RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 GPRC5CQ9NQ84 441 aa11.23□□□□□ -0.61
APOC1-205ENST00000589781 ZNF302Q9NR11 478 aa11.23□□□□□ -0.61
APOC1-205ENST00000589781 ANKEF1Q9NU02 776 aa11.23□□□□□ -0.61
APOC1-205ENST00000589781 KCND2Q9NZV8 630 aa11.23□□□□□ -0.61
APOC1-205ENST00000589781 MAGEC2Q9UBF1 373 aaPredicted RBP11.23□□□□□ -0.61
APOC1-205ENST00000589781 ZKSCAN5Q9Y2L8 839 aa11.23□□□□□ -0.61
APOC1-205ENST00000589781 Q9Y3F1 56 aa11.23□□□□□ -0.61
APOC1-205ENST00000589781 GSTTP1A0A1W2PQM5 241 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 KIAA0355O15063 1070 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 PQBP1O60828 265 aaKnown RBP11.22□□□□□ -0.61
APOC1-205ENST00000589781 DKC1O60832 514 aaKnown RBP eCLIP11.22□□□□□ -0.61
APOC1-205ENST00000589781 UBE4BO95155 1302 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 KIF20AO95235 890 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 ATG7O95352 703 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 CD4P01730 458 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 EEF1GP26641 437 aaKnown RBP11.22□□□□□ -0.61
APOC1-205ENST00000589781 HOXD13P35453 343 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 PURAQ00577 322 aaKnown RBP11.22□□□□□ -0.61
APOC1-205ENST00000589781 GOLGA8FQ08AF8 430 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 GOLGA8DPQ0D2H9 430 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 LRMPQ12912 555 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 MTERF2Q49AM1 385 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 ODR4Q5SWX8 454 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 KSR1Q8IVT5 923 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 FAM114A1Q8IWE2 563 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 FAM126BQ8IXS8 530 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 BADQ92934 168 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 CTAGE1Q96RT6 745 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 KCTD10Q9H3F6 313 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 RTN4Q9NQC3 1192 aaKnown RBP11.22□□□□□ -0.61
APOC1-205ENST00000589781 RRAGDQ9NQL2 400 aaPredicted RBP11.22□□□□□ -0.61
APOC1-205ENST00000589781 STARD7Q9NQZ5 370 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 OLFML3Q9NRN5 406 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 SEL1LQ9UBV2 794 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 DDX41Q9UJV9 622 aaKnown RBP11.22□□□□□ -0.61
APOC1-205ENST00000589781 TBX21Q9UL17 535 aa11.22□□□□□ -0.61
APOC1-205ENST00000589781 UMODL1Q5DID0 1318 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 A6NJR5 290 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 LGALS16A8MUM7 142 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 ARVCFO00192 962 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 N4BP3O15049 544 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 NKRFO15226 690 aaKnown RBP eCLIP11.21□□□□□ -0.61
APOC1-205ENST00000589781 EIF3DO15371 548 aaKnown RBP eCLIP11.21□□□□□ -0.612e-6■□□□□ 9.1
APOC1-205ENST00000589781 OATP04181 439 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 TXNP10599 105 aaKnown RBP11.21□□□□□ -0.61
APOC1-205ENST00000589781 PRKCSHP14314 528 aaPredicted RBP11.21□□□□□ -0.61
APOC1-205ENST00000589781 ATP4AP20648 1035 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 MSNP26038 577 aaKnown RBP11.21□□□□□ -0.61
APOC1-205ENST00000589781 PBX1P40424 430 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 MTIF2P46199 727 aaKnown RBP11.21□□□□□ -0.61
APOC1-205ENST00000589781 KCNA1Q09470 495 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 BMT2Q1RMZ1 405 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 FILIP1LQ4L180 1135 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 ZC2HC1CQ53FD0 456 aaPredicted RBP11.21□□□□□ -0.61
APOC1-205ENST00000589781 C9orf50Q5SZB4 431 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 CELF3Q5SZQ8 465 aaKnown RBP11.21□□□□□ -0.61
APOC1-205ENST00000589781 FAM102BQ5T8I3 360 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 METTL7BQ6UX53 244 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 C16orf59Q7L2K0 433 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 FAM178BQ8IXR5 827 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 PCSK9Q8NBP7 692 aaKnown RBP11.21□□□□□ -0.61
APOC1-205ENST00000589781 SCFD2Q8WU76 684 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 CACTINQ8WUQ7 758 aaKnown RBP11.21□□□□□ -0.61
APOC1-205ENST00000589781 KAT2BQ92831 832 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 LRCH3Q96II8 777 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 CEP170P1Q96L14 293 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 TOX2Q96NM4 488 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 IKZF4Q9H2S9 585 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 MLXIPQ9HAP2 919 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 IMPACTQ9P2X3 320 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 PYCARDQ9ULZ3 195 aa11.21□□□□□ -0.61
APOC1-205ENST00000589781 IGKV6D-21A0A0A0MT36 114 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 PES1O00541 588 aaKnown RBP11.2□□□□□ -0.62
APOC1-205ENST00000589781 CLTBP09497 229 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 TGFB3P10600 412 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 PLS3P13797 630 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 MARK3P27448 753 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 TCF7P36402 384 aaPredicted RBP11.2□□□□□ -0.62
APOC1-205ENST00000589781 GSDMDP57764 484 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 TTLL4Q14679 1199 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 NR1I3Q14994 352 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 KNOP1Q1ED39 458 aaKnown RBP11.2□□□□□ -0.62
APOC1-205ENST00000589781 CCDC40Q4G0X9 1142 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 XKR3Q5GH77 459 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 FAM160B1Q5W0V3 765 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 ARMCX5Q6P1M9 558 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 KCNV1Q6PIU1 500 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 FOXR2Q6PJQ5 311 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 OTUD6AQ7L8S5 288 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 TRIM50Q86XT4 487 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 ZC3H3Q8IXZ2 948 aaKnown RBP11.2□□□□□ -0.62
APOC1-205ENST00000589781 DHX37Q8IY37 1157 aaKnown RBP11.2□□□□□ -0.62
APOC1-205ENST00000589781 CCDC150Q8NCX0 1101 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 OR6J1Q8NGC5 347 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 BSNDQ8WZ55 320 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 DRC1Q96MC2 740 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 GLT1D1Q96MS3 346 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 SPATA33Q96N06 139 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 GPR20Q99678 358 aa11.2□□□□□ -0.62
APOC1-205ENST00000589781 TUBGCP2Q9BSJ2 902 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms