RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 CXCL14O95715 111 aa13.42□□□□□ -0.26
BRCA1-225ENST00000586385 EPCAMP16422 314 aa13.42□□□□□ -0.26
BRCA1-225ENST00000586385 TMOD1P28289 359 aa13.42□□□□□ -0.26
BRCA1-225ENST00000586385 ITIH3Q06033 890 aa13.42□□□□□ -0.26
BRCA1-225ENST00000586385 RARS2Q5T160 578 aaKnown RBP13.42□□□□□ -0.26
BRCA1-225ENST00000586385 ZBTB33Q86T24 672 aa13.42□□□□□ -0.26
BRCA1-225ENST00000586385 UBALD2Q8IYN6 164 aa13.42□□□□□ -0.26
BRCA1-225ENST00000586385 NECTIN4Q96NY8 510 aa13.42□□□□□ -0.26
BRCA1-225ENST00000586385 SH2D3AQ9BRG2 576 aa13.42□□□□□ -0.26
BRCA1-225ENST00000586385 TRAIPQ9BWF2 469 aa13.42□□□□□ -0.26
BRCA1-225ENST00000586385 C6orf50Q9HD87 102 aa13.42□□□□□ -0.26
BRCA1-225ENST00000586385 NR2E1Q9Y466 385 aa13.42□□□□□ -0.26
BRCA1-225ENST00000586385 SAMM50Q9Y512 469 aa13.42□□□□□ -0.26
BRCA1-225ENST00000586385 IRAK3Q9Y616 596 aa13.42□□□□□ -0.26
BRCA1-225ENST00000586385 CHMP2AO43633 222 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 PSMD10O75832 226 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 PHKA2P46019 1235 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 NUBP1P53384 320 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 MTMR3Q13615 1198 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 LONRF3Q496Y0 759 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 MCTP2Q6DN12 878 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 KIAA1841Q6NSI8 718 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 CES5AQ6NT32 575 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 Q6ZUG5 572 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 ZDHHC14Q8IZN3 488 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 VPS52Q8N1B4 723 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 ZNF710Q8N1W2 664 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 NLRP7Q8WX94 980 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 BRF1Q92994 677 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 IGSF21Q96ID5 467 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 RIT2Q99578 217 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 NIFKQ9BYG3 293 aaKnown RBP13.41□□□□□ -0.26
BRCA1-225ENST00000586385 NRDE2Q9H7Z3 1164 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 NRBP2Q9NSY0 501 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 VPS54Q9P1Q0 977 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 LIMD1Q9UGP4 676 aa13.41□□□□□ -0.26
BRCA1-225ENST00000586385 NAP1L2Q9ULW6 460 aaPredicted RBP13.41□□□□□ -0.26
BRCA1-225ENST00000586385 PTPRZ1P23471 2315 aaPredicted RBP13.4□□□□□ -0.26
BRCA1-225ENST00000586385 A0A087WZ62 844 aa13.4□□□□□ -0.26
BRCA1-225ENST00000586385 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.4□□□□□ -0.26
BRCA1-225ENST00000586385 ZC3H11AO75152 810 aaKnown RBP eCLIP13.4□□□□□ -0.26
BRCA1-225ENST00000586385 GALTP07902 379 aa13.4□□□□□ -0.26
BRCA1-225ENST00000586385 CTSAP10619 480 aa13.4□□□□□ -0.26
BRCA1-225ENST00000586385 MTHFRP42898 656 aa13.4□□□□□ -0.26
BRCA1-225ENST00000586385 SLC11A1P49279 550 aa13.4□□□□□ -0.26
BRCA1-225ENST00000586385 ALDH7A1P49419 539 aaKnown RBP13.4□□□□□ -0.26
BRCA1-225ENST00000586385 AFF1P51825 1210 aaKnown RBP13.4□□□□□ -0.26
BRCA1-225ENST00000586385 TBC1D8BQ0IIM8 1120 aa13.4□□□□□ -0.26
BRCA1-225ENST00000586385 CWF19L1Q69YN2 538 aaKnown RBP13.4□□□□□ -0.26
BRCA1-225ENST00000586385 DDX53Q86TM3 631 aaKnown RBP13.4□□□□□ -0.26
BRCA1-225ENST00000586385 CCDC136Q96JN2 1154 aa13.4□□□□□ -0.26
BRCA1-225ENST00000586385 FDXACB1Q9BRP7 624 aaPredicted RBP13.4□□□□□ -0.26
BRCA1-225ENST00000586385 MRPL9Q9BYD2 267 aaKnown RBP13.4□□□□□ -0.26
BRCA1-225ENST00000586385 AGXT2Q9BYV1 514 aa13.4□□□□□ -0.26
BRCA1-225ENST00000586385 CHST12Q9NRB3 414 aa13.4□□□□□ -0.26
BRCA1-225ENST00000586385 TBC1D13Q9NVG8 400 aa13.4□□□□□ -0.26
BRCA1-225ENST00000586385 DACT1Q9NYF0 836 aa13.4□□□□□ -0.26
BRCA1-225ENST00000586385 DNAJB4Q9UDY4 337 aa13.4□□□□□ -0.26
BRCA1-225ENST00000586385 CCDC196A0A1B0GTZ2 297 aa13.39□□□□□ -0.27
BRCA1-225ENST00000586385 GAS7O60861 476 aa13.39□□□□□ -0.27
BRCA1-225ENST00000586385 OFD1O75665 1012 aa13.39□□□□□ -0.27
BRCA1-225ENST00000586385 TDP2O95551 362 aa13.39□□□□□ -0.27
BRCA1-225ENST00000586385 GNA11P29992 359 aa13.39□□□□□ -0.27
BRCA1-225ENST00000586385 NBL1P41271 181 aa13.39□□□□□ -0.27
BRCA1-225ENST00000586385 JAK3P52333 1124 aa13.39□□□□□ -0.27
BRCA1-225ENST00000586385 POLGP54098 1239 aaPredicted RBP13.39□□□□□ -0.27
BRCA1-225ENST00000586385 KRT32Q14532 448 aa13.39□□□□□ -0.27
BRCA1-225ENST00000586385 PTPN14Q15678 1187 aa13.39□□□□□ -0.27
BRCA1-225ENST00000586385 NPY5RQ15761 445 aa13.39□□□□□ -0.27
BRCA1-225ENST00000586385 MTERF2Q49AM1 385 aa13.39□□□□□ -0.27
BRCA1-225ENST00000586385 LRCH2Q5VUJ6 765 aa13.39□□□□□ -0.27
BRCA1-225ENST00000586385 ASTLQ6HA08 431 aaPredicted RBP13.39□□□□□ -0.27
BRCA1-225ENST00000586385 ZNF280BQ86YH2 543 aa13.39□□□□□ -0.27
BRCA1-225ENST00000586385 KSR1Q8IVT5 923 aa13.39□□□□□ -0.27
BRCA1-225ENST00000586385 TDRD5Q8NAT2 981 aaKnown RBP13.39□□□□□ -0.27
BRCA1-225ENST00000586385 CCDC12Q8WUD4 166 aaPredicted RBP13.39□□□□□ -0.27
BRCA1-225ENST00000586385 TMEM169Q96HH4 297 aa13.39□□□□□ -0.27
BRCA1-225ENST00000586385 SCLT1Q96NL6 688 aa13.39□□□□□ -0.27
BRCA1-225ENST00000586385 TEKT3Q9BXF9 490 aa13.39□□□□□ -0.27
BRCA1-225ENST00000586385 GCOM2Q9BZD3 368 aaPredicted RBP13.39□□□□□ -0.27
BRCA1-225ENST00000586385 IRF2BPLQ9H1B7 796 aa13.39□□□□□ -0.27
BRCA1-225ENST00000586385 NCOA5Q9HCD5 579 aaKnown RBP13.39□□□□□ -0.27
BRCA1-225ENST00000586385 DZANK1Q9NVP4 752 aa13.39□□□□□ -0.27
BRCA1-225ENST00000586385 TCEAL9Q9UHQ7 104 aa13.39□□□□□ -0.27
BRCA1-225ENST00000586385 RIF1Q5UIP0 2472 aaKnown RBP13.38□□□□□ -0.27
BRCA1-225ENST00000586385 MYO10Q9HD67 2058 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 MYH9P35579 1960 aaKnown RBP13.38□□□□□ -0.27
BRCA1-225ENST00000586385 PRR23AA6NEV1 266 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 M0R2N6 131 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 PI15O43692 258 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 LILRB3O75022 631 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 ZNF623O75123 536 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 HMGB1P09429 215 aaKnown RBP13.38□□□□□ -0.27
BRCA1-225ENST00000586385 IFNAR1P17181 557 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 NPR3P17342 541 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 SFNP31947 248 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 USP11P51784 963 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 Q4G0T1 1027 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 XKR3Q5GH77 459 aa13.38□□□□□ -0.27
BRCA1-225ENST00000586385 NOMO2Q5JPE7 1267 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms