RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 DNASE1L2Q92874 299 aa8.13□□□□□ -1.11
TPM4-210ENST00000588507 GMCL1Q96IK5 515 aa8.13□□□□□ -1.11
TPM4-210ENST00000588507 IWS1Q96ST2 819 aa8.13□□□□□ -1.11
TPM4-210ENST00000588507 ADAM2Q99965 735 aa8.13□□□□□ -1.11
TPM4-210ENST00000588507 SEMA4CQ9C0C4 833 aa8.13□□□□□ -1.11
TPM4-210ENST00000588507 ELAC1Q9H777 363 aaKnown RBP8.13□□□□□ -1.11
TPM4-210ENST00000588507 ATP8A2Q9NTI2 1148 aa8.13□□□□□ -1.11
TPM4-210ENST00000588507 STK24Q9Y6E0 443 aa8.13□□□□□ -1.11
TPM4-210ENST00000588507 GREB1LQ9C091 1923 aaPredicted RBP8.13□□□□□ -1.11
TPM4-210ENST00000588507 KAT6AQ92794 2004 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 PCNX1Q96RV3 2341 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 IGSF9BQ9UPX0 1349 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 USP9YO00507 2555 aaPredicted RBP8.12□□□□□ -1.11
TPM4-210ENST00000588507 MYH4Q9Y623 1939 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 IGKV6D-41A0A0C4DH26 115 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 CCDC194A0A1B0GVG4 234 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 TRABD2BA6NFA1 517 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 M0QZ92 97 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 MEFVO15553 781 aaPredicted RBP8.12□□□□□ -1.11
TPM4-210ENST00000588507 MGEA5O60502 916 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 EIF3JO75822 258 aaKnown RBP8.12□□□□□ -1.11
TPM4-210ENST00000588507 PAPLNO95428 1278 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 TTLL1O95922 423 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 UBTFL1P0CB47 393 aaPredicted RBP8.12□□□□□ -1.11
TPM4-210ENST00000588507 CR2P20023 1033 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 RASA1P20936 1047 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 HOXC13P31276 330 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 BCAR1P56945 870 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 FAM189BP81408 668 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 LMAN2Q12907 356 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 LRRC32Q14392 662 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 KCNV1Q6PIU1 500 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 ABI1Q8IZP0 508 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 NSUN6Q8TEA1 469 aaKnown RBP8.12□□□□□ -1.11
TPM4-210ENST00000588507 CHMP4CQ96CF2 233 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 TRIM4Q9C037 500 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 NT5C3AQ9H0P0 336 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 RANBP17Q9H2T7 1088 aaKnown RBP8.12□□□□□ -1.11
TPM4-210ENST00000588507 MLXIPQ9HAP2 919 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 MTMR4Q9NYA4 1195 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 HSPBP1Q9NZL4 362 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 ZNF215Q9UL58 517 aaPredicted RBP8.12□□□□□ -1.11
TPM4-210ENST00000588507 TRPV2Q9Y5S1 764 aa8.12□□□□□ -1.11
TPM4-210ENST00000588507 FTH1P19P0C7X4 201 aa8.11□□□□□ -1.11
TPM4-210ENST00000588507 MYBP10242 640 aa8.11□□□□□ -1.11
TPM4-210ENST00000588507 MCCP23508 829 aa8.11□□□□□ -1.11
TPM4-210ENST00000588507 ELAVL4P26378 380 aaKnown RBP8.11□□□□□ -1.11
TPM4-210ENST00000588507 PXNP49023 591 aaPredicted RBP8.11□□□□□ -1.11
TPM4-210ENST00000588507 EXOSC9Q06265 439 aaKnown RBP8.11□□□□□ -1.11
TPM4-210ENST00000588507 SEMA3FQ13275 785 aa8.11□□□□□ -1.11
TPM4-210ENST00000588507 RCSD1Q6JBY9 416 aa8.11□□□□□ -1.11
TPM4-210ENST00000588507 KCTD1Q719H9 257 aa8.11□□□□□ -1.11
TPM4-210ENST00000588507 LCORLQ8N3X6 602 aa8.11□□□□□ -1.11
TPM4-210ENST00000588507 PNPLA1Q8N8W4 532 aa8.11□□□□□ -1.11
TPM4-210ENST00000588507 CEP95Q96GE4 821 aa8.11□□□□□ -1.11
TPM4-210ENST00000588507 TAAR1Q96RJ0 339 aa8.11□□□□□ -1.11
TPM4-210ENST00000588507 DBNDD2Q9BQY9 259 aa8.11□□□□□ -1.11
TPM4-210ENST00000588507 MKNK2Q9HBH9 465 aa8.11□□□□□ -1.11
TPM4-210ENST00000588507 C2orf42Q9NWW7 574 aa8.11□□□□□ -1.11
TPM4-210ENST00000588507 PNMA2Q9UL42 364 aa8.11□□□□□ -1.11
TPM4-210ENST00000588507 CCDC171Q6TFL3 1326 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 CARNS1A5YM72 827 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 PATE3B3GLJ2 98 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 RRP8O43159 456 aaKnown RBP8.1□□□□□ -1.11
TPM4-210ENST00000588507 PRKAB2O43741 272 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 GLUD1P00367 558 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 EIF2S3P41091 472 aaKnown RBP8.1□□□□□ -1.11
TPM4-210ENST00000588507 MAPK8P45983 427 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 RHDQ02161 417 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 TRIP6Q15654 476 aaKnown RBP8.1□□□□□ -1.11
TPM4-210ENST00000588507 TMEM266Q2M3C6 531 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 POTEHQ6S545 545 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 HDDC3Q8N4P3 179 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 RGS22Q8NE09 1264 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 HDAC7Q8WUI4 952 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 NANOS1Q8WY41 292 aaKnown RBP8.1□□□□□ -1.11
TPM4-210ENST00000588507 FGF13Q92913 245 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 DDRGK1Q96HY6 314 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 KIF2CQ99661 725 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 CELF4Q9BZC1 486 aaKnown RBP8.1□□□□□ -1.11
TPM4-210ENST00000588507 PRKD2Q9BZL6 878 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 SMC4Q9NTJ3 1288 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 ZDHHC7Q9NXF8 308 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 SEPT9Q9UHD8 586 aaPredicted RBP8.1□□□□□ -1.11
TPM4-210ENST00000588507 TUBE1Q9UJT0 475 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 HDAC5Q9UQL6 1122 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 FLNCQ14315 2725 aa8.1□□□□□ -1.11
TPM4-210ENST00000588507 FRMPD4Q14CM0 1322 aa8.09□□□□□ -1.11
TPM4-210ENST00000588507 ATG2BQ96BY7 2078 aa8.09□□□□□ -1.11
TPM4-210ENST00000588507 ZFHX3Q15911 3703 aa8.09□□□□□ -1.11
TPM4-210ENST00000588507 NOP56O00567 594 aaKnown RBP8.09□□□□□ -1.11
TPM4-210ENST00000588507 ECI2O75521 394 aa8.09□□□□□ -1.11
TPM4-210ENST00000588507 ODR4Q5SWX8 454 aa8.09□□□□□ -1.11
TPM4-210ENST00000588507 Q6ZS52 159 aa8.09□□□□□ -1.11
TPM4-210ENST00000588507 TMPRSS7Q7RTY8 843 aa8.09□□□□□ -1.11
TPM4-210ENST00000588507 TMEM173Q86WV6 379 aaPredicted RBP8.09□□□□□ -1.11
TPM4-210ENST00000588507 CLUAP1Q96AJ1 413 aa8.09□□□□□ -1.11
TPM4-210ENST00000588507 IGSF21Q96ID5 467 aa8.09□□□□□ -1.11
TPM4-210ENST00000588507 RMDN3Q96TC7 470 aa8.09□□□□□ -1.11
TPM4-210ENST00000588507 FAM49AQ9H0Q0 323 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms