RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 NAMPTP43490 491 aa15.06■□□□□ 0
VMP1-203ENST00000586245 SMTNP53814 917 aa15.06■□□□□ 0
VMP1-203ENST00000586245 PEX3P56589 373 aa15.06■□□□□ 0
VMP1-203ENST00000586245 CAPSQ13938 189 aa15.06■□□□□ 0
VMP1-203ENST00000586245 FAM26DQ5JW98 314 aa15.06■□□□□ 0
VMP1-203ENST00000586245 ODR4Q5SWX8 454 aa15.06■□□□□ 0
VMP1-203ENST00000586245 LRRC8DQ7L1W4 858 aa15.06■□□□□ 0
VMP1-203ENST00000586245 KSR1Q8IVT5 923 aa15.06■□□□□ 0
VMP1-203ENST00000586245 RNF149Q8NC42 400 aa15.06■□□□□ 0
VMP1-203ENST00000586245 ZNF668Q96K58 619 aaPredicted RBP15.06■□□□□ 0
VMP1-203ENST00000586245 CELF4Q9BZC1 486 aaKnown RBP15.06■□□□□ 0
VMP1-203ENST00000586245 PANK4Q9NVE7 773 aa15.06■□□□□ 0
VMP1-203ENST00000586245 SEL1LQ9UBV2 794 aa15.06■□□□□ 0
VMP1-203ENST00000586245 EVPLQ92817 2033 aa15.05■□□□□ 0
VMP1-203ENST00000586245 A0A087WZ62 844 aa15.05■□□□□ -0
VMP1-203ENST00000586245 PVALEFA0A1B0GWK0 134 aa15.05■□□□□ -0
VMP1-203ENST00000586245 TRIM43BA6NCK2 446 aa15.05■□□□□ -0
VMP1-203ENST00000586245 CCDC169A6NNP5 214 aa15.05■□□□□ -0
VMP1-203ENST00000586245 GPR32O75388 356 aa15.05■□□□□ -0
VMP1-203ENST00000586245 CAPN15O75808 1086 aa15.05■□□□□ -0
VMP1-203ENST00000586245 SMC2O95347 1197 aa15.05■□□□□ -0
VMP1-203ENST00000586245 PRR29P0C7W0 189 aa15.05■□□□□ -0
VMP1-203ENST00000586245 RAG1P15918 1043 aa15.05■□□□□ -0
VMP1-203ENST00000586245 PHKA2P46019 1235 aa15.05■□□□□ -0
VMP1-203ENST00000586245 ZNF131P52739 623 aa15.05■□□□□ -0
VMP1-203ENST00000586245 CRYBB1P53674 252 aaPredicted RBP15.05■□□□□ -0
VMP1-203ENST00000586245 POU5F1BQ06416 359 aa15.05■□□□□ -0
VMP1-203ENST00000586245 MGAT3Q09327 533 aa15.05■□□□□ -0
VMP1-203ENST00000586245 HERC4Q5GLZ8 1057 aaPredicted RBP15.05■□□□□ -0
VMP1-203ENST00000586245 UNC13DQ70J99 1090 aa15.05■□□□□ -0
VMP1-203ENST00000586245 ZBTB8OSQ8IWT0 167 aa15.05■□□□□ -0
VMP1-203ENST00000586245 DEPTORQ8TB45 409 aa15.05■□□□□ -0
VMP1-203ENST00000586245 BSNDQ8WZ55 320 aa15.05■□□□□ -0
VMP1-203ENST00000586245 TRIM43Q96BQ3 446 aaPredicted RBP15.05■□□□□ -0
VMP1-203ENST00000586245 OSMRQ99650 979 aa15.05■□□□□ -0
VMP1-203ENST00000586245 FDXACB1Q9BRP7 624 aaPredicted RBP15.05■□□□□ -0
VMP1-203ENST00000586245 GCOM2Q9BZD3 368 aaPredicted RBP15.05■□□□□ -0
VMP1-203ENST00000586245 INO80BQ9C086 356 aaPredicted RBP15.05■□□□□ -0
VMP1-203ENST00000586245 C2orf40Q9H1Z8 148 aa15.05■□□□□ -0
VMP1-203ENST00000586245 ADAMTS10Q9H324 1103 aa15.05■□□□□ -0
VMP1-203ENST00000586245 CLSTN2Q9H4D0 955 aa15.05■□□□□ -0
VMP1-203ENST00000586245 KMT5AQ9NQR1 393 aa15.05■□□□□ -0
VMP1-203ENST00000586245 NR2E3Q9Y5X4 410 aa15.05■□□□□ -0
VMP1-203ENST00000586245 PARNO95453 639 aaKnown RBP15.04■□□□□ -0
VMP1-203ENST00000586245 TIMP1P01033 207 aa15.04■□□□□ -0
VMP1-203ENST00000586245 CHRNA1P02708 482 aa15.04■□□□□ -0
VMP1-203ENST00000586245 RPN1P04843 607 aaKnown RBP15.04■□□□□ -0
VMP1-203ENST00000586245 CYP2C18P33260 490 aa15.04■□□□□ -0
VMP1-203ENST00000586245 NPTX2P47972 431 aa15.04■□□□□ -0
VMP1-203ENST00000586245 CCL23P55773 120 aa15.04■□□□□ -0
VMP1-203ENST00000586245 MDM2Q00987 491 aaPredicted RBP15.04■□□□□ -0
VMP1-203ENST00000586245 DPYDQ12882 1025 aa15.04■□□□□ -0
VMP1-203ENST00000586245 COASYQ13057 564 aa15.04■□□□□ -0
VMP1-203ENST00000586245 PNOCQ13519 176 aa15.04■□□□□ -0
VMP1-203ENST00000586245 SRGAP1Q7Z6B7 1085 aa15.04■□□□□ -0
VMP1-203ENST00000586245 SFR1Q86XK3 245 aa15.04■□□□□ -0
VMP1-203ENST00000586245 FAM178BQ8IXR5 827 aa15.04■□□□□ -0
VMP1-203ENST00000586245 SLC17A8Q8NDX2 589 aa15.04■□□□□ -0
VMP1-203ENST00000586245 SPIRE2Q8WWL2 714 aa15.04■□□□□ -0
VMP1-203ENST00000586245 NUP62CLQ9H1M0 184 aa15.04■□□□□ -0
VMP1-203ENST00000586245 EXOC1Q9NV70 894 aa15.04■□□□□ -0
VMP1-203ENST00000586245 UMODL1Q5DID0 1318 aa15.03■□□□□ -0
VMP1-203ENST00000586245 PHLPP2Q6ZVD8 1323 aa15.03■□□□□ -0
VMP1-203ENST00000586245 FRMD3A2A2Y4 597 aa15.03■□□□□ -0
VMP1-203ENST00000586245 H0YCG3 227 aa15.03■□□□□ -0
VMP1-203ENST00000586245 TRAK2O60296 914 aa15.03■□□□□ -0
VMP1-203ENST00000586245 IQCF3P0C7M6 154 aa15.03■□□□□ -0
VMP1-203ENST00000586245 DARSP14868 501 aaKnown RBP15.03■□□□□ -0
VMP1-203ENST00000586245 PTENP60484 403 aa15.03■□□□□ -0
VMP1-203ENST00000586245 NFKBIBQ15653 356 aa15.03■□□□□ -0
VMP1-203ENST00000586245 CAMK4Q16566 473 aa15.03■□□□□ -0
VMP1-203ENST00000586245 SKOR2Q2VWA4 1001 aaPredicted RBP15.03■□□□□ -0
VMP1-203ENST00000586245 TMEM199Q8N511 208 aa15.03■□□□□ -0
VMP1-203ENST00000586245 USP38Q8NB14 1042 aa15.03■□□□□ -0
VMP1-203ENST00000586245 SMARCE1Q969G3 411 aa15.03■□□□□ -0
VMP1-203ENST00000586245 NFKBIZQ9BYH8 718 aa15.03■□□□□ -0
VMP1-203ENST00000586245 MRPL44Q9H9J2 332 aaKnown RBP15.03■□□□□ -0
VMP1-203ENST00000586245 CDHR5Q9HBB8 845 aa15.03■□□□□ -0
VMP1-203ENST00000586245 RMND1Q9NWS8 449 aa15.03■□□□□ -0
VMP1-203ENST00000586245 MKI67P46013 3256 aaKnown RBP15.02■□□□□ -0
VMP1-203ENST00000586245 ALPK3Q96L96 1907 aa15.02■□□□□ -0
VMP1-203ENST00000586245 INO80B-WBP1J3KQ70 363 aa15.02■□□□□ -0
VMP1-203ENST00000586245 K7ENM7 598 aa15.02■□□□□ -0
VMP1-203ENST00000586245 SLC16A4O15374 487 aa15.02■□□□□ -0
VMP1-203ENST00000586245 KLRC4O43908 158 aa15.02■□□□□ -0
VMP1-203ENST00000586245 RPS6KA5O75582 802 aa15.02■□□□□ -0
VMP1-203ENST00000586245 MAPTP10636 758 aaKnown RBP15.02■□□□□ -0
VMP1-203ENST00000586245 GHRP10912 638 aa15.02■□□□□ -0
VMP1-203ENST00000586245 SCP2P22307 547 aa15.02■□□□□ -0
VMP1-203ENST00000586245 EIF4BP23588 611 aaKnown RBP15.02■□□□□ -0
VMP1-203ENST00000586245 ABCD1P33897 745 aa15.02■□□□□ -0
VMP1-203ENST00000586245 RFC2P35250 354 aa15.02■□□□□ -0
VMP1-203ENST00000586245 EFNA5P52803 228 aa15.02■□□□□ -0
VMP1-203ENST00000586245 NCKAP1LP55160 1127 aa15.02■□□□□ -0
VMP1-203ENST00000586245 KMT5BQ4FZB7 885 aa15.02■□□□□ -0
VMP1-203ENST00000586245 FBXO47Q5MNV8 452 aa15.02■□□□□ -0
VMP1-203ENST00000586245 CDCA2Q69YH5 1023 aaPredicted RBP15.02■□□□□ -0
VMP1-203ENST00000586245 TRAF7Q6Q0C0 670 aa15.02■□□□□ -0
VMP1-203ENST00000586245 IFNLR1Q8IU57 520 aaPredicted RBP15.02■□□□□ -0
VMP1-203ENST00000586245 SYAP1Q96A49 352 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms