RNA–Protein interactions for RNA: ENST00000589697.1

RAB8A-205, Transcript of RAB8A, member RAS oncogene family, human

TSL 1 (best)

Gene RAB8A, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB8A-205	ENST00000589697	TAPT1	Q6NXT6	567 aa		14.02	□□□□□ -0.16
RAB8A-205	ENST00000589697	CYP26C1	Q6V0L0	522 aa		14.02	□□□□□ -0.16
RAB8A-205	ENST00000589697	TMTC1	Q8IUR5	882 aa		14.02	□□□□□ -0.16
RAB8A-205	ENST00000589697	MAP4K3	Q8IVH8	894 aa		14.02	□□□□□ -0.16
RAB8A-205	ENST00000589697	C12orf56	Q8IXR9	622 aa		14.02	□□□□□ -0.16
RAB8A-205	ENST00000589697	MSL3	Q8N5Y2	521 aa	Known RBP	14.02	□□□□□ -0.16
RAB8A-205	ENST00000589697	SMC1B	Q8NDV3	1235 aa		14.02	□□□□□ -0.16
RAB8A-205	ENST00000589697	NEK11	Q8NG66	645 aa		14.02	□□□□□ -0.16
RAB8A-205	ENST00000589697	TMEM174	Q8WUU8	243 aa		14.02	□□□□□ -0.16
RAB8A-205	ENST00000589697	COPS5	Q92905	334 aa		14.02	□□□□□ -0.16
RAB8A-205	ENST00000589697	SMARCAD1	Q9H4L7	1026 aa		14.02	□□□□□ -0.16
RAB8A-205	ENST00000589697	MMRN2	Q9H8L6	949 aa		14.02	□□□□□ -0.16
RAB8A-205	ENST00000589697	FAM207A	Q9NSI2	230 aa	Predicted RBP	14.02	□□□□□ -0.16
RAB8A-205	ENST00000589697	TRMT1	Q9NXH9	659 aa	Known RBP	14.02	□□□□□ -0.16
RAB8A-205	ENST00000589697	ABT1	Q9ULW3	272 aa	Known RBP	14.02	□□□□□ -0.16
RAB8A-205	ENST00000589697	TBX20	Q9UMR3	447 aa		14.02	□□□□□ -0.16
RAB8A-205	ENST00000589697	RNF225	M0QZC1	329 aa	Predicted RBP	14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	ZSCAN12	O43309	604 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	EXOC3	O60645	756 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	MARK3	P27448	753 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	ARHGAP1	Q07960	439 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	TARBP2	Q15633	366 aa	Known RBP	14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	TCERG1L	Q5VWI1	586 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	TRIM50	Q86XT4	487 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	EXOC8	Q8IYI6	725 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	ATP8B4	Q8TF62	1192 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	C16orf45	Q96MC5	204 aa	Predicted RBP	14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	TINF2	Q9BSI4	451 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	KIFC3	Q9BVG8	833 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	ZNHIT6	Q9NWK9	470 aa	Known RBP	14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	SOWAHD	A6NJG2	315 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	RASSF10	A6NK89	507 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	GAS2	O43903	313 aa	Known RBP	14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	TLR2	O60603	784 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	SNAI1	O95863	264 aa	Predicted RBP	14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	PPTC7	Q8NI37	304 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	SLC35C1	Q96A29	364 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	EMID1	Q96A84	441 aa	Predicted RBP	14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	PPP1R13B	Q96KQ4	1090 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	CEP89	Q96ST8	783 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	KATNBL1	Q9H079	304 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	ABHD16B	Q9H3Z7	469 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	ZFYVE28	Q9HCC9	887 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	ARHGAP28	Q9P2N2	729 aa		14.01	□□□□□ -0.17
RAB8A-205	ENST00000589697	FAM155A	B1AL88	458 aa	Predicted RBP	14	□□□□□ -0.17
RAB8A-205	ENST00000589697	NAMPT	P43490	491 aa		14	□□□□□ -0.17
RAB8A-205	ENST00000589697	MAP2K5	Q13163	448 aa		14	□□□□□ -0.17
RAB8A-205	ENST00000589697	MORN1	Q5T089	497 aa		14	□□□□□ -0.17
RAB8A-205	ENST00000589697	C17orf99	Q6UX52	265 aa		14	□□□□□ -0.17
RAB8A-205	ENST00000589697	CCDC155	Q8N6L0	562 aa		14	□□□□□ -0.17
RAB8A-205	ENST00000589697	NPLOC4	Q8TAT6	608 aa		14	□□□□□ -0.17
RAB8A-205	ENST00000589697	TMEM143	Q96AN5	459 aa		14	□□□□□ -0.17
RAB8A-205	ENST00000589697	BORCS6	Q96GS4	357 aa		14	□□□□□ -0.17
RAB8A-205	ENST00000589697	HHIPL1	Q96JK4	782 aa		14	□□□□□ -0.17
RAB8A-205	ENST00000589697	LSM14B	Q9BX40	385 aa	Known RBP	14	□□□□□ -0.17
RAB8A-205	ENST00000589697	EDEM3	Q9BZQ6	932 aa		14	□□□□□ -0.17
RAB8A-205	ENST00000589697	AGPAT5	Q9NUQ2	364 aa		14	□□□□□ -0.17
RAB8A-205	ENST00000589697	TRPC6	Q9Y210	931 aa		14	□□□□□ -0.17
RAB8A-205	ENST00000589697	PPP2R2C	Q9Y2T4	447 aa		14	□□□□□ -0.17
RAB8A-205	ENST00000589697	ADGRA3	Q8IWK6	1321 aa		14	□□□□□ -0.17
RAB8A-205	ENST00000589697	GOLGA6L9	A6NEM1	432 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	MAF	O75444	373 aa	Predicted RBP	13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	KRT13	P13646	458 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	ARL2	P36404	184 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	ADCYAP1R1	P41586	468 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	PLCB4	Q15147	1175 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	PTPN14	Q15678	1187 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	MEA1	Q16626	185 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	TMEM63B	Q5T3F8	832 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	TOGARAM2	Q6ZUX3	1019 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	CACNA2D4	Q7Z3S7	1137 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	XXYLT1	Q8NBI6	393 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	JPH2	Q9BR39	696 aa	Predicted RBP	13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	CBWD1	Q9BRT8	395 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	ERAP1	Q9NZ08	941 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	HSPBP1	Q9NZL4	362 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	CEP72	Q9P209	647 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	GTPBP10	A4D1E9	387 aa	Known RBP	13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	LRRIQ4	A6NIV6	560 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	TMEM88B	A6NKF7	163 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	TISP43	B9A030	160 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	KIF2A	O00139	706 aa	Predicted RBP	13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	HNRNPDL	O14979	420 aa	Known RBP	13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	EPHB6	O15197	1021 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	MAPK13	O15264	365 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	HBP1	O60381	514 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	CCDC175	P0C221	793 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	GLRA2	P23416	452 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	KCNMA1	Q12791	1236 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	BFSP1	Q12934	665 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	STRN3	Q13033	797 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	IRF5	Q13568	498 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	ACVR2B	Q13705	512 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	EXOC3L4	Q17RC7	722 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	GJC2	Q5T442	439 aa	Predicted RBP	13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	RAD9B	Q6WBX8	426 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	NYAP1	Q6ZVC0	841 aa		13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	INTS8	Q75QN2	995 aa	Known RBP	13.99	□□□□□ -0.17
RAB8A-205	ENST00000589697	DEPTOR	Q8TB45	409 aa		13.99	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms