RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 SEL1LQ9UBV2 794 aa16.78■□□□□ 0.28
ATG4D-211ENST00000589753 KCNG1Q9UIX4 513 aa16.78■□□□□ 0.28
ATG4D-211ENST00000589753 EVPLQ92817 2033 aa16.78■□□□□ 0.28
ATG4D-211ENST00000589753 LRRIQ4A6NIV6 560 aa16.77■□□□□ 0.28
ATG4D-211ENST00000589753 CCDC169A6NNP5 214 aa16.77■□□□□ 0.28
ATG4D-211ENST00000589753 M0QZ92 97 aa16.77■□□□□ 0.28
ATG4D-211ENST00000589753 CAND2O75155 1236 aa16.77■□□□□ 0.28
ATG4D-211ENST00000589753 SRGAP2CP0DJJ0 459 aa16.77■□□□□ 0.28
ATG4D-211ENST00000589753 NAMPTP43490 491 aa16.77■□□□□ 0.28
ATG4D-211ENST00000589753 NPTX2P47972 431 aa16.77■□□□□ 0.28
ATG4D-211ENST00000589753 SARSP49591 514 aaKnown RBP16.77■□□□□ 0.28
ATG4D-211ENST00000589753 GPC3P51654 580 aa16.77■□□□□ 0.28
ATG4D-211ENST00000589753 SMTNP53814 917 aa16.77■□□□□ 0.28
ATG4D-211ENST00000589753 NLRP11P59045 1033 aaKnown RBP16.77■□□□□ 0.28
ATG4D-211ENST00000589753 MRPS6P82932 125 aaKnown RBP16.77■□□□□ 0.28
ATG4D-211ENST00000589753 BFSP2Q13515 415 aa16.77■□□□□ 0.28
ATG4D-211ENST00000589753 CAPSQ13938 189 aa16.77■□□□□ 0.28
ATG4D-211ENST00000589753 KCNB1Q14721 858 aa16.77■□□□□ 0.28
ATG4D-211ENST00000589753 RNF149Q8NC42 400 aa16.77■□□□□ 0.28
ATG4D-211ENST00000589753 CAGE1Q8TC20 777 aa16.77■□□□□ 0.28
ATG4D-211ENST00000589753 SPIRE2Q8WWL2 714 aa16.77■□□□□ 0.28
ATG4D-211ENST00000589753 SCLT1Q96NL6 688 aa16.77■□□□□ 0.28
ATG4D-211ENST00000589753 PPP1R16BQ96T49 567 aa16.77■□□□□ 0.28
ATG4D-211ENST00000589753 KMT5AQ9NQR1 393 aa16.77■□□□□ 0.28
ATG4D-211ENST00000589753 KIAA1468Q9P260 1216 aa16.77■□□□□ 0.28
ATG4D-211ENST00000589753 GPR32O75388 356 aa16.76■□□□□ 0.27
ATG4D-211ENST00000589753 RHOBTB3O94955 611 aa16.76■□□□□ 0.27
ATG4D-211ENST00000589753 CLTBP09497 229 aa16.76■□□□□ 0.27
ATG4D-211ENST00000589753 CKBP12277 381 aa16.76■□□□□ 0.27
ATG4D-211ENST00000589753 POU5F1BQ06416 359 aa16.76■□□□□ 0.27
ATG4D-211ENST00000589753 EHHADHQ08426 723 aa16.76■□□□□ 0.27
ATG4D-211ENST00000589753 RBL2Q08999 1139 aa16.76■□□□□ 0.27
ATG4D-211ENST00000589753 PSMD2Q13200 908 aa16.76■□□□□ 0.27
ATG4D-211ENST00000589753 KIZQ2M2Z5 673 aa16.76■□□□□ 0.27
ATG4D-211ENST00000589753 NT5DC1Q5TFE4 455 aa16.76■□□□□ 0.27
ATG4D-211ENST00000589753 RBM43Q6ZSC3 357 aaKnown RBP16.76■□□□□ 0.27
ATG4D-211ENST00000589753 ZNF410Q86VK4 478 aa16.76■□□□□ 0.27
ATG4D-211ENST00000589753 FAM178BQ8IXR5 827 aa16.76■□□□□ 0.27
ATG4D-211ENST00000589753 SLC17A8Q8NDX2 589 aa16.76■□□□□ 0.27
ATG4D-211ENST00000589753 DEPTORQ8TB45 409 aa16.76■□□□□ 0.27
ATG4D-211ENST00000589753 NLRP7Q8WX94 980 aa16.76■□□□□ 0.27
ATG4D-211ENST00000589753 ZNF668Q96K58 619 aaPredicted RBP16.76■□□□□ 0.27
ATG4D-211ENST00000589753 NTPCRQ9BSD7 190 aaKnown RBP16.76■□□□□ 0.27
ATG4D-211ENST00000589753 CELF4Q9BZC1 486 aaKnown RBP16.76■□□□□ 0.27
ATG4D-211ENST00000589753 ADAMTS10Q9H324 1103 aa16.76■□□□□ 0.27
ATG4D-211ENST00000589753 OLFML3Q9NRN5 406 aa16.76■□□□□ 0.27
ATG4D-211ENST00000589753 TBC1D7Q9P0N9 293 aa16.76■□□□□ 0.27
ATG4D-211ENST00000589753 TRPV2Q9Y5S1 764 aa16.76■□□□□ 0.27
ATG4D-211ENST00000589753 MYH11P35749 1972 aa16.75■□□□□ 0.27
ATG4D-211ENST00000589753 A0A087WZ62 844 aa16.75■□□□□ 0.27
ATG4D-211ENST00000589753 H0YCG3 227 aa16.75■□□□□ 0.27
ATG4D-211ENST00000589753 SLC16A4O15374 487 aa16.75■□□□□ 0.27
ATG4D-211ENST00000589753 CTSHP09668 335 aa16.75■□□□□ 0.27
ATG4D-211ENST00000589753 MAPTP10636 758 aaKnown RBP16.75■□□□□ 0.27
ATG4D-211ENST00000589753 PHKA2P46019 1235 aa16.75■□□□□ 0.27
ATG4D-211ENST00000589753 NCKAP1LP55160 1127 aa16.75■□□□□ 0.27
ATG4D-211ENST00000589753 FAM26FQ5R3K3 315 aa16.75■□□□□ 0.27
ATG4D-211ENST00000589753 ZNF618Q5T7W0 954 aa16.75■□□□□ 0.27
ATG4D-211ENST00000589753 ZBTB8OSQ8IWT0 167 aa16.75■□□□□ 0.27
ATG4D-211ENST00000589753 HPS3Q969F9 1004 aa16.75■□□□□ 0.27
ATG4D-211ENST00000589753 FDXACB1Q9BRP7 624 aaPredicted RBP16.75■□□□□ 0.27
ATG4D-211ENST00000589753 HTATIP2Q9BUP3 242 aa16.75■□□□□ 0.27
ATG4D-211ENST00000589753 NOC4LQ9BVI4 516 aaKnown RBP16.75■□□□□ 0.27
ATG4D-211ENST00000589753 MRPL44Q9H9J2 332 aaKnown RBP16.75■□□□□ 0.27
ATG4D-211ENST00000589753 TMEM39AQ9NV64 488 aa16.75■□□□□ 0.27
ATG4D-211ENST00000589753 MAN1B1Q9UKM7 699 aa16.75■□□□□ 0.27
ATG4D-211ENST00000589753 GINS2Q9Y248 185 aa16.75■□□□□ 0.27
ATG4D-211ENST00000589753 CDY2AQ9Y6F7 541 aa16.75■□□□□ 0.27
ATG4D-211ENST00000589753 K7ENM7 598 aa16.74■□□□□ 0.27
ATG4D-211ENST00000589753 PITPNM1O00562 1244 aa16.74■□□□□ 0.27
ATG4D-211ENST00000589753 CHRNA1P02708 482 aa16.74■□□□□ 0.27
ATG4D-211ENST00000589753 NMT1P30419 496 aaKnown RBP16.74■□□□□ 0.27
ATG4D-211ENST00000589753 CRYBB1P53674 252 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-211ENST00000589753 PTENP60484 403 aa16.74■□□□□ 0.27
ATG4D-211ENST00000589753 MGAT3Q09327 533 aa16.74■□□□□ 0.27
ATG4D-211ENST00000589753 FAM26DQ5JW98 314 aa16.74■□□□□ 0.27
ATG4D-211ENST00000589753 CDCA2Q69YH5 1023 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-211ENST00000589753 HAUS6Q7Z4H7 955 aa16.74■□□□□ 0.27
ATG4D-211ENST00000589753 FIZ1Q96SL8 496 aa16.74■□□□□ 0.27
ATG4D-211ENST00000589753 OSMRQ99650 979 aa16.74■□□□□ 0.27
ATG4D-211ENST00000589753 KIFC3Q9BVG8 833 aa16.74■□□□□ 0.27
ATG4D-211ENST00000589753 NFKBIZQ9BYH8 718 aa16.74■□□□□ 0.27
ATG4D-211ENST00000589753 GCOM2Q9BZD3 368 aaPredicted RBP16.74■□□□□ 0.27
ATG4D-211ENST00000589753 C2orf40Q9H1Z8 148 aa16.74■□□□□ 0.27
ATG4D-211ENST00000589753 HIPK3Q9H422 1215 aa16.74■□□□□ 0.27
ATG4D-211ENST00000589753 CDHR5Q9HBB8 845 aa16.74■□□□□ 0.27
ATG4D-211ENST00000589753 IFT122Q9HBG6 1241 aa16.74■□□□□ 0.27
ATG4D-211ENST00000589753 SLC39A2Q9NP94 309 aa16.74■□□□□ 0.27
ATG4D-211ENST00000589753 TBX21Q9UL17 535 aa16.74■□□□□ 0.27
ATG4D-211ENST00000589753 ADGRA3Q8IWK6 1321 aa16.73■□□□□ 0.27
ATG4D-211ENST00000589753 BIN1O00499 593 aa16.73■□□□□ 0.27
ATG4D-211ENST00000589753 LETM1O95202 739 aaPredicted RBP16.73■□□□□ 0.27
ATG4D-211ENST00000589753 GCNT3O95395 438 aa16.73■□□□□ 0.27
ATG4D-211ENST00000589753 SELPP16109 830 aa16.73■□□□□ 0.27
ATG4D-211ENST00000589753 SCP2P22307 547 aa16.73■□□□□ 0.27
ATG4D-211ENST00000589753 EFNA5P52803 228 aa16.73■□□□□ 0.27
ATG4D-211ENST00000589753 STK4Q13043 487 aa16.73■□□□□ 0.27
ATG4D-211ENST00000589753 ZNF658Q5TYW1 1059 aaPredicted RBP16.73■□□□□ 0.27
ATG4D-211ENST00000589753 ISM2Q6H9L7 571 aa16.73■□□□□ 0.27
ATG4D-211ENST00000589753 STXBP4Q6ZWJ1 553 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms