RNA–Protein interactions for RNA: ENST00000589057.5

APOC4-APOC2-202, Transcript of APOC4-APOC2 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene APOC4-APOC2, Length 680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2-202ENST00000589057 EDAQ92838 391 aa12.46□□□□□ -0.41
APOC4-APOC2-202ENST00000589057 FDXACB1Q9BRP7 624 aaPredicted RBP12.46□□□□□ -0.41
APOC4-APOC2-202ENST00000589057 PHF7Q9BWX1 381 aaPredicted RBP12.46□□□□□ -0.41
APOC4-APOC2-202ENST00000589057 GCOM2Q9BZD3 368 aaPredicted RBP12.46□□□□□ -0.41
APOC4-APOC2-202ENST00000589057 S1PR5Q9H228 398 aa12.46□□□□□ -0.41
APOC4-APOC2-202ENST00000589057 ENTPD7Q9NQZ7 604 aa12.46□□□□□ -0.41
APOC4-APOC2-202ENST00000589057 SPG21Q9NZD8 308 aa12.46□□□□□ -0.41
APOC4-APOC2-202ENST00000589057 DDX25Q9UHL0 483 aaKnown RBP12.46□□□□□ -0.41
APOC4-APOC2-202ENST00000589057 PUF60Q9UHX1 559 aaKnown RBP12.46□□□□□ -0.41
APOC4-APOC2-202ENST00000589057 KCNJ14Q9UNX9 436 aa12.46□□□□□ -0.41
APOC4-APOC2-202ENST00000589057 DDX11L8A8MPP1 907 aa12.45□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 DTNBO60941 627 aa12.45□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 MAFO75444 373 aaPredicted RBP12.45□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 PPM1AP35813 382 aa12.45□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 PSMC5P62195 406 aa12.45□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 CDC42EP1Q00587 391 aa12.45□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 SCRN1Q12765 414 aa12.45□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 ANKRD54Q6NXT1 300 aa12.45□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 SYCE2Q6PIF2 218 aa12.45□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 KRT25Q7Z3Z0 450 aa12.45□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 KSR1Q8IVT5 923 aa12.45□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 PHF20Q9BVI0 1012 aa12.45□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 TRAIPQ9BWF2 469 aa12.45□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 KCNMB3Q9NPA1 279 aa12.45□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 NGRNQ9NPE2 291 aaKnown RBP12.45□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 CHST12Q9NRB3 414 aa12.45□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 PDRG1Q9NUG6 133 aa12.45□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 DACT1Q9NYF0 836 aa12.45□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 VAV3Q9UKW4 847 aa12.45□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 ARID2Q68CP9 1835 aa12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 NT5C1B-RDH14C9J2C7 533 aa12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 TECP42680 631 aa12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 PHKA2P46019 1235 aa12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 DNM2P50570 870 aa12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 KRT17Q04695 432 aa12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 PPP2R5CQ13362 524 aa12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 LETM2Q2VYF4 491 aa12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 PLA2G4FQ68DD2 849 aa12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 LLGL2Q6P1M3 1020 aa12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 CPLX2Q6PUV4 134 aaKnown RBP12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 TMC7Q7Z402 723 aa12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 ZNF410Q86VK4 478 aa12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 RHPN2Q8IUC4 686 aa12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 ZNF579Q8NAF0 562 aaKnown RBP12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 RPGRIP1Q96KN7 1286 aa12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 FBXL18Q96ME1 805 aa12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 APOL5Q9BWW9 433 aa12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 GJB4Q9NTQ9 266 aa12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 SUCLA2Q9P2R7 463 aaPredicted RBP12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 WRAP73Q9P2S5 460 aaPredicted RBP12.44□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 STK36Q9NRP7 1315 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 C2orf71A6NGG8 1288 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 MEIS3P2A8K0S8 358 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 SFPQP23246 707 aaKnown RBP eCLIP12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 NPEPPSP55786 919 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 BCAR1P56945 870 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 ZXDAP98168 799 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 LONRF3Q496Y0 759 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 TWF2Q6IBS0 349 aaKnown RBP12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 PPP4R3AQ6IN85 833 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 TRIM67Q6ZTA4 783 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 BMP8AQ7Z5Y6 402 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 TMEM173Q86WV6 379 aaPredicted RBP12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 MRPL43Q8N983 215 aaKnown RBP12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 OXER1Q8TDS5 423 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 HAS1Q92839 578 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 LPPQ93052 612 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 FAM20AQ96MK3 541 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 NLRP4Q96MN2 994 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 MRPL9Q9BYD2 267 aaKnown RBP12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 KCNH6Q9H252 994 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 IFT122Q9HBG6 1241 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 CYP26B1Q9NR63 512 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 FAM105AQ9NUU6 356 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 CDH22Q9UJ99 828 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 TPCN1Q9ULQ1 816 aa12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 PIN4Q9Y237 131 aaKnown RBP12.43□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 CCDC194A0A1B0GVG4 234 aa12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 TMEM221A6NGB7 291 aa12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 M0R296 226 aa12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 PFKFB2O60825 505 aa12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 CLASP2O75122 1294 aaKnown RBP12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 ZNF623O75123 536 aa12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 CTDNEP1O95476 244 aa12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 SRGAP2BP0DMP2 458 aa12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 QARSP47897 775 aaKnown RBP12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 ALDH7A1P49419 539 aaKnown RBP12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 NHLH1Q02575 133 aa12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 SMC1AQ14683 1233 aaKnown RBP12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 EARS2Q5JPH6 523 aaKnown RBP12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 NEK8Q86SG6 692 aa12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 ALYREFQ86V81 257 aaKnown RBP12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 BCL7CQ8WUZ0 217 aaPredicted RBP12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 MFSD14AQ96MC6 490 aa12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 INO80BQ9C086 356 aaPredicted RBP12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 SLKQ9H2G2 1235 aaPredicted RBP12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 DHX33Q9H6R0 707 aaKnown RBP12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 NRDE2Q9H7Z3 1164 aa12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 TBC1D13Q9NVG8 400 aa12.42□□□□□ -0.42
APOC4-APOC2-202ENST00000589057 HCFC2Q9Y5Z7 792 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms