RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 CALML4Q96GE6 196 aa16.06■□□□□ 0.16
CCDC43-203ENST00000588210 SENP7Q9BQF6 1050 aa16.06■□□□□ 0.16
CCDC43-203ENST00000588210 NOC4LQ9BVI4 516 aaKnown RBP16.06■□□□□ 0.16
CCDC43-203ENST00000588210 MOXD2PA6NHM9 499 aa16.05■□□□□ 0.16
CCDC43-203ENST00000588210 MEIS1O00470 390 aa16.05■□□□□ 0.16
CCDC43-203ENST00000588210 ZEB2O60315 1214 aa16.05■□□□□ 0.16
CCDC43-203ENST00000588210 CIITAP33076 1130 aa16.05■□□□□ 0.16
CCDC43-203ENST00000588210 KLK7P49862 253 aa16.05■□□□□ 0.16
CCDC43-203ENST00000588210 CPT1AP50416 773 aa16.05■□□□□ 0.16
CCDC43-203ENST00000588210 LAMC2Q13753 1193 aa16.05■□□□□ 0.16
CCDC43-203ENST00000588210 FSCN1Q16658 493 aaKnown RBP16.05■□□□□ 0.16
CCDC43-203ENST00000588210 BRDTQ58F21 947 aaPredicted RBP16.05■□□□□ 0.16
CCDC43-203ENST00000588210 CENPPQ6IPU0 288 aa16.05■□□□□ 0.16
CCDC43-203ENST00000588210 DHX37Q8IY37 1157 aaKnown RBP16.05■□□□□ 0.16
CCDC43-203ENST00000588210 DIS3LQ8TF46 1054 aaKnown RBP16.05■□□□□ 0.16
CCDC43-203ENST00000588210 ACBD3Q9H3P7 528 aa16.05■□□□□ 0.16
CCDC43-203ENST00000588210 C11orf49Q9H6J7 331 aa16.05■□□□□ 0.16
CCDC43-203ENST00000588210 SUGCTQ9HAC7 445 aa16.05■□□□□ 0.16
CCDC43-203ENST00000588210 HDAC6Q9UBN7 1215 aa16.05■□□□□ 0.16
CCDC43-203ENST00000588210 STK17AQ9UEE5 414 aa16.05■□□□□ 0.16
CCDC43-203ENST00000588210 TARSL2A2RTX5 802 aaKnown RBP16.04■□□□□ 0.16
CCDC43-203ENST00000588210 MYADML2A6NDP7 307 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 ENC1O14682 589 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 COL6A1P12109 1028 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 UBA1P22314 1058 aaKnown RBP16.04■□□□□ 0.16
CCDC43-203ENST00000588210 HNRNPH3P31942 346 aaKnown RBP16.04■□□□□ 0.16
CCDC43-203ENST00000588210 TECP42680 631 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 SP2Q02086 613 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 ARHGAP1Q07960 439 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 KCNA10Q16322 511 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 CELF3Q5SZQ8 465 aaKnown RBP16.04■□□□□ 0.16
CCDC43-203ENST00000588210 FKBP15Q5T1M5 1219 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 POTEDQ86YR6 584 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 CYP2W1Q8TAV3 490 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 TSGA10Q9BZW7 698 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 VIPAS39Q9H9C1 493 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 KCNH7Q9NS40 1196 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 TFR2Q9UP52 801 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 PHF24Q9UPV7 400 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 MKI67P46013 3256 aaKnown RBP16.04■□□□□ 0.16
CCDC43-203ENST00000588210 A6NJR5 290 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 FAM86B1E9PN63 330 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 FAM86B2P0C5J1 330 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 FXR2P51116 673 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCDC43-203ENST00000588210 VAV2P52735 878 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 IRX5P78411 483 aaPredicted RBP16.04■□□□□ 0.16
CCDC43-203ENST00000588210 GRB10Q13322 594 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 UNC13DQ70J99 1090 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 FAM71BQ8TC56 605 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 PCMTD1Q96MG8 357 aaPredicted RBP16.04■□□□□ 0.16
CCDC43-203ENST00000588210 MTMR9Q96QG7 549 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 MMS19Q96T76 1030 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 LACRTQ9GZZ8 138 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 SEMA6BQ9H3T3 888 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 MLXIPQ9HAP2 919 aa16.04■□□□□ 0.16
CCDC43-203ENST00000588210 MYH10P35580 1976 aa16.03■□□□□ 0.16
CCDC43-203ENST00000588210 IGLV3-22A0A075B6J6 115 aa16.03■□□□□ 0.16
CCDC43-203ENST00000588210 PVALEFA0A1B0GWK0 134 aa16.03■□□□□ 0.16
CCDC43-203ENST00000588210 RCCD1A6NED2 376 aa16.03■□□□□ 0.16
CCDC43-203ENST00000588210 EDIL3O43854 480 aa16.03■□□□□ 0.16
CCDC43-203ENST00000588210 GGPS1O95749 300 aa16.03■□□□□ 0.16
CCDC43-203ENST00000588210 ASGR1P07306 291 aa16.03■□□□□ 0.16
CCDC43-203ENST00000588210 BEX3Q00994 111 aa16.03■□□□□ 0.16
CCDC43-203ENST00000588210 SETQ01105 290 aaPredicted RBP16.03■□□□□ 0.16
CCDC43-203ENST00000588210 SENP6Q9GZR1 1112 aaPredicted RBP16.03■□□□□ 0.16
CCDC43-203ENST00000588210 BLOC1S4Q9NUP1 217 aa16.03■□□□□ 0.16
CCDC43-203ENST00000588210 VPS18Q9P253 973 aa16.03■□□□□ 0.16
CCDC43-203ENST00000588210 ACLYP53396 1101 aa16.03■□□□□ 0.16
CCDC43-203ENST00000588210 GYS2P54840 703 aa16.03■□□□□ 0.16
CCDC43-203ENST00000588210 MAP9Q49MG5 647 aa16.03■□□□□ 0.16
CCDC43-203ENST00000588210 MOXD1Q6UVY6 613 aa16.03■□□□□ 0.16
CCDC43-203ENST00000588210 METTL7BQ6UX53 244 aa16.03■□□□□ 0.16
CCDC43-203ENST00000588210 SV2BQ7L1I2 683 aa16.03■□□□□ 0.16
CCDC43-203ENST00000588210 PNMA5Q96PV4 448 aa16.03■□□□□ 0.16
CCDC43-203ENST00000588210 MED4Q9NPJ6 270 aa16.03■□□□□ 0.16
CCDC43-203ENST00000588210 CYP3A7-CYP3A51PA0A087WV96 503 aa16.02■□□□□ 0.15
CCDC43-203ENST00000588210 KPNA6O60684 536 aa16.02■□□□□ 0.15
CCDC43-203ENST00000588210 ATP9AO75110 1047 aa16.02■□□□□ 0.15
CCDC43-203ENST00000588210 KCNA2P16389 499 aa16.02■□□□□ 0.15
CCDC43-203ENST00000588210 CYP3A7P24462 503 aa16.02■□□□□ 0.15
CCDC43-203ENST00000588210 CALCRLQ16602 461 aa16.02■□□□□ 0.15
CCDC43-203ENST00000588210 VWA3BQ502W6 1294 aa16.02■□□□□ 0.15
CCDC43-203ENST00000588210 FOXR2Q6PJQ5 311 aa16.02■□□□□ 0.15
CCDC43-203ENST00000588210 PPTC7Q8NI37 304 aa16.02■□□□□ 0.15
CCDC43-203ENST00000588210 AFG1LQ8WV93 481 aa16.02■□□□□ 0.15
CCDC43-203ENST00000588210 SPATA33Q96N06 139 aa16.02■□□□□ 0.15
CCDC43-203ENST00000588210 NAP1L4Q99733 375 aaKnown RBP16.02■□□□□ 0.15
CCDC43-203ENST00000588210 PLAGL2Q9UPG8 496 aa16.02■□□□□ 0.15
CCDC43-203ENST00000588210 SIK3Q9Y2K2 1263 aa16.02■□□□□ 0.15
CCDC43-203ENST00000588210 MYMKA6NI61 221 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 LRRIQ3A6PVS8 624 aaPredicted RBP16.01■□□□□ 0.15
CCDC43-203ENST00000588210 CABYRO75952 493 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 ARP10275 920 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 LMAN1P49257 510 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 AARSP49588 968 aaKnown RBP eCLIP16.01■□□□□ 0.15
CCDC43-203ENST00000588210 KIF5AQ12840 1032 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 MAN2A1Q16706 1144 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 TMEM266Q2M3C6 531 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 PRR16Q569H4 304 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 HSP90B2PQ58FF3 399 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms