 0.47
CIRBP-240ENST00000592815 IFT122Q9HBG6 1241 aa17.98■□□□□ 0.47
CIRBP-240ENST00000592815 NGRNQ9NPE2 291 aaKnown RBP17.98■□□□□ 0.47
CIRBP-240ENST00000592815 ENTPD7Q9NQZ7 604 aa17.98■□□□□ 0.47
CIRBP-240ENST00000592815 BMP2KQ9NSY1 1161 aaPredicted RBP17.98■□□□□ 0.47
CIRBP-240ENST00000592815 PCDHA12Q9UN75 941 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms