RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 CASP1P29466 404 aa15.06■□□□□ 0
VMP1-210ENST00000589823 NAMPTP43490 491 aa15.06■□□□□ 0
VMP1-210ENST00000589823 SMTNP53814 917 aa15.06■□□□□ 0
VMP1-210ENST00000589823 PEX3P56589 373 aa15.06■□□□□ 0
VMP1-210ENST00000589823 CAPSQ13938 189 aa15.06■□□□□ 0
VMP1-210ENST00000589823 FAM26DQ5JW98 314 aa15.06■□□□□ 0
VMP1-210ENST00000589823 ODR4Q5SWX8 454 aa15.06■□□□□ 0
VMP1-210ENST00000589823 LRRC8DQ7L1W4 858 aa15.06■□□□□ 0
VMP1-210ENST00000589823 KSR1Q8IVT5 923 aa15.06■□□□□ 0
VMP1-210ENST00000589823 RNF149Q8NC42 400 aa15.06■□□□□ 0
VMP1-210ENST00000589823 ZNF668Q96K58 619 aaPredicted RBP15.06■□□□□ 0
VMP1-210ENST00000589823 CELF4Q9BZC1 486 aaKnown RBP15.06■□□□□ 0
VMP1-210ENST00000589823 PANK4Q9NVE7 773 aa15.06■□□□□ 0
VMP1-210ENST00000589823 SEL1LQ9UBV2 794 aa15.06■□□□□ 0
VMP1-210ENST00000589823 EVPLQ92817 2033 aa15.05■□□□□ 0
VMP1-210ENST00000589823 A0A087WZ62 844 aa15.05■□□□□ -0
VMP1-210ENST00000589823 PVALEFA0A1B0GWK0 134 aa15.05■□□□□ -0
VMP1-210ENST00000589823 TRIM43BA6NCK2 446 aa15.05■□□□□ -0
VMP1-210ENST00000589823 CCDC169A6NNP5 214 aa15.05■□□□□ -0
VMP1-210ENST00000589823 GPR32O75388 356 aa15.05■□□□□ -0
VMP1-210ENST00000589823 CAPN15O75808 1086 aa15.05■□□□□ -0
VMP1-210ENST00000589823 SMC2O95347 1197 aa15.05■□□□□ -0
VMP1-210ENST00000589823 PRR29P0C7W0 189 aa15.05■□□□□ -0
VMP1-210ENST00000589823 RAG1P15918 1043 aa15.05■□□□□ -0
VMP1-210ENST00000589823 PHKA2P46019 1235 aa15.05■□□□□ -0
VMP1-210ENST00000589823 ZNF131P52739 623 aa15.05■□□□□ -0
VMP1-210ENST00000589823 CRYBB1P53674 252 aaPredicted RBP15.05■□□□□ -0
VMP1-210ENST00000589823 POU5F1BQ06416 359 aa15.05■□□□□ -0
VMP1-210ENST00000589823 MGAT3Q09327 533 aa15.05■□□□□ -0
VMP1-210ENST00000589823 HERC4Q5GLZ8 1057 aaPredicted RBP15.05■□□□□ -0
VMP1-210ENST00000589823 UNC13DQ70J99 1090 aa15.05■□□□□ -0
VMP1-210ENST00000589823 ZBTB8OSQ8IWT0 167 aa15.05■□□□□ -0
VMP1-210ENST00000589823 DEPTORQ8TB45 409 aa15.05■□□□□ -0
VMP1-210ENST00000589823 BSNDQ8WZ55 320 aa15.05■□□□□ -0
VMP1-210ENST00000589823 TRIM43Q96BQ3 446 aaPredicted RBP15.05■□□□□ -0
VMP1-210ENST00000589823 OSMRQ99650 979 aa15.05■□□□□ -0
VMP1-210ENST00000589823 FDXACB1Q9BRP7 624 aaPredicted RBP15.05■□□□□ -0
VMP1-210ENST00000589823 GCOM2Q9BZD3 368 aaPredicted RBP15.05■□□□□ -0
VMP1-210ENST00000589823 INO80BQ9C086 356 aaPredicted RBP15.05■□□□□ -0
VMP1-210ENST00000589823 C2orf40Q9H1Z8 148 aa15.05■□□□□ -0
VMP1-210ENST00000589823 ADAMTS10Q9H324 1103 aa15.05■□□□□ -0
VMP1-210ENST00000589823 CLSTN2Q9H4D0 955 aa15.05■□□□□ -0
VMP1-210ENST00000589823 KMT5AQ9NQR1 393 aa15.05■□□□□ -0
VMP1-210ENST00000589823 NR2E3Q9Y5X4 410 aa15.05■□□□□ -0
VMP1-210ENST00000589823 PARNO95453 639 aaKnown RBP15.04■□□□□ -0
VMP1-210ENST00000589823 TIMP1P01033 207 aa15.04■□□□□ -0
VMP1-210ENST00000589823 CHRNA1P02708 482 aa15.04■□□□□ -0
VMP1-210ENST00000589823 RPN1P04843 607 aaKnown RBP15.04■□□□□ -0
VMP1-210ENST00000589823 CYP2C18P33260 490 aa15.04■□□□□ -0
VMP1-210ENST00000589823 NPTX2P47972 431 aa15.04■□□□□ -0
VMP1-210ENST00000589823 CCL23P55773 120 aa15.04■□□□□ -0
VMP1-210ENST00000589823 MDM2Q00987 491 aaPredicted RBP15.04■□□□□ -0
VMP1-210ENST00000589823 DPYDQ12882 1025 aa15.04■□□□□ -0
VMP1-210ENST00000589823 COASYQ13057 564 aa15.04■□□□□ -0
VMP1-210ENST00000589823 PNOCQ13519 176 aa15.04■□□□□ -0
VMP1-210ENST00000589823 SRGAP1Q7Z6B7 1085 aa15.04■□□□□ -0
VMP1-210ENST00000589823 SFR1Q86XK3 245 aa15.04■□□□□ -0
VMP1-210ENST00000589823 FAM178BQ8IXR5 827 aa15.04■□□□□ -0
VMP1-210ENST00000589823 SLC17A8Q8NDX2 589 aa15.04■□□□□ -0
VMP1-210ENST00000589823 SPIRE2Q8WWL2 714 aa15.04■□□□□ -0
VMP1-210ENST00000589823 NUP62CLQ9H1M0 184 aa15.04■□□□□ -0
VMP1-210ENST00000589823 EXOC1Q9NV70 894 aa15.04■□□□□ -0
VMP1-210ENST00000589823 UMODL1Q5DID0 1318 aa15.03■□□□□ -0
VMP1-210ENST00000589823 PHLPP2Q6ZVD8 1323 aa15.03■□□□□ -0
VMP1-210ENST00000589823 FRMD3A2A2Y4 597 aa15.03■□□□□ -0
VMP1-210ENST00000589823 H0YCG3 227 aa15.03■□□□□ -0
VMP1-210ENST00000589823 TRAK2O60296 914 aa15.03■□□□□ -0
VMP1-210ENST00000589823 IQCF3P0C7M6 154 aa15.03■□□□□ -0
VMP1-210ENST00000589823 DARSP14868 501 aaKnown RBP15.03■□□□□ -0
VMP1-210ENST00000589823 PTENP60484 403 aa15.03■□□□□ -0
VMP1-210ENST00000589823 NFKBIBQ15653 356 aa15.03■□□□□ -0
VMP1-210ENST00000589823 CAMK4Q16566 473 aa15.03■□□□□ -0
VMP1-210ENST00000589823 SKOR2Q2VWA4 1001 aaPredicted RBP15.03■□□□□ -0
VMP1-210ENST00000589823 TMEM199Q8N511 208 aa15.03■□□□□ -0
VMP1-210ENST00000589823 USP38Q8NB14 1042 aa15.03■□□□□ -0
VMP1-210ENST00000589823 SMARCE1Q969G3 411 aa15.03■□□□□ -0
VMP1-210ENST00000589823 NFKBIZQ9BYH8 718 aa15.03■□□□□ -0
VMP1-210ENST00000589823 MRPL44Q9H9J2 332 aaKnown RBP15.03■□□□□ -0
VMP1-210ENST00000589823 CDHR5Q9HBB8 845 aa15.03■□□□□ -0
VMP1-210ENST00000589823 RMND1Q9NWS8 449 aa15.03■□□□□ -0
VMP1-210ENST00000589823 MKI67P46013 3256 aaKnown RBP15.02■□□□□ -0
VMP1-210ENST00000589823 ALPK3Q96L96 1907 aa15.02■□□□□ -0
VMP1-210ENST00000589823 INO80B-WBP1J3KQ70 363 aa15.02■□□□□ -0
VMP1-210ENST00000589823 K7ENM7 598 aa15.02■□□□□ -0
VMP1-210ENST00000589823 SLC16A4O15374 487 aa15.02■□□□□ -0
VMP1-210ENST00000589823 KLRC4O43908 158 aa15.02■□□□□ -0
VMP1-210ENST00000589823 RPS6KA5O75582 802 aa15.02■□□□□ -0
VMP1-210ENST00000589823 MAPTP10636 758 aaKnown RBP15.02■□□□□ -0
VMP1-210ENST00000589823 GHRP10912 638 aa15.02■□□□□ -0
VMP1-210ENST00000589823 SCP2P22307 547 aa15.02■□□□□ -0
VMP1-210ENST00000589823 EIF4BP23588 611 aaKnown RBP15.02■□□□□ -0
VMP1-210ENST00000589823 ABCD1P33897 745 aa15.02■□□□□ -0
VMP1-210ENST00000589823 RFC2P35250 354 aa15.02■□□□□ -0
VMP1-210ENST00000589823 EFNA5P52803 228 aa15.02■□□□□ -0
VMP1-210ENST00000589823 NCKAP1LP55160 1127 aa15.02■□□□□ -0
VMP1-210ENST00000589823 KMT5BQ4FZB7 885 aa15.02■□□□□ -0
VMP1-210ENST00000589823 FBXO47Q5MNV8 452 aa15.02■□□□□ -0
VMP1-210ENST00000589823 CDCA2Q69YH5 1023 aaPredicted RBP15.02■□□□□ -0
VMP1-210ENST00000589823 TRAF7Q6Q0C0 670 aa15.02■□□□□ -0
VMP1-210ENST00000589823 IFNLR1Q8IU57 520 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms