RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 TIGD5Q53EQ6 642 aa22.58■■□□□ 1.21
VAT1-203ENST00000587062 LARP1BQ659C4 914 aaKnown RBP22.58■■□□□ 1.21
VAT1-203ENST00000587062 P2RX5Q93086 422 aa22.58■■□□□ 1.21
VAT1-203ENST00000587062 TMEM143Q96AN5 459 aa22.58■■□□□ 1.21
VAT1-203ENST00000587062 PCDHB12Q9Y5F1 795 aa22.58■■□□□ 1.21
VAT1-203ENST00000587062 TBKBP1A7MCY6 615 aa22.57■■□□□ 1.2
VAT1-203ENST00000587062 PDCP20941 246 aa22.57■■□□□ 1.2
VAT1-203ENST00000587062 RPA1P27694 616 aa22.57■■□□□ 1.2
VAT1-203ENST00000587062 PHKA2P46019 1235 aa22.57■■□□□ 1.2
VAT1-203ENST00000587062 LAMTOR4Q0VGL1 99 aa22.57■■□□□ 1.2
VAT1-203ENST00000587062 CSPP1Q1MSJ5 1256 aa22.57■■□□□ 1.2
VAT1-203ENST00000587062 TJAP1Q5JTD0 557 aa22.57■■□□□ 1.2
VAT1-203ENST00000587062 LRWD1Q9UFC0 647 aa22.57■■□□□ 1.2
VAT1-203ENST00000587062 NLRC5Q86WI3 1866 aa22.56■■□□□ 1.2
VAT1-203ENST00000587062 A0A0U1RQF3 1178 aa22.56■■□□□ 1.2
VAT1-203ENST00000587062 FXR2P51116 673 aaKnown RBP eCLIP22.56■■□□□ 1.23e-9■■□□□ 11.4
VAT1-203ENST00000587062 RAB27AP51159 221 aa22.56■■□□□ 1.2
VAT1-203ENST00000587062 PTGDRQ13258 359 aa22.56■■□□□ 1.2
VAT1-203ENST00000587062 TWF2Q6IBS0 349 aaKnown RBP22.56■■□□□ 1.2
VAT1-203ENST00000587062 FERMT3Q86UX7 667 aa22.56■■□□□ 1.2
VAT1-203ENST00000587062 CATSPER3Q86XQ3 398 aa22.56■■□□□ 1.2
VAT1-203ENST00000587062 ECHDC2Q86YB7 292 aa22.56■■□□□ 1.2
VAT1-203ENST00000587062 ZNF579Q8NAF0 562 aaKnown RBP22.56■■□□□ 1.2
VAT1-203ENST00000587062 HLA-CQ95604 372 aa22.56■■□□□ 1.2
VAT1-203ENST00000587062 PPP2R3CQ969Q6 453 aa22.56■■□□□ 1.2
VAT1-203ENST00000587062 TMEM117Q9H0C3 514 aa22.56■■□□□ 1.2
VAT1-203ENST00000587062 BMP2KQ9NSY1 1161 aaPredicted RBP22.56■■□□□ 1.2
VAT1-203ENST00000587062 PIN4Q9Y237 131 aaKnown RBP22.56■■□□□ 1.2
VAT1-203ENST00000587062 MRPL42Q9Y6G3 142 aaKnown RBP22.56■■□□□ 1.2
VAT1-203ENST00000587062 ZBTB39O15060 712 aa22.55■■□□□ 1.2
VAT1-203ENST00000587062 ERLIN2O94905 339 aa22.55■■□□□ 1.2
VAT1-203ENST00000587062 CD2BP2O95400 341 aaKnown RBP22.55■■□□□ 1.2
VAT1-203ENST00000587062 FGFR4P22455 802 aa22.55■■□□□ 1.2
VAT1-203ENST00000587062 RARRES1P49788 294 aa22.55■■□□□ 1.2
VAT1-203ENST00000587062 POU5F1BQ06416 359 aa22.55■■□□□ 1.2
VAT1-203ENST00000587062 DTHD1Q6ZMT9 781 aa22.55■■□□□ 1.2
VAT1-203ENST00000587062 KSR1Q8IVT5 923 aa22.55■■□□□ 1.2
VAT1-203ENST00000587062 RNF149Q8NC42 400 aa22.55■■□□□ 1.2
VAT1-203ENST00000587062 RNF169Q8NCN4 708 aa22.55■■□□□ 1.2
VAT1-203ENST00000587062 MCPH1Q8NEM0 835 aa22.55■■□□□ 1.2
VAT1-203ENST00000587062 PIGOQ8TEQ8 1089 aa22.55■■□□□ 1.2
VAT1-203ENST00000587062 DBR1Q9UK59 544 aaKnown RBP22.55■■□□□ 1.2
VAT1-203ENST00000587062 COL4A4P53420 1690 aaPredicted RBP22.55■■□□□ 1.2
VAT1-203ENST00000587062 COL6A3P12111 3177 aa22.54■■□□□ 1.2
VAT1-203ENST00000587062 CARNS1A5YM72 827 aa22.54■■□□□ 1.2
VAT1-203ENST00000587062 RBAK-RBAKDNI3L0D1 243 aa22.54■■□□□ 1.2
VAT1-203ENST00000587062 NCK2O43639 380 aa22.54■■□□□ 1.2
VAT1-203ENST00000587062 CCT6AP40227 531 aaKnown RBP22.54■■□□□ 1.2
VAT1-203ENST00000587062 PRPHP41219 470 aa22.54■■□□□ 1.2
VAT1-203ENST00000587062 FAM102BQ5T8I3 360 aa22.54■■□□□ 1.2
VAT1-203ENST00000587062 PGBD4Q96DM1 585 aa22.54■■□□□ 1.2
VAT1-203ENST00000587062 ASB2Q96Q27 587 aa22.54■■□□□ 1.2
VAT1-203ENST00000587062 TRAIPQ9BWF2 469 aa22.54■■□□□ 1.2
VAT1-203ENST00000587062 IFT122Q9HBG6 1241 aa22.54■■□□□ 1.2
VAT1-203ENST00000587062 ARHGEF35A5YM69 484 aa22.53■■□□□ 1.2
VAT1-203ENST00000587062 CSDE1O75534 798 aaKnown RBP22.53■■□□□ 1.2
VAT1-203ENST00000587062 SPATA31C1P0DKV0 1188 aa22.53■■□□□ 1.2
VAT1-203ENST00000587062 LAG3P18627 525 aa22.53■■□□□ 1.2
VAT1-203ENST00000587062 KRT79Q5XKE5 535 aa22.53■■□□□ 1.2
VAT1-203ENST00000587062 MRPL9Q9BYD2 267 aaKnown RBP22.53■■□□□ 1.2
VAT1-203ENST00000587062 NSUN3Q9H649 340 aaKnown RBP22.53■■□□□ 1.2
VAT1-203ENST00000587062 PRDM6Q9NQX0 595 aa22.53■■□□□ 1.2
VAT1-203ENST00000587062 PCDHB6Q9Y5E3 794 aa22.53■■□□□ 1.2
VAT1-203ENST00000587062 PRRC2BQ5JSZ5 2229 aaKnown RBP22.53■■□□□ 1.2
VAT1-203ENST00000587062 USO1O60763 962 aaKnown RBP22.52■■□□□ 1.2
VAT1-203ENST00000587062 MED24O75448 989 aa22.52■■□□□ 1.2
VAT1-203ENST00000587062 AXLP30530 894 aa22.52■■□□□ 1.2
VAT1-203ENST00000587062 TOB1P50616 345 aaPredicted RBP22.52■■□□□ 1.2
VAT1-203ENST00000587062 LRRC43Q8N309 656 aa22.52■■□□□ 1.2
VAT1-203ENST00000587062 C4orf32Q8N8J7 132 aa22.52■■□□□ 1.2
VAT1-203ENST00000587062 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.52■■□□□ 1.2
VAT1-203ENST00000587062 PLAGL2Q9UPG8 496 aa22.52■■□□□ 1.2
VAT1-203ENST00000587062 CDH23Q9H251 3354 aa22.52■■□□□ 1.19
VAT1-203ENST00000587062 FGFR1P11362 822 aa22.51■■□□□ 1.19
VAT1-203ENST00000587062 UBE3AQ05086 875 aa22.51■■□□□ 1.19
VAT1-203ENST00000587062 CUL4AQ13619 759 aa22.51■■□□□ 1.19
VAT1-203ENST00000587062 NBR1Q14596 966 aa22.51■■□□□ 1.19
VAT1-203ENST00000587062 BRAPQ7Z569 592 aa22.51■■□□□ 1.19
VAT1-203ENST00000587062 CNNM3Q8NE01 707 aa22.51■■□□□ 1.19
VAT1-203ENST00000587062 SNX29Q8TEQ0 813 aa22.51■■□□□ 1.19
VAT1-203ENST00000587062 AGPAT5Q9NUQ2 364 aa22.51■■□□□ 1.19
VAT1-203ENST00000587062 FAM105AQ9NUU6 356 aa22.51■■□□□ 1.19
VAT1-203ENST00000587062 TYW1Q9NV66 732 aaKnown RBP22.51■■□□□ 1.19
VAT1-203ENST00000587062 PUF60Q9UHX1 559 aaKnown RBP22.51■■□□□ 1.19
VAT1-203ENST00000587062 GTF3C3Q9Y5Q9 886 aa22.51■■□□□ 1.19
VAT1-203ENST00000587062 ARID2Q68CP9 1835 aa22.5■■□□□ 1.19
VAT1-203ENST00000587062 CHD9Q3L8U1 2897 aa22.5■■□□□ 1.19
VAT1-203ENST00000587062 INO80B-WBP1J3KQ70 363 aa22.5■■□□□ 1.19
VAT1-203ENST00000587062 BMP15O95972 392 aa22.5■■□□□ 1.19
VAT1-203ENST00000587062 GATMP50440 423 aa22.5■■□□□ 1.19
VAT1-203ENST00000587062 PTENP60484 403 aa22.5■■□□□ 1.19
VAT1-203ENST00000587062 THNSL1Q8IYQ7 743 aa22.5■■□□□ 1.19
VAT1-203ENST00000587062 IGSF22Q8N9C0 903 aa22.5■■□□□ 1.19
VAT1-203ENST00000587062 KLHL23Q8NBE8 558 aa22.5■■□□□ 1.19
VAT1-203ENST00000587062 ALG13Q9NP73 1137 aaKnown RBP22.5■■□□□ 1.19
VAT1-203ENST00000587062 XPNPEP1Q9NQW7 623 aa22.5■■□□□ 1.19
VAT1-203ENST00000587062 DNM3Q9UQ16 869 aa22.5■■□□□ 1.19
VAT1-203ENST00000587062 ZNF623O75123 536 aa22.49■■□□□ 1.19
VAT1-203ENST00000587062 LINC00271P0C7V0 271 aa22.49■■□□□ 1.19
VAT1-203ENST00000587062 PPM1AP35813 382 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms