RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 FOXD4L6Q3SYB3 417 aaPredicted RBP16.59■□□□□ 0.25
HDAC5-207ENST00000588261 KRT79Q5XKE5 535 aa16.59■□□□□ 0.25
HDAC5-207ENST00000588261 SWSAP1Q6NVH7 229 aa16.59■□□□□ 0.25
HDAC5-207ENST00000588261 FOXD4L3Q6VB84 417 aaPredicted RBP16.59■□□□□ 0.25
HDAC5-207ENST00000588261 C4orf19Q8IY42 314 aa16.59■□□□□ 0.25
HDAC5-207ENST00000588261 TMEM40Q8WWA1 233 aa16.59■□□□□ 0.25
HDAC5-207ENST00000588261 PABPC5Q96DU9 382 aaKnown RBP16.59■□□□□ 0.25
HDAC5-207ENST00000588261 EIF2AK1Q9BQI3 630 aaKnown RBP16.59■□□□□ 0.25
HDAC5-207ENST00000588261 ZSWIM4Q9H7M6 989 aa16.59■□□□□ 0.25
HDAC5-207ENST00000588261 GABBR1Q9UBS5 961 aa16.59■□□□□ 0.25
HDAC5-207ENST00000588261 PPME1Q9Y570 386 aa16.59■□□□□ 0.25
HDAC5-207ENST00000588261 PCDHA2Q9Y5H9 948 aa16.59■□□□□ 0.25
HDAC5-207ENST00000588261 KDM3AQ9Y4C1 1321 aa16.59■□□□□ 0.25
HDAC5-207ENST00000588261 LOXHD1Q8IVV2 1947 aa16.58■□□□□ 0.25
HDAC5-207ENST00000588261 DCXO43602 365 aa16.58■□□□□ 0.24
HDAC5-207ENST00000588261 MGEA5O60502 916 aa16.58■□□□□ 0.24
HDAC5-207ENST00000588261 CTNNB1P35222 781 aa16.58■□□□□ 0.24
HDAC5-207ENST00000588261 HYIQ5T013 277 aa16.58■□□□□ 0.24
HDAC5-207ENST00000588261 PDXDC2PQ6P474 469 aa16.58■□□□□ 0.24
HDAC5-207ENST00000588261 MTHFD1LQ6UB35 978 aa16.58■□□□□ 0.24
HDAC5-207ENST00000588261 ALYREFQ86V81 257 aaKnown RBP16.58■□□□□ 0.24
HDAC5-207ENST00000588261 FIBCD1Q8N539 461 aa16.58■□□□□ 0.24
HDAC5-207ENST00000588261 ATP8B4Q8TF62 1192 aa16.58■□□□□ 0.24
HDAC5-207ENST00000588261 BBXQ8WY36 941 aaPredicted RBP16.58■□□□□ 0.24
HDAC5-207ENST00000588261 LXNQ9BS40 222 aa16.58■□□□□ 0.24
HDAC5-207ENST00000588261 CCSER1Q9C0I3 900 aa16.58■□□□□ 0.24
HDAC5-207ENST00000588261 NT5C3AQ9H0P0 336 aa16.58■□□□□ 0.24
HDAC5-207ENST00000588261 NSUN3Q9H649 340 aaKnown RBP16.58■□□□□ 0.24
HDAC5-207ENST00000588261 PADI3Q9ULW8 664 aa16.58■□□□□ 0.24
HDAC5-207ENST00000588261 TRPC6Q9Y210 931 aa16.58■□□□□ 0.24
HDAC5-207ENST00000588261 TRPV2Q9Y5S1 764 aa16.58■□□□□ 0.24
HDAC5-207ENST00000588261 MRPL42Q9Y6G3 142 aaKnown RBP16.58■□□□□ 0.24
HDAC5-207ENST00000588261 KIAA1671Q9BY89 1806 aa16.58■□□□□ 0.24
HDAC5-207ENST00000588261 COL1A2P08123 1366 aa16.57■□□□□ 0.24
HDAC5-207ENST00000588261 RRN3P2A6NIE6 340 aa16.57■□□□□ 0.24
HDAC5-207ENST00000588261 SLITRK3O94933 977 aa16.57■□□□□ 0.24
HDAC5-207ENST00000588261 XRCC6P12956 609 aaKnown RBP eCLIP16.57■□□□□ 0.24
HDAC5-207ENST00000588261 TXLNAP40222 546 aa16.57■□□□□ 0.24
HDAC5-207ENST00000588261 ME1P48163 572 aa16.57■□□□□ 0.24
HDAC5-207ENST00000588261 HYAL1Q12794 435 aa16.57■□□□□ 0.24
HDAC5-207ENST00000588261 CTC1Q2NKJ3 1217 aa16.57■□□□□ 0.24
HDAC5-207ENST00000588261 XKR3Q5GH77 459 aa16.57■□□□□ 0.24
HDAC5-207ENST00000588261 EP400NLQ6ZTU2 488 aa16.57■□□□□ 0.24
HDAC5-207ENST00000588261 SNX29Q8TEQ0 813 aa16.57■□□□□ 0.24
HDAC5-207ENST00000588261 CELF4Q9BZC1 486 aaKnown RBP16.57■□□□□ 0.24
HDAC5-207ENST00000588261 CSRNP2Q9H175 543 aa16.57■□□□□ 0.24
HDAC5-207ENST00000588261 SMIM35A0A1B0GVV1 85 aa16.56■□□□□ 0.24
HDAC5-207ENST00000588261 HBP1O60381 514 aa16.56■□□□□ 0.24
HDAC5-207ENST00000588261 CSPG5O95196 566 aa16.56■□□□□ 0.24
HDAC5-207ENST00000588261 OATP04181 439 aa16.56■□□□□ 0.24
HDAC5-207ENST00000588261 RB1P06400 928 aa16.56■□□□□ 0.24
HDAC5-207ENST00000588261 SPATA31C1P0DKV0 1188 aa16.56■□□□□ 0.24
HDAC5-207ENST00000588261 UBA7P41226 1012 aa16.56■□□□□ 0.24
HDAC5-207ENST00000588261 PRKCEQ02156 737 aa16.56■□□□□ 0.24
HDAC5-207ENST00000588261 AXDND1Q5T1B0 1012 aaPredicted RBP16.56■□□□□ 0.24
HDAC5-207ENST00000588261 ADALQ6DHV7 355 aa16.56■□□□□ 0.24
HDAC5-207ENST00000588261 RSPH3Q86UC2 560 aa16.56■□□□□ 0.24
HDAC5-207ENST00000588261 CATSPER3Q86XQ3 398 aa16.56■□□□□ 0.24
HDAC5-207ENST00000588261 KIAA0319LQ8IZA0 1049 aa16.56■□□□□ 0.24
HDAC5-207ENST00000588261 TMEM87AQ8NBN3 555 aa16.56■□□□□ 0.24
HDAC5-207ENST00000588261 DYDC2Q96IM9 177 aa16.56■□□□□ 0.24
HDAC5-207ENST00000588261 MMTAG2Q9BU76 263 aaKnown RBP16.56■□□□□ 0.24
HDAC5-207ENST00000588261 ALG13Q9NP73 1137 aaKnown RBP16.56■□□□□ 0.24
HDAC5-207ENST00000588261 HCSTQ9UBK5 93 aa16.56■□□□□ 0.24
HDAC5-207ENST00000588261 PCDHA7Q9UN72 937 aa16.56■□□□□ 0.24
HDAC5-207ENST00000588261 RWDD3Q9Y3V2 267 aa16.56■□□□□ 0.24
HDAC5-207ENST00000588261 A0A1W2PQ27 194 aa16.55■□□□□ 0.24
HDAC5-207ENST00000588261 A0A1W2PQ64 194 aa16.55■□□□□ 0.24
HDAC5-207ENST00000588261 A0A1W2PQD8 194 aa16.55■□□□□ 0.24
HDAC5-207ENST00000588261 LINC01565O15544 149 aa16.55■□□□□ 0.24
HDAC5-207ENST00000588261 ZNF862O60290 1169 aa16.55■□□□□ 0.24
HDAC5-207ENST00000588261 TBX10O75333 385 aa16.55■□□□□ 0.24
HDAC5-207ENST00000588261 MED24O75448 989 aa16.55■□□□□ 0.24
HDAC5-207ENST00000588261 KLRC1P26715 233 aa16.55■□□□□ 0.24
HDAC5-207ENST00000588261 IRS1P35568 1242 aa16.55■□□□□ 0.24
HDAC5-207ENST00000588261 CCT6AP40227 531 aaKnown RBP16.55■□□□□ 0.24
HDAC5-207ENST00000588261 GRIN1Q05586 938 aa16.55■□□□□ 0.24
HDAC5-207ENST00000588261 BTG3Q14201 252 aaPredicted RBP16.55■□□□□ 0.24
HDAC5-207ENST00000588261 UGCGQ16739 394 aa16.55■□□□□ 0.24
HDAC5-207ENST00000588261 CABP7Q86V35 215 aa16.55■□□□□ 0.24
HDAC5-207ENST00000588261 CALML4Q96GE6 196 aa16.55■□□□□ 0.24
HDAC5-207ENST00000588261 NIFKQ9BYG3 293 aaKnown RBP16.55■□□□□ 0.24
HDAC5-207ENST00000588261 LMAN2LQ9H0V9 348 aa16.55■□□□□ 0.24
HDAC5-207ENST00000588261 ERVK-5Q9HDB9 667 aa16.55■□□□□ 0.24
HDAC5-207ENST00000588261 NRBP2Q9NSY0 501 aa16.55■□□□□ 0.24
HDAC5-207ENST00000588261 RGL1Q9NZL6 768 aa16.55■□□□□ 0.24
HDAC5-207ENST00000588261 PLAGL2Q9UPG8 496 aa16.55■□□□□ 0.24
HDAC5-207ENST00000588261 NOC2LQ9Y3T9 749 aaKnown RBP16.55■□□□□ 0.24
HDAC5-207ENST00000588261 PCDHGC5Q9Y5F6 944 aa16.55■□□□□ 0.24
HDAC5-207ENST00000588261 SQORQ9Y6N5 450 aa16.55■□□□□ 0.24
HDAC5-207ENST00000588261 C22orf31O95567 290 aa16.54■□□□□ 0.24
HDAC5-207ENST00000588261 ITGB1P05556 798 aa16.54■□□□□ 0.24
HDAC5-207ENST00000588261 CYP4A11Q02928 519 aa16.54■□□□□ 0.24
HDAC5-207ENST00000588261 ZNF484Q5JVG2 852 aa16.54■□□□□ 0.24
HDAC5-207ENST00000588261 IER5Q5VY09 327 aa16.54■□□□□ 0.24
HDAC5-207ENST00000588261 OTUD6AQ7L8S5 288 aa16.54■□□□□ 0.24
HDAC5-207ENST00000588261 ADGRD2Q7Z7M1 963 aa16.54■□□□□ 0.24
HDAC5-207ENST00000588261 TPH2Q8IWU9 490 aa16.54■□□□□ 0.24
HDAC5-207ENST00000588261 ADHFE1Q8IWW8 467 aa16.54■□□□□ 0.24
HDAC5-207ENST00000588261 GBP4Q96PP9 640 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms