RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 TYW1Q9NV66 732 aaKnown RBP11.75□□□□□ -0.53
VPS4B-207ENST00000591519 CLEC1BQ9P126 229 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 VPS54Q9P1Q0 977 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 TCEAL9Q9UHQ7 104 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 CD207Q9UJ71 328 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 HCN4Q9Y3Q4 1203 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 SAMM50Q9Y512 469 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 PCDHB12Q9Y5F1 795 aa11.75□□□□□ -0.53
VPS4B-207ENST00000591519 KIAA1671Q9BY89 1806 aa11.74□□□□□ -0.53
VPS4B-207ENST00000591519 LINC01565O15544 149 aa11.74□□□□□ -0.53
VPS4B-207ENST00000591519 DCXO43602 365 aa11.74□□□□□ -0.53
VPS4B-207ENST00000591519 VTNP04004 478 aa11.74□□□□□ -0.53
VPS4B-207ENST00000591519 OATP04181 439 aa11.74□□□□□ -0.53
VPS4B-207ENST00000591519 NLRP11P59045 1033 aaKnown RBP11.74□□□□□ -0.53
VPS4B-207ENST00000591519 CCT2P78371 535 aaKnown RBP11.74□□□□□ -0.53
VPS4B-207ENST00000591519 TOB2Q14106 344 aaPredicted RBP11.74□□□□□ -0.53
VPS4B-207ENST00000591519 TARBP2Q15633 366 aaKnown RBP11.74□□□□□ -0.53
VPS4B-207ENST00000591519 Q4G0T1 1027 aa11.74□□□□□ -0.53
VPS4B-207ENST00000591519 B3GNT9Q6UX72 402 aa11.74□□□□□ -0.53
VPS4B-207ENST00000591519 ADGRD2Q7Z7M1 963 aa11.74□□□□□ -0.53
VPS4B-207ENST00000591519 MBOAT7Q96N66 472 aa11.74□□□□□ -0.53
VPS4B-207ENST00000591519 POP1Q99575 1024 aaKnown RBP11.74□□□□□ -0.53
VPS4B-207ENST00000591519 NIFKQ9BYG3 293 aaKnown RBP11.74□□□□□ -0.53
VPS4B-207ENST00000591519 CWH43Q9H720 699 aa11.74□□□□□ -0.53
VPS4B-207ENST00000591519 ATP6V0A4Q9HBG4 840 aa11.74□□□□□ -0.53
VPS4B-207ENST00000591519 LZTS1Q9Y250 596 aa11.74□□□□□ -0.53
VPS4B-207ENST00000591519 FAM86C2PA6NEL3 165 aa11.73□□□□□ -0.53
VPS4B-207ENST00000591519 TBKBP1A7MCY6 615 aa11.73□□□□□ -0.53
VPS4B-207ENST00000591519 GAS7O60861 476 aa11.73□□□□□ -0.53
VPS4B-207ENST00000591519 PSMD10O75832 226 aa11.73□□□□□ -0.53
VPS4B-207ENST00000591519 FGF18O76093 207 aa11.73□□□□□ -0.53
VPS4B-207ENST00000591519 STBD1O95210 358 aa11.73□□□□□ -0.53
VPS4B-207ENST00000591519 CLCN3P51790 818 aa11.73□□□□□ -0.53
VPS4B-207ENST00000591519 JAK3P52333 1124 aa11.73□□□□□ -0.53
VPS4B-207ENST00000591519 NLRP5P59047 1200 aa11.73□□□□□ -0.53
VPS4B-207ENST00000591519 CDC42EP1Q00587 391 aa11.73□□□□□ -0.53
VPS4B-207ENST00000591519 PLCB3Q01970 1234 aa11.73□□□□□ -0.53
VPS4B-207ENST00000591519 SSRP1Q08945 709 aaKnown RBP11.73□□□□□ -0.53
VPS4B-207ENST00000591519 GALNT17Q6IS24 598 aa11.73□□□□□ -0.53
VPS4B-207ENST00000591519 MOXD1Q6UVY6 613 aa11.73□□□□□ -0.53
VPS4B-207ENST00000591519 TRIM22Q8IYM9 498 aa11.73□□□□□ -0.53
VPS4B-207ENST00000591519 DAGLBQ8NCG7 672 aa11.73□□□□□ -0.53
VPS4B-207ENST00000591519 TBCKQ8TEA7 893 aa11.73□□□□□ -0.53
VPS4B-207ENST00000591519 CEP89Q96ST8 783 aa11.73□□□□□ -0.53
VPS4B-207ENST00000591519 MAP7D2Q96T17 732 aa11.73□□□□□ -0.53
VPS4B-207ENST00000591519 TMEM117Q9H0C3 514 aa11.73□□□□□ -0.53
VPS4B-207ENST00000591519 NCOA5Q9HCD5 579 aaKnown RBP11.73□□□□□ -0.53
VPS4B-207ENST00000591519 PCDHA4Q9UN74 947 aa11.73□□□□□ -0.53
VPS4B-207ENST00000591519 PLXNA4Q9HCM2 1894 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 IGKV6-21A0A0C4DH24 114 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 A0A0U1RQF3 1178 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 FSD2A1L4K1 749 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 FSCN2O14926 492 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 HOXA2O43364 376 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 PPFIA3O75145 1194 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 DEXIO95424 95 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 GLP2RO95838 553 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 EOMESO95936 686 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 FGFR1P11362 822 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 DARSP14868 501 aaKnown RBP11.72□□□□□ -0.53
VPS4B-207ENST00000591519 ZSCAN20P17040 1043 aaPredicted RBP11.72□□□□□ -0.53
VPS4B-207ENST00000591519 LAG3P18627 525 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 NRIP1P48552 1158 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 NDUFV1P49821 464 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 GPC3P51654 580 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 PRSS12P56730 875 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 ERVFC1P60507 584 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 PRKCEQ02156 737 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 KCNC3Q14003 757 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 NPY5RQ15761 445 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 HERC4Q5GLZ8 1057 aaPredicted RBP11.72□□□□□ -0.53
VPS4B-207ENST00000591519 LRCH2Q5VUJ6 765 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 TMEM184AQ6ZMB5 413 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 LRRC55Q6ZSA7 311 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 TRMT1LQ7Z2T5 733 aaKnown RBP11.72□□□□□ -0.53
VPS4B-207ENST00000591519 ECHDC2Q86YB7 292 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 BLIDQ8IZY5 108 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 LRRC71Q8N4P6 559 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 COLGALT1Q8NBJ5 622 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 SMRP1Q8NCR6 262 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 CASD1Q96PB1 797 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 PPP1R16BQ96T49 567 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 CDCA3Q99618 268 aaPredicted RBP11.72□□□□□ -0.53
VPS4B-207ENST00000591519 TEKT3Q9BXF9 490 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 UNC45AQ9H3U1 944 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 TLE6Q9H808 572 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 TLR9Q9NR96 1032 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 RNF19AQ9NV58 838 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 AKT3Q9Y243 479 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 CYP46A1Q9Y6A2 500 aa11.72□□□□□ -0.53
VPS4B-207ENST00000591519 CLUL1Q15846 466 aa11.71□□□□□ -0.53
VPS4B-207ENST00000591519 UGCGQ16739 394 aa11.71□□□□□ -0.53
VPS4B-207ENST00000591519 DUSP6Q16828 381 aa11.71□□□□□ -0.53
VPS4B-207ENST00000591519 XKR3Q5GH77 459 aa11.71□□□□□ -0.53
VPS4B-207ENST00000591519 SPOUT1Q5T280 376 aaKnown RBP11.71□□□□□ -0.53
VPS4B-207ENST00000591519 ZNF598Q86UK7 904 aaKnown RBP11.71□□□□□ -0.53
VPS4B-207ENST00000591519 RNF135Q8IUD6 432 aa11.71□□□□□ -0.53
VPS4B-207ENST00000591519 ETNPPLQ8TBG4 499 aa11.71□□□□□ -0.53
VPS4B-207ENST00000591519 MICAL1Q8TDZ2 1067 aa11.71□□□□□ -0.53
VPS4B-207ENST00000591519 MRPS27Q92552 414 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms