RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 HCFC2Q9Y5Z7 792 aa16.32■□□□□ 0.2
SDF2-202ENST00000585428 CYP3A7-CYP3A51PA0A087WV96 503 aa16.31■□□□□ 0.2
SDF2-202ENST00000585428 GAS7O60861 476 aa16.31■□□□□ 0.2
SDF2-202ENST00000585428 CLASP2O75122 1294 aaKnown RBP16.31■□□□□ 0.2
SDF2-202ENST00000585428 CXCL14O95715 111 aa16.31■□□□□ 0.2
SDF2-202ENST00000585428 RPS6KB1P23443 525 aa16.31■□□□□ 0.2
SDF2-202ENST00000585428 CYP3A7P24462 503 aa16.31■□□□□ 0.2
SDF2-202ENST00000585428 ALDH7A1P49419 539 aaKnown RBP16.31■□□□□ 0.2
SDF2-202ENST00000585428 JAK3P52333 1124 aa16.31■□□□□ 0.2
SDF2-202ENST00000585428 BCAR1P56945 870 aa16.31■□□□□ 0.2
SDF2-202ENST00000585428 ITIH3Q06033 890 aa16.31■□□□□ 0.2
SDF2-202ENST00000585428 TBC1D8BQ0IIM8 1120 aa16.31■□□□□ 0.2
SDF2-202ENST00000585428 SMC1AQ14683 1233 aaKnown RBP16.31■□□□□ 0.2
SDF2-202ENST00000585428 TPRNQ4KMQ1 711 aa16.31■□□□□ 0.2
SDF2-202ENST00000585428 LRCH2Q5VUJ6 765 aa16.31■□□□□ 0.2
SDF2-202ENST00000585428 CENPQQ7L2Z9 268 aaPredicted RBP16.31■□□□□ 0.2
SDF2-202ENST00000585428 RNF169Q8NCN4 708 aa16.31■□□□□ 0.2
SDF2-202ENST00000585428 CCDC148Q8NFR7 591 aa16.31■□□□□ 0.2
SDF2-202ENST00000585428 RDM1Q8NG50 284 aa16.31■□□□□ 0.2
SDF2-202ENST00000585428 RIPOR3Q96MK2 946 aa16.31■□□□□ 0.2
SDF2-202ENST00000585428 VPS54Q9P1Q0 977 aa16.31■□□□□ 0.2
SDF2-202ENST00000585428 EVPLQ92817 2033 aa16.31■□□□□ 0.2
SDF2-202ENST00000585428 NT5C1B-RDH14C9J2C7 533 aa16.3■□□□□ 0.2
SDF2-202ENST00000585428 M0R2N6 131 aa16.3■□□□□ 0.2
SDF2-202ENST00000585428 PHKA2P46019 1235 aa16.3■□□□□ 0.2
SDF2-202ENST00000585428 VCPP55072 806 aaKnown RBP16.3■□□□□ 0.2
SDF2-202ENST00000585428 XKR3Q5GH77 459 aa16.3■□□□□ 0.2
SDF2-202ENST00000585428 TBCKQ8TEA7 893 aa16.3■□□□□ 0.2
SDF2-202ENST00000585428 NLRP7Q8WX94 980 aa16.3■□□□□ 0.2
SDF2-202ENST00000585428 RSPH1Q8WYR4 309 aa16.3■□□□□ 0.2
SDF2-202ENST00000585428 TEKT3Q9BXF9 490 aa16.3■□□□□ 0.2
SDF2-202ENST00000585428 SLC26A6Q9BXS9 759 aa16.3■□□□□ 0.2
SDF2-202ENST00000585428 GCOM2Q9BZD3 368 aaPredicted RBP16.3■□□□□ 0.2
SDF2-202ENST00000585428 CDH22Q9UJ99 828 aa16.3■□□□□ 0.2
SDF2-202ENST00000585428 NR2E1Q9Y466 385 aa16.3■□□□□ 0.2
SDF2-202ENST00000585428 IRAK3Q9Y616 596 aa16.3■□□□□ 0.2
SDF2-202ENST00000585428 A0A087WZ62 844 aa16.29■□□□□ 0.2
SDF2-202ENST00000585428 CHMP2AO43633 222 aa16.29■□□□□ 0.2
SDF2-202ENST00000585428 ZNF623O75123 536 aa16.29■□□□□ 0.2
SDF2-202ENST00000585428 NLRP5P59047 1200 aa16.29■□□□□ 0.2
SDF2-202ENST00000585428 CES5AQ6NT32 575 aa16.29■□□□□ 0.2
SDF2-202ENST00000585428 MBOAT7Q96N66 472 aa16.29■□□□□ 0.2
SDF2-202ENST00000585428 NECTIN4Q96NY8 510 aa16.29■□□□□ 0.2
SDF2-202ENST00000585428 FDXACB1Q9BRP7 624 aaPredicted RBP16.29■□□□□ 0.2
SDF2-202ENST00000585428 MRPL9Q9BYD2 267 aaKnown RBP16.29■□□□□ 0.2
SDF2-202ENST00000585428 POMKQ9H5K3 350 aa16.29■□□□□ 0.2
SDF2-202ENST00000585428 NCOA5Q9HCD5 579 aaKnown RBP16.29■□□□□ 0.2
SDF2-202ENST00000585428 USP34Q70CQ2 3546 aa16.28■□□□□ 0.2
SDF2-202ENST00000585428 TMEM150BA6NC51 233 aa16.28■□□□□ 0.2
SDF2-202ENST00000585428 MAFO75444 373 aaPredicted RBP16.28■□□□□ 0.2
SDF2-202ENST00000585428 SKIP12755 728 aa16.28■□□□□ 0.2
SDF2-202ENST00000585428 DNM2P50570 870 aa16.28■□□□□ 0.2
SDF2-202ENST00000585428 NUBP1P53384 320 aa16.28■□□□□ 0.2
SDF2-202ENST00000585428 POLGP54098 1239 aaPredicted RBP16.28■□□□□ 0.2
SDF2-202ENST00000585428 CCT2P78371 535 aaKnown RBP16.28■□□□□ 0.2
SDF2-202ENST00000585428 MIER3Q7Z3K6 550 aa16.28■□□□□ 0.2
SDF2-202ENST00000585428 DDX53Q86TM3 631 aaKnown RBP16.28■□□□□ 0.2
SDF2-202ENST00000585428 VPS52Q8N1B4 723 aa16.28■□□□□ 0.2
SDF2-202ENST00000585428 KREMEN2Q8NCW0 462 aa16.28■□□□□ 0.2
SDF2-202ENST00000585428 SLC22A17Q8WUG5 538 aa16.28■□□□□ 0.2
SDF2-202ENST00000585428 SCLT1Q96NL6 688 aa16.28■□□□□ 0.2
SDF2-202ENST00000585428 SH2D3AQ9BRG2 576 aa16.28■□□□□ 0.2
SDF2-202ENST00000585428 C22orf23Q9BZE7 217 aa16.28■□□□□ 0.2
SDF2-202ENST00000585428 INO80BQ9C086 356 aaPredicted RBP16.28■□□□□ 0.2
SDF2-202ENST00000585428 PCDHA4Q9UN74 947 aa16.28■□□□□ 0.2
SDF2-202ENST00000585428 C2CD4DB7Z1M9 353 aa16.27■□□□□ 0.2
SDF2-202ENST00000585428 OFD1O75665 1012 aa16.27■□□□□ 0.2
SDF2-202ENST00000585428 PDGFBP01127 241 aaPredicted RBP16.27■□□□□ 0.2
SDF2-202ENST00000585428 GALTP07902 379 aa16.27■□□□□ 0.2
SDF2-202ENST00000585428 SP100P23497 879 aaPredicted RBP16.27■□□□□ 0.2
SDF2-202ENST00000585428 PSMA5P28066 241 aa16.27■□□□□ 0.2
SDF2-202ENST00000585428 GIT2Q14161 759 aa16.27■□□□□ 0.2
SDF2-202ENST00000585428 BMS1Q14692 1282 aaKnown RBP16.27■□□□□ 0.2
SDF2-202ENST00000585428 NPY5RQ15761 445 aa16.27■□□□□ 0.2
SDF2-202ENST00000585428 MTERF2Q49AM1 385 aa16.27■□□□□ 0.2
SDF2-202ENST00000585428 ANO5Q75V66 913 aa16.27■□□□□ 0.2
SDF2-202ENST00000585428 ZNF410Q86VK4 478 aa16.27■□□□□ 0.2
SDF2-202ENST00000585428 TMEM173Q86WV6 379 aaPredicted RBP16.27■□□□□ 0.2
SDF2-202ENST00000585428 UBALD2Q8IYN6 164 aa16.27■□□□□ 0.2
SDF2-202ENST00000585428 ETNPPLQ8TBG4 499 aa16.27■□□□□ 0.2
SDF2-202ENST00000585428 IGSF21Q96ID5 467 aa16.27■□□□□ 0.2
SDF2-202ENST00000585428 ZBP1Q9H171 429 aa16.27■□□□□ 0.2
SDF2-202ENST00000585428 IRF2BPLQ9H1B7 796 aa16.27■□□□□ 0.2
SDF2-202ENST00000585428 NRDE2Q9H7Z3 1164 aa16.27■□□□□ 0.2
SDF2-202ENST00000585428 SUCLA2Q9P2R7 463 aaPredicted RBP16.27■□□□□ 0.2
SDF2-202ENST00000585428 SORCS3Q9UPU3 1222 aa16.27■□□□□ 0.2
SDF2-202ENST00000585428 CARNS1A5YM72 827 aa16.26■□□□□ 0.19
SDF2-202ENST00000585428 MEIS3P2A8K0S8 358 aa16.26■□□□□ 0.19
SDF2-202ENST00000585428 DDX11L8A8MPP1 907 aa16.26■□□□□ 0.19
SDF2-202ENST00000585428 ST18O60284 1047 aa16.26■□□□□ 0.19
SDF2-202ENST00000585428 TDP2O95551 362 aa16.26■□□□□ 0.19
SDF2-202ENST00000585428 BRD1O95696 1058 aa16.26■□□□□ 0.19
SDF2-202ENST00000585428 CTSAP10619 480 aa16.26■□□□□ 0.19
SDF2-202ENST00000585428 MTHFRP42898 656 aa16.26■□□□□ 0.19
SDF2-202ENST00000585428 TOB2Q14106 344 aaPredicted RBP16.26■□□□□ 0.19
SDF2-202ENST00000585428 NOMO2Q5JPE7 1267 aa16.26■□□□□ 0.19
SDF2-202ENST00000585428 KANK3Q6NY19 840 aa16.26■□□□□ 0.19
SDF2-202ENST00000585428 MOXD1Q6UVY6 613 aa16.26■□□□□ 0.19
SDF2-202ENST00000585428 ZDHHC14Q8IZN3 488 aa16.26■□□□□ 0.19
SDF2-202ENST00000585428 BLIDQ8IZY5 108 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms