RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 DNAJB1P25685 340 aa23.82■■□□□ 1.4
LRP3-202ENST00000590275 FXR2P51116 673 aaKnown RBP eCLIP23.82■■□□□ 1.4
LRP3-202ENST00000590275 LRRC55Q6ZSA7 311 aa23.82■■□□□ 1.4
LRP3-202ENST00000590275 PSPC1Q8WXF1 523 aaKnown RBP23.82■■□□□ 1.4
LRP3-202ENST00000590275 JPH2Q9BR39 696 aaPredicted RBP23.82■■□□□ 1.4
LRP3-202ENST00000590275 ELAC1Q9H777 363 aaKnown RBP23.82■■□□□ 1.4
LRP3-202ENST00000590275 TUFT1Q9NNX1 390 aa23.82■■□□□ 1.4
LRP3-202ENST00000590275 GPRC5CQ9NQ84 441 aa23.82■■□□□ 1.4
LRP3-202ENST00000590275 NOL7Q9UMY1 257 aaKnown RBP23.82■■□□□ 1.4
LRP3-202ENST00000590275 MEIS3P2A8K0S8 358 aa23.81■■□□□ 1.4
LRP3-202ENST00000590275 ARL2P36404 184 aa23.81■■□□□ 1.4
LRP3-202ENST00000590275 CLLU1OSQ5K130 101 aa23.81■■□□□ 1.4
LRP3-202ENST00000590275 MRPL38Q96DV4 380 aaKnown RBP23.81■■□□□ 1.4
LRP3-202ENST00000590275 CASD1Q96PB1 797 aa23.81■■□□□ 1.4
LRP3-202ENST00000590275 MTRQ99707 1265 aa23.81■■□□□ 1.4
LRP3-202ENST00000590275 CWH43Q9H720 699 aa23.81■■□□□ 1.4
LRP3-202ENST00000590275 THEGQ9P2T0 379 aa23.81■■□□□ 1.4
LRP3-202ENST00000590275 ARID2Q68CP9 1835 aa23.8■■□□□ 1.4
LRP3-202ENST00000590275 A0A0U1RQF3 1178 aa23.8■■□□□ 1.4
LRP3-202ENST00000590275 RPA1P27694 616 aa23.8■■□□□ 1.4
LRP3-202ENST00000590275 CDC25AP30304 524 aa23.8■■□□□ 1.4
LRP3-202ENST00000590275 HOXA11P31270 313 aaPredicted RBP23.8■■□□□ 1.4
LRP3-202ENST00000590275 CDC42EP1Q00587 391 aa23.8■■□□□ 1.4
LRP3-202ENST00000590275 IGSF22Q8N9C0 903 aa23.8■■□□□ 1.4
LRP3-202ENST00000590275 RNF149Q8NC42 400 aa23.8■■□□□ 1.4
LRP3-202ENST00000590275 ATP6V0A4Q9HBG4 840 aa23.8■■□□□ 1.4
LRP3-202ENST00000590275 ALG13Q9NP73 1137 aaKnown RBP23.8■■□□□ 1.4
LRP3-202ENST00000590275 TYW1Q9NV66 732 aaKnown RBP23.8■■□□□ 1.4
LRP3-202ENST00000590275 DLL1O00548 723 aa23.79■■□□□ 1.4
LRP3-202ENST00000590275 USO1O60763 962 aaKnown RBP23.79■■□□□ 1.4
LRP3-202ENST00000590275 ITGB1P05556 798 aa23.79■■□□□ 1.4
LRP3-202ENST00000590275 ZSCAN20P17040 1043 aaPredicted RBP23.79■■□□□ 1.4
LRP3-202ENST00000590275 GLRA2P23416 452 aa23.79■■□□□ 1.4
LRP3-202ENST00000590275 CAPSQ13938 189 aa23.79■■□□□ 1.4
LRP3-202ENST00000590275 SKIV2LQ15477 1246 aaKnown RBP23.79■■□□□ 1.4
LRP3-202ENST00000590275 FAM43BQ6ZT52 329 aaPredicted RBP23.79■■□□□ 1.4
LRP3-202ENST00000590275 KLHL23Q8NBE8 558 aa23.79■■□□□ 1.4
LRP3-202ENST00000590275 MMTAG2Q9BU76 263 aaKnown RBP23.79■■□□□ 1.4
LRP3-202ENST00000590275 PLAGL2Q9UPG8 496 aa23.79■■□□□ 1.4
LRP3-202ENST00000590275 MUC3AQ02505 3323 aa23.79■■□□□ 1.4
LRP3-202ENST00000590275 DGAT1O75907 488 aa23.78■■□□□ 1.4
LRP3-202ENST00000590275 CSPG5O95196 566 aa23.78■■□□□ 1.4
LRP3-202ENST00000590275 RB1P06400 928 aa23.78■■□□□ 1.4
LRP3-202ENST00000590275 XRCC6P12956 609 aaKnown RBP eCLIP23.78■■□□□ 1.4
LRP3-202ENST00000590275 LONRF3Q496Y0 759 aa23.78■■□□□ 1.4
LRP3-202ENST00000590275 UBXN11Q5T124 520 aa23.78■■□□□ 1.4
LRP3-202ENST00000590275 LARP1BQ659C4 914 aaKnown RBP23.78■■□□□ 1.4
LRP3-202ENST00000590275 MAEAQ7L5Y9 396 aa23.78■■□□□ 1.4
LRP3-202ENST00000590275 CATSPER4Q7RTX7 472 aa23.78■■□□□ 1.4
LRP3-202ENST00000590275 RNF169Q8NCN4 708 aa23.78■■□□□ 1.4
LRP3-202ENST00000590275 SPPL3Q8TCT6 385 aa23.78■■□□□ 1.4
LRP3-202ENST00000590275 LPPQ93052 612 aa23.78■■□□□ 1.4
LRP3-202ENST00000590275 POLD4Q9HCU8 107 aa23.78■■□□□ 1.4
LRP3-202ENST00000590275 AGPAT5Q9NUQ2 364 aa23.78■■□□□ 1.4
LRP3-202ENST00000590275 DBR1Q9UK59 544 aaKnown RBP23.78■■□□□ 1.4
LRP3-202ENST00000590275 PIN4Q9Y237 131 aaKnown RBP23.78■■□□□ 1.4
LRP3-202ENST00000590275 KIF3AQ9Y496 699 aa23.78■■□□□ 1.4
LRP3-202ENST00000590275 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.78■■□□□ 1.4
LRP3-202ENST00000590275 NLRC5Q86WI3 1866 aa23.77■■□□□ 1.4
LRP3-202ENST00000590275 H3BQV1 296 aa23.77■■□□□ 1.4
LRP3-202ENST00000590275 GAS2O43903 313 aaKnown RBP23.77■■□□□ 1.4
LRP3-202ENST00000590275 SFPQP23246 707 aaKnown RBP eCLIP23.77■■□□□ 1.4
LRP3-202ENST00000590275 PHKA2P46019 1235 aa23.77■■□□□ 1.4
LRP3-202ENST00000590275 PTENP60484 403 aa23.77■■□□□ 1.4
LRP3-202ENST00000590275 AMHR2Q16671 573 aa23.77■■□□□ 1.4
LRP3-202ENST00000590275 TCEAL5Q5H9L2 206 aa23.77■■□□□ 1.4
LRP3-202ENST00000590275 TCP11Q8WWU5 503 aa23.77■■□□□ 1.4
LRP3-202ENST00000590275 BSNDQ8WZ55 320 aa23.77■■□□□ 1.4
LRP3-202ENST00000590275 ASB2Q96Q27 587 aa23.77■■□□□ 1.4
LRP3-202ENST00000590275 TRAIPQ9BWF2 469 aa23.77■■□□□ 1.4
LRP3-202ENST00000590275 POLR3FQ9H1D9 316 aaPredicted RBP23.77■■□□□ 1.4
LRP3-202ENST00000590275 CHST12Q9NRB3 414 aa23.77■■□□□ 1.4
LRP3-202ENST00000590275 LRWD1Q9UFC0 647 aa23.77■■□□□ 1.4
LRP3-202ENST00000590275 PCDHGC5Q9Y5F6 944 aa23.77■■□□□ 1.4
LRP3-202ENST00000590275 KIAA1671Q9BY89 1806 aa23.77■■□□□ 1.4
LRP3-202ENST00000590275 IRS1P35568 1242 aa23.76■■□□□ 1.39
LRP3-202ENST00000590275 CCT6AP40227 531 aaKnown RBP23.76■■□□□ 1.39
LRP3-202ENST00000590275 PBX3P40426 434 aa23.76■■□□□ 1.39
LRP3-202ENST00000590275 KCNQ1P51787 676 aa23.76■■□□□ 1.39
LRP3-202ENST00000590275 ATP2C1P98194 919 aaPredicted RBP23.76■■□□□ 1.39
LRP3-202ENST00000590275 KCNK18Q7Z418 384 aa23.76■■□□□ 1.39
LRP3-202ENST00000590275 SRGAP1Q7Z6B7 1085 aa23.76■■□□□ 1.39
LRP3-202ENST00000590275 EXOC8Q8IYI6 725 aa23.76■■□□□ 1.39
LRP3-202ENST00000590275 HELQQ8TDG4 1101 aa23.76■■□□□ 1.39
LRP3-202ENST00000590275 ATXN2LQ8WWM7 1075 aaKnown RBP23.76■■□□□ 1.39
LRP3-202ENST00000590275 NACC1Q96RE7 527 aa23.76■■□□□ 1.39
LRP3-202ENST00000590275 C11orf84Q9BUA3 381 aaPredicted RBP23.76■■□□□ 1.39
LRP3-202ENST00000590275 TMEM117Q9H0C3 514 aa23.76■■□□□ 1.39
LRP3-202ENST00000590275 RALGAPA2Q2PPJ7 1873 aa23.76■■□□□ 1.39
LRP3-202ENST00000590275 FNDC1Q4ZHG4 1894 aaPredicted RBP23.75■■□□□ 1.39
LRP3-202ENST00000590275 PDIA5Q14554 519 aa23.75■■□□□ 1.39
LRP3-202ENST00000590275 RILPL1Q5EBL4 403 aa23.75■■□□□ 1.39
LRP3-202ENST00000590275 IFNLR1Q8IU57 520 aaPredicted RBP23.75■■□□□ 1.39
LRP3-202ENST00000590275 P2RX5Q93086 422 aa23.75■■□□□ 1.39
LRP3-202ENST00000590275 PLVAPQ9BX97 442 aa23.75■■□□□ 1.39
LRP3-202ENST00000590275 INO80BQ9C086 356 aaPredicted RBP23.75■■□□□ 1.39
LRP3-202ENST00000590275 FAM105AQ9NUU6 356 aa23.75■■□□□ 1.39
LRP3-202ENST00000590275 RWDD3Q9Y3V2 267 aa23.75■■□□□ 1.39
LRP3-202ENST00000590275 ASAP2O43150 1006 aa23.74■■□□□ 1.39
LRP3-202ENST00000590275 TSPAN1O60635 241 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms