RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 CRACR2AQ9BSW2 395 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 GABBR1Q9UBS5 961 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 KCNH4Q9UQ05 1017 aa12.31□□□□□ -0.44
LIG3-204ENST00000585740 THSD7BQ9C0I4 1608 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 A0A0U1RQJ8 604 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 DGAT1O75907 488 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 GFPT2O94808 682 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 SUPT20HL2P0C7V6 817 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 CCDC172P0C7W6 258 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 UCHL3P15374 230 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 ERCC3P19447 782 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 OSBPP22059 807 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 FMO5P49326 533 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 CKAP4Q07065 602 aaKnown RBP12.3□□□□□ -0.44
LIG3-204ENST00000585740 KLHL30Q0D2K2 578 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 CETN1Q12798 172 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 DMP1Q13316 513 aaPredicted RBP12.3□□□□□ -0.44
LIG3-204ENST00000585740 FAM102BQ5T8I3 360 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 CST9Q5W186 159 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 HGSNATQ68CP4 663 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 FASTKD5Q7L8L6 764 aaKnown RBP12.3□□□□□ -0.44
LIG3-204ENST00000585740 ARMC9Q7Z3E5 817 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 HAUS6Q7Z4H7 955 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 VPS36Q86VN1 386 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 GPR161Q8N6U8 529 aaKnown RBP12.3□□□□□ -0.44
LIG3-204ENST00000585740 GTF3C2Q8WUA4 911 aaPredicted RBP12.3□□□□□ -0.44
LIG3-204ENST00000585740 ATRIPQ8WXE1 791 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 CDCA5Q96FF9 252 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 CEP170P1Q96L14 293 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 ALS2CR12Q96Q35 445 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 SPATC1LQ9H0A9 340 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 BCAS3Q9H6U6 928 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 ELP3Q9H9T3 547 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 POLD4Q9HCU8 107 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 GCNT4Q9P109 453 aa12.3□□□□□ -0.44
LIG3-204ENST00000585740 MYH10P35580 1976 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 LOC102724159A0A0B4J2E5 919 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 UNCXA6NJT0 531 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 TUBBP07437 444 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 PLEKP08567 350 aaPredicted RBP12.29□□□□□ -0.44
LIG3-204ENST00000585740 FERP16591 822 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 SLC9A1P19634 815 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 MAP2K2P36507 400 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 PRKCIP41743 596 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 CYP2J2P51589 502 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 ALDH5A1P51649 535 aaPredicted RBP12.29□□□□□ -0.44
LIG3-204ENST00000585740 ACTR2P61160 394 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 ENPEPQ07075 957 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 BFSP1Q12934 665 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 PWP2Q15269 919 aaKnown RBP12.29□□□□□ -0.44
LIG3-204ENST00000585740 SLC18A3Q16572 532 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 ERCC6LQ2NKX8 1250 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 XKR3Q5GH77 459 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 TREML2Q5T2D2 321 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 PAPD7Q5XG87 772 aaKnown RBP12.29□□□□□ -0.44
LIG3-204ENST00000585740 DPY19L2P1Q6NXN4 242 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 ABHD15Q6UXT9 468 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 RSRC2Q7L4I2 434 aaKnown RBP12.29□□□□□ -0.44
LIG3-204ENST00000585740 TRAPPC11Q7Z392 1133 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 XXYLT1Q8NBI6 393 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 RPGRIP1Q96KN7 1286 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 IFT74Q96LB3 600 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 ATP6V0A4Q9HBG4 840 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.29□□□□□ -0.44
LIG3-204ENST00000585740 AGTPBP1Q9UPW5 1226 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 PPME1Q9Y570 386 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 V9GYY5 206 aaPredicted RBP12.29□□□□□ -0.44
LIG3-204ENST00000585740 IGSF9BQ9UPX0 1349 aa12.29□□□□□ -0.44
LIG3-204ENST00000585740 TNRC18O15417 2968 aaPredicted RBP12.29□□□□□ -0.44
LIG3-204ENST00000585740 CTAGE15A4D2H0 777 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 ZNF263O14978 683 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 PMM2O15305 246 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 TLR2O60603 784 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 RGS20O76081 388 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 ATG7O95352 703 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 CTAGE8P0CG41 777 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 TGFB3P10600 412 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 EDNRBP24530 442 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 STAT1P42224 750 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 PEX3P56589 373 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 CHMP4BP1P59074 171 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 MCCD1P59942 119 aaPredicted RBP12.28□□□□□ -0.44
LIG3-204ENST00000585740 AMPD2Q01433 879 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 MYL7Q01449 175 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 CYP27A1Q02318 531 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 TTLL12Q14166 644 aaPredicted RBP12.28□□□□□ -0.44
LIG3-204ENST00000585740 NEDD9Q14511 834 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 NAA30Q147X3 362 aaPredicted RBP12.28□□□□□ -0.44
LIG3-204ENST00000585740 UTP14CQ5TAP6 766 aaKnown RBP12.28□□□□□ -0.44
LIG3-204ENST00000585740 PLA2G4FQ68DD2 849 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 SWSAP1Q6NVH7 229 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 KCNV1Q6PIU1 500 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 ANO5Q75V66 913 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 MAEAQ7L5Y9 396 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 USP37Q86T82 979 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 CTAGE6Q86UF2 777 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 CTAGE4Q8IX94 777 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 KCNN1Q92952 543 aa12.28□□□□□ -0.44
LIG3-204ENST00000585740 NTPCRQ9BSD7 190 aaKnown RBP12.28□□□□□ -0.44
LIG3-204ENST00000585740 LACRTQ9GZZ8 138 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms