RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 LGALS2P05162 132 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 RPLP1P05386 114 aaKnown RBP7.19□□□□□ -1.26
VPS4B-205ENST00000591383 ASGR1P07306 291 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 SUPT20HL2P0C7V6 817 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 CYP3A7P24462 503 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 CST5P28325 142 aaPredicted RBP7.19□□□□□ -1.26
VPS4B-205ENST00000591383 TCF7P36402 384 aaPredicted RBP7.19□□□□□ -1.26
VPS4B-205ENST00000591383 TXKP42681 527 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 TOB1P50616 345 aaPredicted RBP7.19□□□□□ -1.26
VPS4B-205ENST00000591383 ACLYP53396 1101 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 WDR4P57081 412 aaKnown RBP7.19□□□□□ -1.26
VPS4B-205ENST00000591383 PSMC6P62333 389 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 ORC2Q13416 577 aaPredicted RBP7.19□□□□□ -1.26
VPS4B-205ENST00000591383 KCNA10Q16322 511 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 TMEM266Q2M3C6 531 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 HSDL1Q3SXM5 330 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 PPP4R3AQ6IN85 833 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 MIS18BP1Q6P0N0 1132 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 MIER3Q7Z3K6 550 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 SLFN12Q8IYM2 578 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 PCSK9Q8NBP7 692 aaKnown RBP7.19□□□□□ -1.26
VPS4B-205ENST00000591383 TTC16Q8NEE8 873 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 GLG1Q92896 1179 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 SLC5A5Q92911 643 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 CRELD1Q96HD1 420 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 PAWRQ96IZ0 340 aaKnown RBP7.19□□□□□ -1.26
VPS4B-205ENST00000591383 GLT1D1Q96MS3 346 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 MBOAT7Q96N66 472 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 GPR20Q99678 358 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 SENP7Q9BQF6 1050 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 MTG1Q9BT17 334 aaPredicted RBP7.19□□□□□ -1.26
VPS4B-205ENST00000591383 GRIP2Q9C0E4 1043 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 SENP6Q9GZR1 1112 aaPredicted RBP7.19□□□□□ -1.26
VPS4B-205ENST00000591383 ACBD3Q9H3P7 528 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 UNC45AQ9H3U1 944 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 ZSCAN16Q9H4T2 348 aaPredicted RBP7.19□□□□□ -1.26
VPS4B-205ENST00000591383 C11orf49Q9H6J7 331 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 AZI2Q9H6S1 392 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 CAPN10Q9HC96 672 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 KCNMB3Q9NPA1 279 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 STARD7Q9NQZ5 370 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 TBC1D22BQ9NU19 505 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 VAV3Q9UKW4 847 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 ZNF215Q9UL58 517 aaPredicted RBP7.19□□□□□ -1.26
VPS4B-205ENST00000591383 Q9Y3F1 56 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 TANC1Q9C0D5 1861 aa7.19□□□□□ -1.26
VPS4B-205ENST00000591383 CEP290O15078 2479 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 TBX3O15119 743 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 CTAGE5O15320 804 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 MAFGO15525 162 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 PQBP1O60828 265 aaKnown RBP7.18□□□□□ -1.26
VPS4B-205ENST00000591383 CPNE3O75131 537 aaKnown RBP7.18□□□□□ -1.26
VPS4B-205ENST00000591383 PSMD10O75832 226 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 PSAPP07602 524 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 PLA2G4AP47712 749 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 JAK3P52333 1124 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 PURAQ00577 322 aaKnown RBP7.18□□□□□ -1.26
VPS4B-205ENST00000591383 PRKCEQ02156 737 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 CYP4A11Q02928 519 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 STK38Q15208 465 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 C4orf17Q53FE4 359 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 FAM160B1Q5W0V3 765 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 ZNF746Q6NUN9 644 aaPredicted RBP7.18□□□□□ -1.26
VPS4B-205ENST00000591383 TRMT1LQ7Z2T5 733 aaKnown RBP7.18□□□□□ -1.26
VPS4B-205ENST00000591383 NECAB2Q7Z6G3 386 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 CCDC60Q8IWA6 550 aaPredicted RBP7.18□□□□□ -1.26
VPS4B-205ENST00000591383 CKAP2LQ8IYA6 745 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 SMAP1Q8IYB5 467 aaPredicted RBP7.18□□□□□ -1.26
VPS4B-205ENST00000591383 KLHDC9Q8NEP7 349 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 SNIP1Q8TAD8 396 aaKnown RBP7.18□□□□□ -1.26
VPS4B-205ENST00000591383 HAS1Q92839 578 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 FAM20AQ96MK3 541 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 CCDC43Q96MW1 224 aaKnown RBP7.18□□□□□ -1.26
VPS4B-205ENST00000591383 ZNF396Q96N95 335 aaPredicted RBP7.18□□□□□ -1.26
VPS4B-205ENST00000591383 RIT2Q99578 217 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 KATNAL1Q9BW62 490 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 DISC1Q9NRI5 854 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 CEP131Q9UPN4 1083 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 PHF24Q9UPV7 400 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 ATP11BQ9Y2G3 1177 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.18□□□□□ -1.26
VPS4B-205ENST00000591383 EMSYQ7Z589 1322 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 IGSF9BQ9UPX0 1349 aa7.18□□□□□ -1.26
VPS4B-205ENST00000591383 TNRC18O15417 2968 aaPredicted RBP7.17□□□□□ -1.26
VPS4B-205ENST00000591383 LOXHD1Q8IVV2 1947 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 A0A0U1RQG5 324 aaPredicted RBP7.17□□□□□ -1.26
VPS4B-205ENST00000591383 VWA3AA6NCI4 1184 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 TGFBR3LH3BV60 316 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 DHX15O43143 795 aaKnown RBP7.17□□□□□ -1.26
VPS4B-205ENST00000591383 KPNA6O60684 536 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 BMP15O95972 392 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 F2P00734 622 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 TIMP2P16035 220 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 EIF4BP23588 611 aaKnown RBP7.17□□□□□ -1.26
VPS4B-205ENST00000591383 SFNP31947 248 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 GPC1P35052 558 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 RTP1P59025 263 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 NUCB2P80303 420 aa7.17□□□□□ -1.26
VPS4B-205ENST00000591383 ATP2C1P98194 919 aaPredicted RBP7.17□□□□□ -1.26
VPS4B-205ENST00000591383 FOXC1Q12948 553 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms