RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 EFHBQ8N7U6 833 aa8.79□□□□□ -1
VMP1-204ENST00000587259 SMRP1Q8NCR6 262 aa8.79□□□□□ -1
VMP1-204ENST00000587259 FEZF2Q8TBJ5 459 aa8.79□□□□□ -1
VMP1-204ENST00000587259 MICAL1Q8TDZ2 1067 aa8.79□□□□□ -1
VMP1-204ENST00000587259 GPRASP2Q96D09 838 aa8.79□□□□□ -1
VMP1-204ENST00000587259 MFSD14AQ96MC6 490 aa8.79□□□□□ -1
VMP1-204ENST00000587259 USP28Q96RU2 1077 aa8.79□□□□□ -1
VMP1-204ENST00000587259 NUP62CLQ9H1M0 184 aa8.79□□□□□ -1
VMP1-204ENST00000587259 SMOC2Q9H3U7 446 aa8.79□□□□□ -1
VMP1-204ENST00000587259 PSTPIP2Q9H939 334 aa8.79□□□□□ -1
VMP1-204ENST00000587259 GRPEL1Q9HAV7 217 aa8.79□□□□□ -1
VMP1-204ENST00000587259 TMEM260Q9NX78 707 aa8.79□□□□□ -1
VMP1-204ENST00000587259 TMEM63CQ9P1W3 806 aa8.79□□□□□ -1
VMP1-204ENST00000587259 PCDHA6Q9UN73 950 aa8.79□□□□□ -1
VMP1-204ENST00000587259 PCDHA8Q9Y5H6 950 aa8.79□□□□□ -1
VMP1-204ENST00000587259 TRPV2Q9Y5S1 764 aa8.79□□□□□ -1
VMP1-204ENST00000587259 KAT6AQ92794 2004 aa8.79□□□□□ -1
VMP1-204ENST00000587259 ZDBF2Q9HCK1 2354 aa8.79□□□□□ -1
VMP1-204ENST00000587259 LOXHD1Q8IVV2 1947 aa8.78□□□□□ -1
VMP1-204ENST00000587259 USP34Q70CQ2 3546 aa8.78□□□□□ -1
VMP1-204ENST00000587259 TBKBP1A7MCY6 615 aa8.78□□□□□ -1
VMP1-204ENST00000587259 LOC730098B7Z3J9 87 aa8.78□□□□□ -1
VMP1-204ENST00000587259 PIK3CDO00329 1044 aa8.78□□□□□ -1
VMP1-204ENST00000587259 ADAMTS3O15072 1205 aa8.78□□□□□ -1
VMP1-204ENST00000587259 SPTLC2O15270 562 aa8.78□□□□□ -1
VMP1-204ENST00000587259 NCK2O43639 380 aa8.78□□□□□ -1
VMP1-204ENST00000587259 KINO60870 393 aaKnown RBP8.78□□□□□ -1
VMP1-204ENST00000587259 GADD45BO75293 160 aaPredicted RBP8.78□□□□□ -1
VMP1-204ENST00000587259 EYA4O95677 639 aa8.78□□□□□ -1
VMP1-204ENST00000587259 CCDC192P0DO97 292 aa8.78□□□□□ -1
VMP1-204ENST00000587259 FOSBP53539 338 aa8.78□□□□□ -1
VMP1-204ENST00000587259 ACTR2P61160 394 aa8.78□□□□□ -1
VMP1-204ENST00000587259 FUT2Q10981 343 aa8.78□□□□□ -1
VMP1-204ENST00000587259 ITGB3BPQ13352 177 aaPredicted RBP8.78□□□□□ -1
VMP1-204ENST00000587259 SPOUT1Q5T280 376 aaKnown RBP8.78□□□□□ -1
VMP1-204ENST00000587259 TYW1BQ6NUM6 668 aa8.78□□□□□ -1
VMP1-204ENST00000587259 HEATR3Q7Z4Q2 680 aa8.78□□□□□ -1
VMP1-204ENST00000587259 TEX2Q8IWB9 1127 aa8.78□□□□□ -1
VMP1-204ENST00000587259 LINC00301Q8NCQ3 95 aa8.78□□□□□ -1
VMP1-204ENST00000587259 PTCD2Q8WV60 388 aaKnown RBP8.78□□□□□ -1
VMP1-204ENST00000587259 MRPS27Q92552 414 aaKnown RBP8.78□□□□□ -1
VMP1-204ENST00000587259 ZNF668Q96K58 619 aaPredicted RBP8.78□□□□□ -1
VMP1-204ENST00000587259 POP1Q99575 1024 aaKnown RBP8.78□□□□□ -1
VMP1-204ENST00000587259 PHF20Q9BVI0 1012 aa8.78□□□□□ -1
VMP1-204ENST00000587259 PLVAPQ9BX97 442 aa8.78□□□□□ -1
VMP1-204ENST00000587259 CELF4Q9BZC1 486 aaKnown RBP8.78□□□□□ -1
VMP1-204ENST00000587259 TNMDQ9H2S6 317 aa8.78□□□□□ -1
VMP1-204ENST00000587259 TSPY26PQ9H489 355 aa8.78□□□□□ -1
VMP1-204ENST00000587259 SMARCAD1Q9H4L7 1026 aa8.78□□□□□ -1
VMP1-204ENST00000587259 TLE6Q9H808 572 aa8.78□□□□□ -1
VMP1-204ENST00000587259 JPH1Q9HDC5 661 aaPredicted RBP8.78□□□□□ -1
VMP1-204ENST00000587259 JADE2Q9NQC1 790 aa8.78□□□□□ -1
VMP1-204ENST00000587259 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.78□□□□□ -1
VMP1-204ENST00000587259 RYDENQ9NUL5 291 aaKnown RBP8.78□□□□□ -1
VMP1-204ENST00000587259 TFIP11Q9UBB9 837 aaKnown RBP8.78□□□□□ -1
VMP1-204ENST00000587259 NOC2LQ9Y3T9 749 aaKnown RBP8.78□□□□□ -1
VMP1-204ENST00000587259 RWDD3Q9Y3V2 267 aa8.78□□□□□ -1
VMP1-204ENST00000587259 IGSF9BQ9UPX0 1349 aa8.78□□□□□ -1
VMP1-204ENST00000587259 SYCE3A1L190 88 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 CCNE2O96020 404 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 WEE2P0C1S8 567 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 KLRC1P26715 233 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 GNA11P29992 359 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 KRT76Q01546 638 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 FAM160A1Q05DH4 1040 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 COASYQ13057 564 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 TRAF1Q13077 416 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 SLC39A14Q15043 492 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 IER5Q5VY09 327 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 PLPP4Q5VZY2 271 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 WWC2Q6AWC2 1192 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 KANK3Q6NY19 840 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 PPP1R18Q6NYC8 613 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 FAM173BQ6P4H8 233 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 MTHFD1LQ6UB35 978 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 DAGLBQ8NCG7 672 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 P2RX5Q93086 422 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 RNF166Q96A37 237 aaPredicted RBP8.77□□□□□ -1.01
VMP1-204ENST00000587259 ASIC4Q96FT7 647 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 ADAM2Q99965 735 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 PYM1Q9BRP8 204 aaKnown RBP8.77□□□□□ -1.01
VMP1-204ENST00000587259 GLT8D2Q9H1C3 349 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 ERVK-5Q9HDB9 667 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 KCNH7Q9NS40 1196 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 TYW1Q9NV66 732 aaKnown RBP8.77□□□□□ -1.01
VMP1-204ENST00000587259 SLC9A2Q9UBY0 812 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 HOOK1Q9UJC3 728 aaKnown RBP8.77□□□□□ -1.01
VMP1-204ENST00000587259 LRFN2Q9ULH4 789 aa8.77□□□□□ -1.01
VMP1-204ENST00000587259 V9GY48 417 aaPredicted RBP8.77□□□□□ -1.01
VMP1-204ENST00000587259 ZFHX2Q9C0A1 2572 aaPredicted RBP8.76□□□□□ -1.01
VMP1-204ENST00000587259 CFAP54Q96N23 3096 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 ESYT2A0FGR8 921 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 SPDYE3A6NKU9 549 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 HIDE1A8MVS5 230 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 H0Y858 1186 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 M0QZ92 97 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 CUTAO60888 179 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 FGF18O76093 207 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 VTNP04004 478 aa8.76□□□□□ -1.01
VMP1-204ENST00000587259 ATP4AP20648 1035 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms