RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 OXER1Q8TDS5 423 aa17.08■□□□□ 0.32
PRKCSH-204ENST00000587290 NLRP4Q96MN2 994 aa17.08■□□□□ 0.32
PRKCSH-204ENST00000587290 MBOAT7Q96N66 472 aa17.08■□□□□ 0.32
PRKCSH-204ENST00000587290 NIFKQ9BYG3 293 aaKnown RBP17.08■□□□□ 0.32
PRKCSH-204ENST00000587290 RNF216Q9NWF9 866 aaPredicted RBP17.08■□□□□ 0.32
PRKCSH-204ENST00000587290 WRAP73Q9P2S5 460 aaPredicted RBP17.08■□□□□ 0.32
PRKCSH-204ENST00000587290 ARIH1Q9Y4X5 557 aaPredicted RBP17.08■□□□□ 0.32
PRKCSH-204ENST00000587290 ZDBF2Q9HCK1 2354 aa17.07■□□□□ 0.32
PRKCSH-204ENST00000587290 A0A0U1RQF3 1178 aa17.07■□□□□ 0.32
PRKCSH-204ENST00000587290 FAM205CA6NFA0 338 aa17.07■□□□□ 0.32
PRKCSH-204ENST00000587290 LOC730098B7Z3J9 87 aa17.07■□□□□ 0.32
PRKCSH-204ENST00000587290 HOXA2O43364 376 aa17.07■□□□□ 0.32
PRKCSH-204ENST00000587290 TECP42680 631 aa17.07■□□□□ 0.32
PRKCSH-204ENST00000587290 NPEPPSP55786 919 aa17.07■□□□□ 0.32
PRKCSH-204ENST00000587290 PLCB3Q01970 1234 aa17.07■□□□□ 0.32
PRKCSH-204ENST00000587290 RDM1Q8NG50 284 aa17.07■□□□□ 0.32
PRKCSH-204ENST00000587290 TM6SF1Q9BZW5 370 aa17.07■□□□□ 0.32
PRKCSH-204ENST00000587290 SUCLA2Q9P2R7 463 aaPredicted RBP17.07■□□□□ 0.32
PRKCSH-204ENST00000587290 VAV3Q9UKW4 847 aa17.07■□□□□ 0.32
PRKCSH-204ENST00000587290 MYO10Q9HD67 2058 aa17.07■□□□□ 0.32
PRKCSH-204ENST00000587290 PIEZO1Q92508 2521 aa17.06■□□□□ 0.32
PRKCSH-204ENST00000587290 KMT2EQ8IZD2 1858 aa17.06■□□□□ 0.32
PRKCSH-204ENST00000587290 IGKV6-21A0A0C4DH24 114 aa17.06■□□□□ 0.32
PRKCSH-204ENST00000587290 CA8P35219 290 aa17.06■□□□□ 0.32
PRKCSH-204ENST00000587290 KCNC3Q14003 757 aa17.06■□□□□ 0.32
PRKCSH-204ENST00000587290 EARS2Q5JPH6 523 aaKnown RBP17.06■□□□□ 0.32
PRKCSH-204ENST00000587290 SYCE2Q6PIF2 218 aa17.06■□□□□ 0.32
PRKCSH-204ENST00000587290 KRT25Q7Z3Z0 450 aa17.06■□□□□ 0.32
PRKCSH-204ENST00000587290 TMC7Q7Z402 723 aa17.06■□□□□ 0.32
PRKCSH-204ENST00000587290 SLC39A11Q8N1S5 342 aa17.06■□□□□ 0.32
PRKCSH-204ENST00000587290 AUTS2Q8WXX7 1259 aa17.06■□□□□ 0.32
PRKCSH-204ENST00000587290 SUSD6Q92537 303 aa17.06■□□□□ 0.32
PRKCSH-204ENST00000587290 GCOM2Q9BZD3 368 aaPredicted RBP17.06■□□□□ 0.32
PRKCSH-204ENST00000587290 C22orf23Q9BZE7 217 aa17.06■□□□□ 0.32
PRKCSH-204ENST00000587290 SPG21Q9NZD8 308 aa17.06■□□□□ 0.32
PRKCSH-204ENST00000587290 TPCN1Q9ULQ1 816 aa17.06■□□□□ 0.32
PRKCSH-204ENST00000587290 PIN4Q9Y237 131 aaKnown RBP17.06■□□□□ 0.32
PRKCSH-204ENST00000587290 LZTS1Q9Y250 596 aa17.06■□□□□ 0.32
PRKCSH-204ENST00000587290 INPP5FQ9Y2H2 1132 aa17.06■□□□□ 0.32
PRKCSH-204ENST00000587290 B4GALT3O60512 393 aa17.05■□□□□ 0.32
PRKCSH-204ENST00000587290 ZC3H11AO75152 810 aaKnown RBP eCLIP17.05■□□□□ 0.32
PRKCSH-204ENST00000587290 PHKA2P46019 1235 aa17.05■□□□□ 0.32
PRKCSH-204ENST00000587290 BCAR1P56945 870 aa17.05■□□□□ 0.32
PRKCSH-204ENST00000587290 TWF2Q6IBS0 349 aaKnown RBP17.05■□□□□ 0.32
PRKCSH-204ENST00000587290 ANKRD54Q6NXT1 300 aa17.05■□□□□ 0.32
PRKCSH-204ENST00000587290 CPLX2Q6PUV4 134 aaKnown RBP17.05■□□□□ 0.32
PRKCSH-204ENST00000587290 POTEDQ86YR6 584 aa17.05■□□□□ 0.32
PRKCSH-204ENST00000587290 FEZF2Q8TBJ5 459 aa17.05■□□□□ 0.32
PRKCSH-204ENST00000587290 BCL7CQ8WUZ0 217 aaPredicted RBP17.05■□□□□ 0.32
PRKCSH-204ENST00000587290 FBXL18Q96ME1 805 aa17.05■□□□□ 0.32
PRKCSH-204ENST00000587290 CDCA3Q99618 268 aaPredicted RBP17.05■□□□□ 0.32
PRKCSH-204ENST00000587290 PHF20Q9BVI0 1012 aa17.05■□□□□ 0.32
PRKCSH-204ENST00000587290 PHF7Q9BWX1 381 aaPredicted RBP17.05■□□□□ 0.32
PRKCSH-204ENST00000587290 S1PR5Q9H228 398 aa17.05■□□□□ 0.32
PRKCSH-204ENST00000587290 PUF60Q9UHX1 559 aaKnown RBP17.05■□□□□ 0.32
PRKCSH-204ENST00000587290 CCDC194A0A1B0GVG4 234 aa17.04■□□□□ 0.32
PRKCSH-204ENST00000587290 MAFO75444 373 aaPredicted RBP17.04■□□□□ 0.32
PRKCSH-204ENST00000587290 CTDNEP1O95476 244 aa17.04■□□□□ 0.32
PRKCSH-204ENST00000587290 PPM1AP35813 382 aa17.04■□□□□ 0.32
PRKCSH-204ENST00000587290 PSMC5P62195 406 aa17.04■□□□□ 0.32
PRKCSH-204ENST00000587290 PDE12Q6L8Q7 609 aaKnown RBP17.04■□□□□ 0.32
PRKCSH-204ENST00000587290 MOXD1Q6UVY6 613 aa17.04■□□□□ 0.32
PRKCSH-204ENST00000587290 FAM43BQ6ZT52 329 aaPredicted RBP17.04■□□□□ 0.32
PRKCSH-204ENST00000587290 PIK3AP1Q6ZUJ8 805 aa17.04■□□□□ 0.32
PRKCSH-204ENST00000587290 ALYREFQ86V81 257 aaKnown RBP17.04■□□□□ 0.32
PRKCSH-204ENST00000587290 EDAQ92838 391 aa17.04■□□□□ 0.32
PRKCSH-204ENST00000587290 SLKQ9H2G2 1235 aaPredicted RBP17.04■□□□□ 0.32
PRKCSH-204ENST00000587290 KCNMB3Q9NPA1 279 aa17.04■□□□□ 0.32
PRKCSH-204ENST00000587290 CYP26B1Q9NR63 512 aa17.04■□□□□ 0.32
PRKCSH-204ENST00000587290 DACT1Q9NYF0 836 aa17.04■□□□□ 0.32
PRKCSH-204ENST00000587290 ZBTB39O15060 712 aa17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 CCNT1O60563 726 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 EOMESO95936 686 aa17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 WEE2P0C1S8 567 aa17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 SFPQP23246 707 aaKnown RBP eCLIP17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 DNM2P50570 870 aa17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 FOSBP53539 338 aa17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 KRT17Q04695 432 aa17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 PPP2R5CQ13362 524 aa17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 CBX2Q14781 532 aaPredicted RBP17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 GALNT17Q6IS24 598 aa17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 KANK3Q6NY19 840 aa17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 CATSPER4Q7RTX7 472 aa17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 NEK8Q86SG6 692 aa17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 HAS1Q92839 578 aa17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 TMEM143Q96AN5 459 aa17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 GBP3Q9H0R5 595 aa17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 MINDY3Q9H8M7 445 aa17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 IFT122Q9HBG6 1241 aa17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 NGRNQ9NPE2 291 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 FAM105AQ9NUU6 356 aa17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 RGL1Q9NZL6 768 aa17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 DNAJB4Q9UDY4 337 aa17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 HCFC2Q9Y5Z7 792 aa17.03■□□□□ 0.32
PRKCSH-204ENST00000587290 C2orf16Q68DN1 1984 aa17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 STK36Q9NRP7 1315 aa17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 TMEM221A6NGB7 291 aa17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 C2orf71A6NGG8 1288 aa17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 M0R296 226 aa17.02■□□□□ 0.32
PRKCSH-204ENST00000587290 EPB41L2O43491 1005 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms